Gene Details:
- Gene ID: AT4G28890
- Gene Symbol: ATL42
- Gene Name: Arabidopsis Tóxicos en Levadura 42
- Description: RING/U-box superfamily protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0003015 — primary root differentiation zone — zona de diferenciación de la raíz primary (Spanish, exact), 一次根分化帯(層) (Japanese, exact)
- PO:0005059 — root endodermis — endodermis de la raíz (Spanish, exact), 根内皮 (Japanese, exact)
- PO:0020124 — root stele — estela de la raíz (Spanish, exact), 根中心柱 (Japanese, exact), root vascular cylinder (related)
Function-related keywords:
Literature:
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Functional analysis of the RING-type ubiquitin ligase family of Arabidopsis. DOI: 10.1104/pp.104.052423 ; PMID: 15644464
- Quantification of transcription factor expression from Arabidopsis images. DOI: 10.1093/bioinformatics/btl228 ; PMID: 16873489
- Transcriptional dynamics of two seed compartments with opposing roles in Arabidopsis seed germination. DOI: 10.1104/pp.113.223511 ; PMID: 23858430
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
- Functional analysis of the RING-type ubiquitin ligase family of Arabidopsis. DOI: 10.1104/pp.104.052423 ; PMID: 15644464
- Transcriptional and posttranscriptional regulation of transcription factor expression in Arabidopsis roots. DOI: 10.1073/pnas.0510607103 ; PMID: 16581911
Sequences:
cDNA Sequence
- >AT4G28890.1
CCGAAAGATAAAATTGTATTTAATTAAATGGAGAGAATAGTAGAAGACAAATAGAGCATAGATAAAAAGCAATAGCATACAAATTGTTGTCACGTATATGACGTAATTGTATTAGTTTATAGCATACACCGAAAAATATCACTTTCTCTAACATAATCTCATTTTCATCTCCAATAAAACTATTTCAAACCCAAGAATATCAAGAAACAAAGTTTCTCTCGAACGCTCCGATGTATCAAATCTTCTTTTTCTTTCTTCCTCTCCTCCACAGTTATGCCTCTGCCCAGACTCCTCCTCCGTTCAGAAACGGTGACCTCGTCGCAAATTTTGAGCCGAGTTTAGCCGTCGTCACCGGAGTTCTCGCCATCATGTTCGCACTCACTTTCGTCCTCCTCGTCTACGCTAAGTGCTGCCACATCGATCTCCGATCAGGTTCCGGCGACAGAAGAAGGCACGATCGCCGGCTCAGACAAGGAATATTCTTTAACCGGTCAACGGCATCATCGGATCGATTCTCTGGTTTAGACAAAACAGCAATCGAGTCTCTTCCTCTGTTTAGATTCTCTGCTTTGAAAGGATCAAAACAAGGTCTTGATTGTTCTGTCTGTTTGTCTAAATTCGAAAGTGTTGAGATTCTTAGATTGTTGCCTAAGTGTAGACACGCTTTCCACATCGGATGTATCGATCAGTGGCTTGAGCAACACGCAACTTGTCCTCTTTGCAGAGATAGAGTCTCAATGGAAGAAGATTCCTCTGTTCTCACTAACGGAAACAGTTTCAGGTTCTTGAATCAGTCTGAGATTAGAGAAGATTCGAGCTTGGAGCTTTACATCGAGAGAGAAGAAGAAGAAGAAAGAATACACAGAGAAGAACTTAGTGGGTCGTCGAGATTCAGCATCGGAGAGAGTTTCCGGAAGATTCTGAAATTAGGTAATAAAGAAAAAACGTTACTTGATGAACACGTGAACGATAAAGATGAGAAGAAGCTTATGCACAAGTTCAATCATAGGATCGTTGTGTCGGATGTTGTTTTCAAGAATCGTTGGAGCAACGTGAGTTCATCAGATTTGATGTTTTTGAATTCCGAGATGGTTAATTCGATTTCTAGCGAGAGATTTTCTTCATTGGATCATGTGAAGAGAGGAGATGAAGAGGATCAGATAGGTATCTTGCGAATCAAGGAAGAGATGGAAGCGAAGAGAATGTTGGAGAACAAGTTAACTTCGATGACAACTATGTTTTCCTCGGAAAACGGAGACTCTGGTTCGAAATCAAGAAGCGTTATGATCGAACCAGGACGAAGATCGGTGTCTGACATCACTGCGGTTCCTAGACTCAGTATATCGATTCATGGAGATTGCAGCGGTTCAGCCGCAGAGACTGCGTCTGCGTTACAAAACGGTGGGAATGAGACGGAGGAGAGAAGACGGCGTTTGTGGCTGCCGATCGCTAGAAAAACTGCTCAATGGTTTGCTAACAGAGAAAAAAGAAGTCAAATTAACACAACACACCAACACTTTGATGTTTAGTTTCTTTATTTTTCTTAAAAATTTGCAATTCTTTTTCAGATTCAATTTGAGACTATTTTCCCATAATTAGTAGATACAAGTTTTGATTTTAAGTTATGTTCAGAGAATTCTACTAATGTTAATACTTAATACATGTTAGTTGGATCAAACGAAGCTGATTTGTGTAAATAAGATAGATTTATGTATAAACAAAG
CDS Sequence
Protein Sequence