Information report for AT4G28980
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Genome-wide analysis of core cell cycle genes in Arabidopsis. DOI: 10.1105/tpc.010445 ; PMID: 11971144
- High-throughput protein localization in Arabidopsis using Agrobacterium-mediated transient expression of GFP-ORF fusions. DOI: 10.1111/j.1365-313X.2004.02281.x ; PMID: 15610358
- Control of cell division and transcription by cyclin-dependent kinase-activating kinases in plants. DOI: 10.1093/pcp/pci170 ; PMID: 16024551
- A tandem affinity purification-based technology platform to study the cell cycle interactome in Arabidopsis thaliana. DOI: 10.1074/mcp.M700078-MCP200 ; PMID: 17426018
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
- The Arabidopsis cyclin-dependent kinase-activating kinase CDKF;1 is a major regulator of cell proliferation and cell expansion but is dispensable for CDKA activation. DOI: 10.1111/j.1365-313X.2009.03884.x ; PMID: 19368694
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. DOI: 10.1038/msb.2010.53 ; PMID: 20706207
- Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system. DOI: 10.1016/j.phytochem.2011.02.029 ; PMID: 21477822
- CDKF;1 and CDKD protein kinases regulate phosphorylation of serine residues in the C-terminal domain of Arabidopsis RNA polymerase II. DOI: 10.1105/tpc.112.096834 ; PMID: 22547781
- Cyclin-dependent kinase-activating kinases CDKD;1 and CDKD;3 are essential for preserving mitotic activity in Arabidopsis thaliana. DOI: 10.1111/tpj.12872 ; PMID: 25942995
- Gene modification by fast-track recombineering for cellular localization and isolation of components of plant protein complexes. DOI: 10.1111/tpj.14450 ; PMID: 31276249
- Global analysis of the core cell cycle regulators of Arabidopsis identifies novel genes, reveals multiple and highly specific profiles of expression and provides a coherent model for plant cell cycle control. DOI: 10.1111/j.1365-313X.2004.02319.x ; PMID: 15686519
- Control of cell division and transcription by cyclin-dependent kinase-activating kinases in plants. DOI: 10.1093/pcp/pci170 ; PMID: 16024551
- Diverse phosphoregulatory mechanisms controlling cyclin-dependent kinase-activating kinases in Arabidopsis. DOI: 10.1111/j.1365-313X.2006.02820.x ; PMID: 16856985
- A tandem affinity purification-based technology platform to study the cell cycle interactome in Arabidopsis thaliana. DOI: 10.1074/mcp.M700078-MCP200 ; PMID: 17426018
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
- Global analysis of the core cell cycle regulators of Arabidopsis identifies novel genes, reveals multiple and highly specific profiles of expression and provides a coherent model for plant cell cycle control. DOI: 10.1111/j.1365-313X.2004.02319.x ; PMID: 15686519
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
Gene Resources
- UniProt: B9DFZ7
- EMBL: AK316966
- AlphaFoldDB: B9DFZ7
- EnsemblPlants: AT4G28980.1, AT4G28980.2, AT4G28980.3
- Gramene: AT4G28980.1, AT4G28980.2, AT4G28980.3
- KEGG: ath:AT4G28980
- Orthologous matrix: WSIHTRR
- ExpressionAtlas: AT4G28980
- InterPro: IPR000719, IPR008271, IPR011009
- PANTHER: PTHR24056, PTHR24056:SF171
- SUPFAM: SSF56112
- PROSITE: PS00107, PS00108, PS50011
- Gene3D: 1.10.510.10, 3.30.200.20
- OrthoDB: B9DFZ7
- SWISS-MODEL: B9DFZ7
Sequences
cDNA Sequence
- >AT4G28980.2
GATTTTTAAACTGGTGAATTCGTTAGCGTTTATGTGAATAATCATCCATCATCAGGAAAGATCCGAAGAAAAGCGACGCCGTTTTAAAGGAGATGGATAAACAACCGGCGACCAGTTGGAGTATCCATACCCGGCCGGAGATAATCGCCAAGTACGAGATCTTCGAGCGAGTCGGATCCGGAGCTTACGCCGACGTTTACAGAGCTCGCCGTCTCTCCGACGGTCTAATCGTCGCGCTCAAGGAGATTTTCGATTACCAATCTGCGTTCCGGGAGATTGACGCGCTCACCATCCTCAATGGATCTCCTAATGTAGTTGTTATGCACGAATACTTCTGGCGTGAGGAAGAGAACGCTGTGCTTGTGCTTGAGTTTCTTAGGTCGGATCTCGCTGCGGTGATCCGAGATGGTAAGAGGAAGAAGAAGGTAGAAGGAGGGGATGGATTCTCGGTTGGGGAGATTAAGAGATGGATGATTCAGATTTTAACCGGTGTTGATGCTTGTCATCGGAATTTGATTGTACATAGAGATTTGAAGCCTGGGAATATGTTGATTTCTGATGATGGAGTTCTTAAGCTTGCTGATTTTGGTCAGGCTAGGATACTCATGGAGCATGATATTGTAGCTTCAGATGAAAACCAACAAGCTTACAAACTGGAAGACAAAGATGGAGAAACCAGCGAACCACCAGAAGTTATTCCTGATTATGAGAACTCACCTAGGCAAGGGTCTGATGGTCAGGAACGGGAAGCGATGAGTAAAGACGAGTACTTCCGACAGGTGGAAGAGCTCAAGGCTAAACAGGTTGTTAGAGATGATACTGATAAGGACTCGAATGTGCATGATGGAGACATATCTTGCCTTGCAACGTGCACTGTTAGTGAAATGGATGATGATCTCGGTAGGAACTCGTTTTCTTACGATGCTGACGAAGCAGTGGATGATACACAGGGTTTGATGACATCTTGTGTGGGAACCCGATGGTTTAGGCCACCAGAACTGCTCTATGGATCTACGATGTATGGGTTAGAGGTCGATCTATGGTCGCTTGGTTGTGTGTTTGCAGAACTCTTGTCTCTTGAGCCTTTGTTCCCAGGAATTTCAGATATTGATCAGATCAGCAGAGTGACCAATGTGCTGGGAAATTTAAATGAAGAGGTCTGGCCTGGTTGTGTTGATCTTCCAGACTACAAGTCAATCTCATTTGCTAAAGTAGAATCTCCTCTTGGTATTGAAGGATGCCTTCCCAACCATTCAGGGGATGTGATATCGCTGCTCAAGAAGCTTATCTGTTATGATCCAGCTAGTAGAGCTACTACTATGGAGATGCTGAATGACAAATATTTAAGTGAAGAGCCTCTTCCAGTTCCAGTTTCAGAGCTCTATGTGCCTCCGACAATGAGTGGACCAGATGAGGATTCTCCGAGAAAGTGGAATGATTACAGAGAAATGGATTCAGATTCAGATTTTGATGGCTTTGGACCCATGAATGTAAAGCCTACCAGTAGTGGATTTACAATAGAATTCCCCTGACCTTGGCATTTAAGGTACGCAGTCAAAAGCTCTGGCTCGCTTAAACACATAAATCAGTCTCTTCTCTCTCTCTCTTTCTTCTTCAAAGAGAATGGGTATATACCAAAACCTGACATGTGTTTCTTTAGGTCTTGATTGATGCAACACTCTTTGTTGTTTGAAGATCTTGTTACAGAATACCGCTTAGAAAATTGTTAACTTTTCGTTAGGACATTGTTTAGGTATCAATGGCGGCAAAAACTTTTGAAATTCGTTTGCTCATTGATCTCACAACTTTTTTTTGCGCTTTGTTTCTCTCATCGATCTCAGTTTTATGTGTTTATCTCTCCTTGGCAGAGTCCATGGTTGAGCATCTTGATCATCCCGACTTCCCCTGAATTCGCCTACTTTGTCAAAAATGTGTTGTGTGTGTGTGTGTGTTGTTCCTCTCTCTCTGCCTCCCTCGTATGAAAATGGTAACATTTACAATTGGAAAGTCGGTGTTAGCCTTTAGCTATTAGCTGAAGAGCTAGTTTTCTTGTTGCCCAGGCCATTCTTTACCCTATTTTTCATCTGAAGTAACAATGAAACAAAATCTATATATACTCGAGTTTTGCTTTCTAGGATCTGTATTTCTTAATTGTTTCTATATTTTGATCAATTTTGAACTTTTCATATCAAGTTATCAACATGTGTAGTAGCAACCCTTCAATAATGAGACCATGGAATAAAAGCCTA - >AT4G28980.1
GATTTTTAAACTGGTGAATTCGTTAGCGTTTATGTGAATAATCATCCATCATCAGGAAAGATCCGAAGAAAAGCGACGCCGTTTTAAAGGAGATGGATAAACAACCGGCGACCAGTTGGAGTATCCATACCCGGCCGGAGATAATCGCCAAGTACGAGATCTTCGAGCGAGTCGGATCCGGAGCTTACGCCGACGTTTACAGAGCTCGCCGTCTCTCCGACGGTCTAATCGTCGCGCTCAAGGAGATTTTCGATTACCAATCTGCGTTCCGGGAGATTGACGCGCTCACCATCCTCAATGGATCTCCTAATGTAGTTGTTATGCACGAATACTTCTGGCGTGAGGAAGAGAACGCTGTGCTTGTGCTTGAGTTTCTTAGGTCGGATCTCGCTGCGGTGATCCGAGATGGTAAGAGGAAGAAGAAGGTAGAAGGAGGGGATGGATTCTCGGTTGGGGAGATTAAGAGATGGATGATTCAGATTTTAACCGGTGTTGATGCTTGTCATCGGAATTTGATTGTACATAGAGATTTGAAGCCTGGGAATATGTTGATTTCTGATGATGGAGTTCTTAAGCTTGCTGATTTTGGTCAGGCTAGGATACTCATGGAGCATGATATTGTAGCTTCAGATGAAAACCAACAAGCTTACAAACTGGAAGACAAAGATGGAGAAACCAGCGAACCACCAGAAGTTATTCCTGATTATGAGAACTCACCTAGGCAAGGGTCTGATGGTCAGGAACGGGAAGCGATGAGTAAAGACGAGTACTTCCGACAGGTGGAAGAGCTCAAGGCTAAACAGGTTGTTAGAGATGATACTGATAAGGACTCGAATGTGCATGATGGAGACATATCTTGCCTTGCAACGTGCACTGTTAGTGAAATGGATGATGATCTCGGTAGGAACTCGTTTTCTTACGATGCTGACGAAGCAGTGGATGATACACAGGGTTTGATGACATCTTGTGTGGGAACCCGATGGTTTAGGCCACCAGAACTGCTCTATGGATCTACGATGTATGGGTTAGAGGTCGATCTATGGTCGCTTGGTTGTGTGTTTGCAGAACTCTTGTCTCTTGAGCCTTTGTTCCCAGGAATTTCAGATATTGATCAGATCAGCAGAGTGACCAATGTGCTGGGAAATTTAAATGAAGAGGTCTGGCCTGGTTGTGTTGATCTTCCAGACTACAAGTCAATCTCATTTGCTAAAGTAGAATCTCCTCTTGGTATTGAAGGATGCCTTCCCAACCATTCAGGGGATGTGATATCGCTGCTCAAGAAGCTTATCTGTTATGATCCAGCTAGTAGAGCTACTACTATGGAGATGCTGAATGACAAATATTTAAGTGAAGAGCCTCTTCCAGTTCCAGTTTCAGAGCTCTATGTGCCTCCGACAATGAGTGGACCAGATGAGGATTCTCCGAGAAAGTGGAATGATTACAGAGAAATGGATTCAGATTCAGATTTTGATGGCTTTGGACCCATGAATGTAAAGCCTACCAGTAGTGGATTTACAATAGAATTCCCCTGACCTTGGCATTTAAGGTACGCAGTCAAAAGCTCTGGCTCGCTTAAACACATAAATCAGTCTCTTCTCTCTCTCTCTTTCTTCTTCAAAGAGAATGGGTATATACCAAAACCTGACATGTGTTTCTTTAGGTCTTGATTGATGCAACACTCTTTGTTGTTTGAAGATCTTGTTACAGAATACCGCTTAGAAAATTGTTAACTTTTCGTTAGGACATTGTTTAGGTATCAATGGCGGCAAAAACTTTTGAAATTCGTTTGCTCATTGATCTCACAACTTTTTTTTGCGCTTTGTTTCTCTCATCGATCTCAGTTTTATGTGTTTATCTCTCCTTGGCAGAGTCCATGGTTGAGCATCTTGATCATCCCGACTTCCCCTGAATTCGCCTACTTTGTCAAAAATGTGTTGTGTGTGTGTGTGTGTTGTTCCTCTCTCTCTGCCTCCCTCGTATGAAAATGGTAACATTTACAATTGGAAAGTCGGTGTTAGCCTTTAGCTATTAGCTGAAGAGCTAGTTTTCTTGTTGCCCAGGCCATTCTTTACCCTATTTTTCATCTGAAGTAACAATGAAACAAAATCTATATATACTCGAGTTTTGCTTTCTAGGATCTGTATTTCTTAATTGTTTCTATATTTTGATCAATTTTGAACTTTTCATATCAAGTTATCAACATGTGTAGTAGCAACCCTTCAATAATGAGACCATGGAATAAAAGCCTA - >AT4G28980.3
GATTTTTAAACTGGTGAATTCGTTAGCGTTTATGTGAATAATCATCCATCATCAGGAAAGATCCGAAGAAAAGCGACGCCGTTTTAAAGGAGATGGATAAACAACCGGCGACCAGTTGGAGTATCCATACCCGGCCGGAGATAATCGCCAAGTACGAGATCTTCGAGCGAGTCGGATCCGGAGCTTACGCCGACGTTTACAGAGCTCGCCGTCTCTCCGACGGTCTAATCGTCGCGCTCAAGGAGATTTTCGATTACCAATCTGCGTTCCGGGAGATTGACGCGCTCACCATCCTCAATGGATCTCCTAATGTAGTTGTTATGCACGAATACTTCTGGCGTGAGGAAGAGAACGCTGTGCTTGTGCTTGAGTTTCTTAGGTCGGATCTCGCTGCGGTGATCCGAGATGGTAAGAGGAAGAAGAAGGTAGAAGGAGGGGATGGATTCTCGGTTGGGGAGATTAAGAGATGGATGATTCAGATTTTAACCGGTGTTGATGCTTGTCATCGGAATTTGATTGTACATAGAGATTTGAAGCCTGGGAATATGTTGATTTCTGATGATGGAGTTCTTAAGCTTGCTGATTTTGGTCAGGCTAGGATACTCATGGAGCATGATATTGTAGCTTCAGATGAAAACCAACAAGCTTACAAACTGGAAGACAAAGATGGAGAAACCAGCGAACCACCAGAAGTTATTCCTGATTATGAGAACTCACCTAGGCAAGGGTCTGATGGTCAGGAACGGGAAGCGATGAGTAAAGACGAGTACTTCCGACAGGTGGAAGAGCTCAAGGCTAAACAGGTTGTTAGAGATGATACTGATAAGGACTCGAATGTGCATGATGGAGACATATCTTGCCTTGCAACGTGCACTGTTAGTGAAATGGATGATGATCTCGGTAGGAACTCGTTTTCTTACGATGCTGACGAAGCAGTGGATGATACACAGGGTTTGATGACATCTTGTGTGGGAACCCGATGGTTTAGGCCACCAGAACTGCTCTATGGATCTACGATGTATGGGTTAGAGGTCGATCTATGGTCGCTTGGTTGTGTGTTTGCAGAACTCTTGTCTCTTGAGCCTTTGTTCCCAGGAATTTCAGATATTGATCAGATCAGCAGAGTGACCAATGTGCTGGGAAATTTAAATGAAGAGGTCTGGCCTGGTTGTGTTGATCTTCCAGACTACAAGTCAATCTCATTTGCTAAAGTAGAATCTCCTCTTGGTATTGAAGGATGCCTTCCCAACCATTCAGGGGATGTGATATCGCTGCTCAAGAAGCTTATCTGTTATGATCCAGCTAGTAGAGCTACTACTATGGAGATGCTGAATGACAAATATTTAAGTGAAGAGCCTCTTCCAGTTCCAGTTTCAGAGCTCTATGTGCCTCCGACAATGAGTGGACCAGATGAGGATTCTCCGAGAAAGTGGAATGATTACAGAGAAATGGATTCAGATTCAGATTTTGATGGCTTTGGACCCATGAATGTAAAGCCTACCAGTAGTGGATTTACAATAGAATTCCCCTGACCTTGGCATTTAAGGTACGCAGTCAAAAGCTCTGGCTCGCTTAAACACATAAATCAGTCTCTTCTCTCTCTCTCTTTCTTCTTCAAAGAGAATGGGTATATACCAAAACCTGACATGTGTTTCTTTAGGTCTTGATTGATGCAACACTCTTTGTTGTTTGAAGATCTTGTTACAGAATACCGCTTAGAAAATTGTTAACTTTTCGTTAGGACATTGTTTAGGTATCAATGGCGGCAAAAACTTTTGAAATTCGTTTGCTCATTGATCTCACAACTTTTTTTTGCGCTTTGTTTCTCTCATCGATCTCAGTTTTATGTGTTTATCTCTCCTTGGCAGAGTCCATGGTTGAGCATCTTGATCATCCCGACTTCCCCTGAATTCGCCTACTTTGTCAAAAATGTGTTGTGTGTGTGTGTGTGTTGTTCCTCTCTCTCTGCCTCCCTCGTATGAAAATGGTAACATTTACAATTGGAAAGTCGGTGTTAGCCTTTAGCTATTAGCTGAAGAGCTAGTTTTCTTGTTGCCCAGGCCATTCTTTACCCTATTTTTCATCTGAAGTAACAATGAAACAAAATCTATATATACTCGAGTTTTGCTTTCTAGGATCTGTATTTCTTAATTGTTTCTATATTTTGATCAATTTTGAACTTTTCATATCAAGTTATCAACATGTGTAGTAGCAACCCTTCAATAATGAGACCATGGAATAAAAGCCTA
CDS Sequence
Protein Sequence