Information report for AT4G28660
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- The AtRbx1 protein is part of plant SCF complexes, and its down-regulation causes severe growth and developmental defects. DOI: 10.1074/jbc.M204254200 ; PMID: 12381738
- In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. DOI: 10.1105/tpc.017814 ; PMID: 14729914
- New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. DOI: 10.1074/jbc.M406763200 ; PMID: 15322131
- A homeodomain leucine zipper gene from Craterostigma plantagineum regulates abscisic acid responsive gene expression and physiological responses. DOI: 10.1007/s11103-006-0023-x ; PMID: 16830180
- Oviposition by pierid butterflies triggers defense responses in Arabidopsis. DOI: 10.1104/pp.106.090837 ; PMID: 17142483
- Global transcription profiling reveals differential responses to chronic nitrogen stress and putative nitrogen regulatory components in Arabidopsis. DOI: 10.1186/1471-2164-8-281 ; PMID: 17705847
- Water deficits and heat shock effects on photosynthesis of a transgenic Arabidopsis thaliana constitutively expressing ABP9, a bZIP transcription factor. DOI: 10.1093/jxb/erm364 ; PMID: 18272919
- Mechanistic duality of transcription factor function in phytochrome signaling. DOI: 10.1073/pnas.0711675105 ; PMID: 18245378
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Identification and Roles of Photosystem II Assembly, Stability, and Repair Factors in Arabidopsis. DOI: 10.3389/fpls.2016.00168 ; PMID: 26909098
- Structure and function of the hydrophilic Photosystem II assembly proteins: Psb27, Psb28 and Ycf48. DOI: 10.1016/j.plaphy.2014.02.013 ; PMID: 24656878
- In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. DOI: 10.1105/tpc.017814 ; PMID: 14729914
- New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. DOI: 10.1074/jbc.M406763200 ; PMID: 15322131
- High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study. DOI: 10.1104/pp.106.080150 ; PMID: 16648217
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. DOI: 10.1074/mcp.M500180-MCP200 ; PMID: 16207701
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A5S9XXM7
- EMBL: CACRSJ010000109, CACSHJ010000095
- AlphaFoldDB: A0A5S9XXM7
- EnsemblPlants: AT4G28660.1
- Gramene: AT4G28660.1
- KEGG: ath:AT4G28660
- Orthologous matrix: VIMMVKP
- ExpressionAtlas: AT4G28660
- InterPro: IPR005610, IPR038676
- PANTHER: PTHR34963, PTHR34963:SF2
- Gene3D: 2.40.30.220
- OrthoDB: A0A5S9XXM7
- SWISS-MODEL: A0A5S9XXM7
Sequences
cDNA Sequence
- >AT4G28660.1
GTAAAAGCCCATAAGTTGAGACGATGACGGTATCCAAATGAAGGAACGGCTTTGGTAGTGACACGTCACGATTCTCCCGCCACCACACCACAGCTTTTTGCTTCATCTCCTTCTTACTCTCTGTGTCTCTAACTCCTCGTGCACTCAGACATCACAGATATGGCTTGTGTTCGGTCGATTGGTTCTTTAACTTCTGTCAACCATTCTCAACGAAATGTTCCTCGCTCAGGCATTGTCTTATCTTCATGCTCTGTTCTTCCCATCAAAAGCTCATCTTTCACTGGATCCCCTGTTTCTCTCCCGCGGGCTCAACCATCATCCCGAACAGCTCTAAGACCGATGAAACCCGTCTCTATCACGATGATGGTAAAGCCGGCGCTCCAATTCATCCAAGGGACGGATGAGATGACAATCCCTGATGTTAAGCTGACTCGATCAAGAGACGGAAGCAACGGAATGGCACTGTTCTCTTTCGACCAACCATCCGTTTTCGACTCGAGCGGTGAAGTCGGAGAGATTACAGGATTGTACATGATTGATGAGGAAGGTGTGATTCAGTCGACGGATGTGAACGCGAGATTCGTGAATGGGAAACCGGAAGGGATTGTGGCGAAGCACATAATGCGATCGCCGAAAGAATGGGACAGGTTCATGAGGTTTATGGAGCGATACTCGGACCAGAATGGCTTGCAGTTTGTTAAGAAGCAATGAGGTTGGAGAGAATTTTCAATGAGCAAAACAAAATGTGTATGTTACATTAAATTTTTTCACTCTTTTGATTTATAATCTTGTACTCTCCTAGTTTTGATCTTTACTTGAGTTTCAACTTACAATGGTAATCTAGGCTTTTGTTCTGATTAAATTTGGTTTAATCTAAACAAATCCATGATTTTACTAAAGGTATGATCATAATTTCATTATGAATTGTGCTATTAGTCAAA - >AT4G28660.2
GTAAAAGCCCATAAGTTGAGACGATGACGGTATCCAAATGAAGGAACGGCTTTGGTAGTGACACGTCACGATTCTCCCGCCACCACACCACAGCTTTTTGCTTCATCTCCTTCTTACTCTCTGTGTCTCTAACTCCTCGTGCACTCAGACATCACAGATATGGCTTGTGTTCGGTCGATTGGTTCTTTAACTTCTGTCAACCATTCTCAACGAAATGTTCCTCGCTCAGGCATTGTCTTATCTTCATGCTCTGTTCTTCCCATCAAAAGCTCATCTTTCACTGGATCCCCTGTTTCTCTCCCGCGGGCTCAACCATCATCCCGAACAGCTCTAAGACCGATGAAACCCGTCTCTATCACGATGATGGTAAAGCCGGCGCTCCAATTCATCCAAGGGACGGATGAGATGACAATCCCTGATGTTAAGCTGACTCGATCAAGAGACGGAAGCAACGGAATGGCACTGTTCTCTTTCGACCAACCATCCGTTTTCGACTCGAGCGGTGAAGTCGGAGAGATTACAGGATTGTACATGATTGATGAGGAAGGTGTGATTCAGTCGACGGATGTGAACGCGAGATTCGTGAATGGGAAACCGGAAGGGATTGTGGCGAAGCACATAATGCGATCGCCGAAAGAATGGGACAGGTTCATGAGGTTTATGGAGCGATACTCGGACCAGAATGGCTTGCAGTTTGTTAAGAAGCAATGAGGTTGGAGAGAATTTTCAATGAGCAAAACAAAATGTGTATGTTACATTAAATTTTTTCACTCTTTTGATTTATAATCTTGTACTCTCCTAGTTTTGATCTTTACTTGAGTTTCAACTTACAATGGTAATCTAGGCTTTTGTTCTGATTAAATTTGGTTTAATCTAAACAAATCCATGATTTTACTAAAGGTATGATCATAATTTCATTATGAATTGTGCTATTAGTCAAA
CDS Sequence
Protein Sequence