Information report for AT4G28910
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
Literature and News
- A small plant-specific protein family of ABI five binding proteins (AFPs) regulates stress response in germinating Arabidopsis seeds and seedlings. DOI: 10.1007/s11103-008-9344-2 ; PMID: 18484180
- NINJA connects the co-repressor TOPLESS to jasmonate signalling. DOI: 10.1038/nature08854 ; PMID: 20360743
- Dissection of the one-MegaDalton JAZ1 protein complex. DOI: 10.4161/psb.5.8.12338 ; PMID: 20671423
- JAZ8 lacks a canonical degron and has an EAR motif that mediates transcriptional repression of jasmonate responses in Arabidopsis. DOI: 10.1105/tpc.111.093005 ; PMID: 22327740
- Negative feedback control of jasmonate signaling by an alternative splice variant of JAZ10. DOI: 10.1104/pp.113.218164 ; PMID: 23632853
- The non-JAZ TIFY protein TIFY8 from Arabidopsis thaliana is a transcriptional repressor. DOI: 10.1371/journal.pone.0084891 ; PMID: 24416306
- Repression of jasmonate signaling by a non-TIFY JAZ protein in Arabidopsis. DOI: 10.1111/tpj.12841 ; PMID: 25846245
- Multilayered Organization of Jasmonate Signalling in the Regulation of Root Growth. DOI: 10.1371/journal.pgen.1005300 ; PMID: 26070206
- Structural basis for recognition of diverse transcriptional repressors by the TOPLESS family of corepressors. DOI: 10.1126/sciadv.1500107 ; PMID: 26601214
- ABI5-binding proteins (AFPs) alter transcription of ABA-induced genes via a variety of interactions with chromatin modifiers. DOI: 10.1007/s11103-016-0569-1 ; PMID: 27942958
- NINJA-associated ERF19 negatively regulates Arabidopsis pattern-triggered immunity. DOI: 10.1093/jxb/ery414 ; PMID: 30462256
- JAZ4 is involved in plant defense, growth, and development in Arabidopsis. DOI: 10.1111/tpj.14548 ; PMID: 31557372
- Arabidopsis ECAP Is a New Adaptor Protein that Connects JAZ Repressors with the TPR2 Co-repressor to Suppress Jasmonate-Responsive Anthocyanin Accumulation. DOI: 10.1016/j.molp.2019.10.014 ; PMID: 31706031
- Reconstitution of the Jasmonate Signaling Pathway in Plant Protoplasts. DOI: 10.3390/cells8121532 ; PMID: 31795159
- Regulation of jasmonate signaling by reversible acetylation of TOPLESS in Arabidopsis. DOI: 10.1016/j.molp.2022.06.014 ; PMID: 35780296
- A genome-wide association study identifies novel players in Na and Fe homeostasis in Arabidopsis thaliana under alkaline-salinity stress. DOI: 10.1111/tpj.16042 ; PMID: 36433704
Gene Resources
- UniProt: A0A178UVV4
- EMBL: CACRSJ010000109, LUHQ01000004
- AlphaFoldDB: A0A178UVV4
- EnsemblPlants: AT4G28910.1, AT4G28910.2, AT4G28910.3
- Gramene: AT4G28910.1, AT4G28910.2, AT4G28910.3
- KEGG: ath:AT4G28910
- Orthologous matrix: PVMFGYP
- ExpressionAtlas: AT4G28910
- InterPro: IPR031307, IPR032308
- PANTHER: PTHR31413, PTHR31413:SF12
- SWISS-MODEL: A0A178UVV4
Sequences
cDNA Sequence
- >AT4G28910.2
GTAGTATATATGCTGACTATACGATTGTTATTTATTCAAAAGTTAAGAAAATGCACAAGATACACATGGACGAAATCGAAACTAATTGTACAATAAAATAATAATTATTAGTATTACGAAGGGAAAAGGGAAATGGTCCGTACTAGTTGTCCGAACCCGAAGAAGCCCCAATCGCTGATGCAACTGTCTAGGAGCCGCCACGCTGCGAAGAAGCTCTAGGGTTTGTTCGTCTTCTTCCTCGGTTTCATCAGAACTCAAAAGGTACTTGGTAGGAGCGAGAAGAAAGTTTCTGGAGAATTGCTGAATTGTTTCTTTCAATGGTTTTGTTTCTAAGATGGTAATCAAGATTGTTGACGGTGCTCTGAAGATCTGTTGACCTGCTCAGAGTTTGCTTAAAAAGTTTGAGAAAAAATGGACGATGATAATGGGCTCGAGCTCAGCTTGGGTCTTTCTTGTGGAGGATCAACAGGAAAAGCTAAGGGTAACAATAATAATAATGCTGGAAGCTCCTCAGAGAACTACAGGGCAGAAGGAGGCGATAGAAGTGCTAAAGTGATTGATGACTTTAAGAACTTCCTGCATCCAACTTCTCAAAGACCTGCAGAGCCGAGTTCTGGTTCTCAGAGAAGTGATTCGGGTCAACAGCCTCCACAAAATTTCTTCAATGACCTCTCAAAAGCTCCTACAACTGAGGCTGAAGCTTCTACGAAACCTTTGTGGGTGGAGGATGAGTCACGGAAAGAAGCAGGGAACAAAAGAAAGTTCGGGTTCCCGGGGATGAATGATGATAAGAAAAAAGAGAAGGACTCGTCTCATGTTGATATGCATGAGAAGAAGACAAAAGCATCCCATGTTTCAACTGCGACAGATGAAGGATCAACAGCTGAAAACGAAGATGTAGCAGAGTCTGAAGTAGGTGGTGGTTCTTCTTCCAACCACGCAAAGGAGGTGGTTCGTCCTCCTACTGATACAAACATTGTGGACAACTTAACTGGTCAAAGGAGGAGCAACCATGGTGGATCTGGCACTGAAGAGTTTACAATGCGCAACATGAGTTACACCGTACCTTTCACAGTTCATCCGCAAAATGTCGTCACTAGTATGCCTTACTCTTTACCGACAAAAGAGTCTGGACAACACGCAGCAGCTACAAGTCTATTGCAGCCTAATGCTAATGCTGGAAATCTCCCGATTATGTTCGGATACTCACCAGTCCAGCTCCCTATGCTAGATAAGGACGGTTCAGGAGGGATTGTCGCACTTTCTCAATCTCCATTTGCTGGAAGAGTTCCATCAAACTCAGCTACTGCAAAAGGCGAAGGCAAACAACCTGTTGCAGAAGAAGGTTCATCCGAGGATGCATCAGAACGACCAACGGGAGACAACAGCAACCTCAATACCGCTTTCTCTTTCGACTTTTCTGCCATAAAACCTGGAATGGCAGCAGATGTGAAGTTTGGAGGATCCGGGGCACGTCCCAACTTACCGTGGGTCTCAACCACTGGTTCAGGCCCACACGGACGGACAATCTCAGGTGTCACATACCGGTACAACGCAAACCAGATCAAAATCGTATGCGCTTGCCACGGCTCGCACATGTCACCGGAGGAGTTTGTACGGCACGCAAGCGAGGAGTACGTTAGCCCAGAATCATCCATGGGAATGACTGCAGCGTCAGCTCACACCTGAAAAGTCACCACCGGAAAAAAAGATGTCTGAAATCTTGTAAACAAATGGAAGGGTTTGTAATGAGTTTCTTTTTGGAACATACATTTTATTATGTTTAGTCGGATCAAACTCTCAAGCCAAAGTTTTTTAACTGAGCTTTCTGTTATGTTGTTGTAATCTCTCTACTTCATCACAATTCCTTATGTAATCCTCTTCTTTCCTTTTTGTTTTTTGGTTGAAAGGAAATTATATATAACCATAACATTATCGGTGTCCTTTGTTCCTTTGGTTAAAATCTAAACAACTATTTTGGTAAA - >AT4G28910.1
GTAGTATATATGCTGACTATACGATTGTTATTTATTCAAAAGTTAAGAAAATGCACAAGATACACATGGACGAAATCGAAACTAATTGTACAATAAAATAATAATTATTAGTATTACGAAGGGAAAAGGGAAATGGTCCGTACTAGTTGTCCGAACCCGAAGAAGCCCCAATCGCTGATGCAACTGTCTAGGAGCCGCCACGCTGCGAAGAAGCTCTAGGGTTTGTTCGTCTTCTTCCTCGGTTTCATCAGAACTCAAAAGGTACTTGGTAGGAGCGAGAAGAAAGTTTCTGGAGAATTGCTGAATTGTTTCTTTCAATGGTTTTGTTTCTAAGATGGTAATCAAGATTGTTGACGGTGCTCTGAAGATCTGTTGACCTGCTCAGAGTTTGCTTAAAAAGTTTGAGAAAAAATGGACGATGATAATGGGCTCGAGCTCAGCTTGGGTCTTTCTTGTGGAGGATCAACAGGAAAAGCTAAGGGTAACAATAATAATAATGCTGGAAGCTCCTCAGAGAACTACAGGGCAGAAGGAGGCGATAGAAGTGCTAAAGTGATTGATGACTTTAAGAACTTCCTGCATCCAACTTCTCAAAGACCTGCAGAGCCGAGTTCTGGTTCTCAGAGAAGTGATTCGGGTCAACAGCCTCCACAAAATTTCTTCAATGACCTCTCAAAAGCTCCTACAACTGAGGCTGAAGCTTCTACGAAACCTTTGTGGGTGGAGGATGAGTCACGGAAAGAAGCAGGGAACAAAAGAAAGTTCGGGTTCCCGGGGATGAATGATGATAAGAAAAAAGAGAAGGACTCGTCTCATGTTGATATGCATGAGAAGAAGACAAAAGCATCCCATGTTTCAACTGCGACAGATGAAGGATCAACAGCTGAAAACGAAGATGTAGCAGAGTCTGAAGTAGGTGGTGGTTCTTCTTCCAACCACGCAAAGGAGGTGGTTCGTCCTCCTACTGATACAAACATTGTGGACAACTTAACTGGTCAAAGGAGGAGCAACCATGGTGGATCTGGCACTGAAGAGTTTACAATGCGCAACATGAGTTACACCGTACCTTTCACAGTTCATCCGCAAAATGTCGTCACTAGTATGCCTTACTCTTTACCGACAAAAGAGTCTGGACAACACGCAGCAGCTACAAGTCTATTGCAGCCTAATGCTAATGCTGGAAATCTCCCGATTATGTTCGGATACTCACCAGTCCAGCTCCCTATGCTAGATAAGGACGGTTCAGGAGGGATTGTCGCACTTTCTCAATCTCCATTTGCTGGAAGAGTTCCATCAAACTCAGCTACTGCAAAAGGCGAAGGCAAACAACCTGTTGCAGAAGAAGGTTCATCCGAGGATGCATCAGAACGACCAACGGGAGACAACAGCAACCTCAATACCGCTTTCTCTTTCGACTTTTCTGCCATAAAACCTGGAATGGCAGCAGATGTGAAGTTTGGAGGATCCGGGGCACGTCCCAACTTACCGTGGGTCTCAACCACTGGTTCAGGCCCACACGGACGGACAATCTCAGGTGTCACATACCGGTACAACGCAAACCAGATCAAAATCGTATGCGCTTGCCACGGCTCGCACATGTCACCGGAGGAGTTTGTACGGCACGCAAGCGAGGAGTACGTTAGCCCAGAATCATCCATGGGAATGACTGCAGCGTCAGCTCACACCTGAAAAGTCACCACCGGAAAAAAAGATGTCTGAAATCTTGTAAACAAATGGAAGGGTTTGTAATGAGTTTCTTTTTGGAACATACATTTTATTATGTTTAGTCGGATCAAACTCTCAAGCCAAAGTTTTTTAACTGAGCTTTCTGTTATGTTGTTGTAATCTCTCTACTTCATCACAATTCCTTATGTAATCCTCTTCTTTCCTTTTTGTTTTTTGGTTGAAAGGAAATTATATATAACCATAACATTATCGGTGTCCTTTGTTCCTTTGGTTAAAATCTAAACAACTATTTTGGTAAA - >AT4G28910.3
GTAGTATATATGCTGACTATACGATTGTTATTTATTCAAAAGTTAAGAAAATGCACAAGATACACATGGACGAAATCGAAACTAATTGTACAATAAAATAATAATTATTAGTATTACGAAGGGAAAAGGGAAATGGTCCGTACTAGTTGTCCGAACCCGAAGAAGCCCCAATCGCTGATGCAACTGTCTAGGAGCCGCCACGCTGCGAAGAAGCTCTAGGGTTTGTTCGTCTTCTTCCTCGGTTTCATCAGAACTCAAAAGGTACTTGGTAGGAGCGAGAAGAAAGTTTCTGGAGAATTGCTGAATTGTTTCTTTCAATGGTTTTGTTTCTAAGATGGTAATCAAGATTGTTGACGGTGCTCTGAAGATCTGTTGACCTGCTCAGAGTTTGCTTAAAAAGTTTGAGAAAAAATGGACGATGATAATGGGCTCGAGCTCAGCTTGGGTCTTTCTTGTGGAGGATCAACAGGAAAAGCTAAGGGTAACAATAATAATAATGCTGGAAGCTCCTCAGAGAACTACAGGGCAGAAGGAGGCGATAGAAGTGCTAAAGTGATTGATGACTTTAAGAACTTCCTGCATCCAACTTCTCAAAGACCTGCAGAGCCGAGTTCTGGTTCTCAGAGAAGTGATTCGGGTCAACAGCCTCCACAAAATTTCTTCAATGACCTCTCAAAAGCTCCTACAACTGAGGCTGAAGCTTCTACGAAACCTTTGTGGGTGGAGGATGAGTCACGGAAAGAAGCAGGGAACAAAAGAAAGTTCGGGTTCCCGGGGATGAATGATGATAAGAAAAAAGAGAAGGACTCGTCTCATGTTGATATGCATGAGAAGAAGACAAAAGCATCCCATGTTTCAACTGCGACAGATGAAGGATCAACAGCTGAAAACGAAGATGTAGCAGAGTCTGAAGTAGGTGGTGGTTCTTCTTCCAACCACGCAAAGGAGGTGGTTCGTCCTCCTACTGATACAAACATTGTGGACAACTTAACTGGTCAAAGGAGGAGCAACCATGGTGGATCTGGCACTGAAGAGTTTACAATGCGCAACATGAGTTACACCGTACCTTTCACAGTTCATCCGCAAAATGTCGTCACTAGTATGCCTTACTCTTTACCGACAAAAGAGTCTGGACAACACGCAGCAGCTACAAGTCTATTGCAGCCTAATGCTAATGCTGGAAATCTCCCGATTATGTTCGGATACTCACCAGTCCAGCTCCCTATGCTAGATAAGGACGGTTCAGGAGGGATTGTCGCACTTTCTCAATCTCCATTTGCTGGAAGAGTTCCATCAAACTCAGCTACTGCAAAAGGCGAAGGCAAACAACCTGTTGCAGAAGAAGGTTCATCCGAGGATGCATCAGAACGACCAACGGGAGACAACAGCAACCTCAATACCGCTTTCTCTTTCGACTTTTCTGCCATAAAACCTGGAATGGCAGCAGATGTGAAGTTTGGAGGATCCGGGGCACGTCCCAACTTACCGTGGGTCTCAACCACTGGTTCAGGCCCACACGGACGGACAATCTCAGGTGTCACATACCGGTACAACGCAAACCAGATCAAAATCGTATGCGCTTGCCACGGCTCGCACATGTCACCGGAGGAGTTTGTACGGCACGCAAGCGAGGAGTACGTTAGCCCAGAATCATCCATGGGAATGACTGCAGCGTCAGCTCACACCTGAAAAGTCACCACCGGAAAAAAAGATGTCTGAAATCTTGTAAACAAATGGAAGGGTTTGTAATGAGTTTCTTTTTGGAACATACATTTTATTATGTTTAGTCGGATCAAACTCTCAAGCCAAAGTTTTTTAACTGAGCTTTCTGTTATGTTGTTGTAATCTCTCTACTTCATCACAATTCCTTATGTAATCCTCTTCTTTCCTTTTTGTTTTTTGGTTGAAAGGAAATTATATATAACCATAACATTATCGGTGTCCTTTGTTCCTTTGGTTAAAATCTAAACAACTATTTTGGTAAA
CDS Sequence
Protein Sequence