Information report for AT4G28640
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- CS25212 — No visible phenotype.
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Genetics of Aux/IAA and ARF action in plant growth and development. DOI: NA ; PMID: 12036262
- Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. DOI: 10.1104/pp.103.034736 ; PMID: 15047898
- Contrasting modes of diversification in the Aux/IAA and ARF gene families. DOI: 10.1104/pp.104.039669 ; PMID: 15247399
- Cell cycle progression in the pericycle is not sufficient for SOLITARY ROOT/IAA14-mediated lateral root initiation in Arabidopsis thaliana. DOI: 10.1105/tpc.105.035493 ; PMID: 16243906
- At5PTase13 modulates cotyledon vein development through regulating auxin homeostasis. DOI: 10.1104/pp.105.067140 ; PMID: 16299182
- The Arabidopsis Aux/IAA protein family has diversified in degradation and auxin responsiveness. DOI: 10.1105/tpc.105.039172 ; PMID: 16489122
- Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling. DOI: 10.1111/j.1365-313X.2006.02756.x ; PMID: 16805732
- Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses. DOI: 10.1016/j.cell.2006.05.050 ; PMID: 16901781
- General detoxification and stress responses are mediated by oxidized lipids through TGA transcription factors in Arabidopsis. DOI: 10.1105/tpc.107.054809 ; PMID: 18334669
- The heterozygous abp1/ABP1 insertional mutant has defects in functions requiring polar auxin transport and in regulation of early auxin-regulated genes. DOI: 10.1111/j.1365-313X.2010.04420.x ; PMID: 21223392
- Architecture of DNA elements mediating ARF transcription factor binding and auxin-responsive gene expression in Arabidopsis. DOI: 10.1073/pnas.2009554117 ; PMID: 32929017
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- General detoxification and stress responses are mediated by oxidized lipids through TGA transcription factors in Arabidopsis. DOI: 10.1105/tpc.107.054809 ; PMID: 18334669
Gene Resources
- UniProt: F4JLC8
- EMBL: CP002687
- AlphaFoldDB: F4JLC8
- EnsemblPlants: AT4G28640.3
- Gramene: AT4G28640.3
- ExpressionAtlas: AT4G28640
- InterPro: IPR003311, IPR033389, IPR053793
- PANTHER: PTHR31734, PTHR31734:SF6
- SUPFAM: SSF54277
- PROSITE: PS51745
- Gene3D: 3.10.20.90
- OrthoDB: F4JLC8
- SWISS-MODEL: F4JLC8
Sequences
cDNA Sequence
- >AT4G28640.3
AAAAATGATAAAATTGGGCGAGAAATAAGACTAAAAGTTAGGGAAGTGAAAAAGAGACAAATCCCACCCGTCGTGTCTTCTTGTTCATCCTTTGTTTCCCTTTTTCTTTCTCACTGTTTCTGCCTTACTTAAAGTCTCAATCTTTGCTTCAAATTCAACCCATCTCTTTTTCCTCCCTTCCCTCACAATCAAAATCTTAATTCTCAGCTTCTGGTTTTGTCGAAAATGGAAGGCGGTTCCGCTAGTGGATCGGCTTCGGCTTTGTCAAACGATGAAAATCTCGTCGTTTCTTGTGAGGATTCTTCTTCTCCTATAGGGAATGAGCTTGAGCTTGGTCTTACGTTGAGCCTTGGTCGCAAAGGGTATCGAGATTGTAGGGTTTACGCTGATGATTCTTCTTCTTCTTCATCATCTTCTTCTCTGAGCAGAGCTAGCGTAATTGCTGGGATCAAGAGGACAGCTGATTCCATGGCTGCAACTAGTGGGCAAGTTGTGGGATGGCCACCAATAAGGACTTACAGAATGAACAGTATGGTTAACCAAGCTAAGGCTTCAGCCACTGAAGATCCGAACTTGGAGATAAGTCAAGCCGTAAACAAGAATAGAAGTGATTCAACAAAGATGAGAAATTCCATGTTTGTTAAGGTGACTATGGATGGCATTCCTATTGGAAGGAAAATCGATCTGAATGCTCATAAATGCTATGAATCATTGTCAAACACTCTAGAGGAAATGTTTCTGAAACCTAAATTAGGTTCACGCACACTAGAAACCGATGGTCACATGGAAACACCGGTCAAGATACTACCAGATGGGTCTTCCGGATTAGTACTAACGTATGAAGACAAGGAAGGAGATTGGATGCTTGTTGGCGATGTTCCGTGGGGGATGTTTATTGGTTCAGTGAGAAGGCTCCGGATAATGAAAACATCGGAGGCTACTGGTAAAGGTACATTTACTGATTCGATCAAATCCTGATATCTGTATTAAAATCATTGTTTTGTCGTTGTGACCGTGTTTGTGTGATCCTTGTTTACAGCTCAGATGATATTATGAAGCAAATAATAATCTACGAAGAACCCTTTATGTTTGAAGCAGTAATAAGACAGATCACAGATCAAAGAGAAGACAAAAACATTGTAAGAAGCTTCTTCTTCTTCTCTCCCCTTTACAGTTTCTTTTTTGGCTCTGCCATTTTTCTTTTAGTTAGTTATATGTTCTCTTTGTAAATCACACTTTAAAAATCTATAAGAAAACCCTTTCTTGCAC - >AT4G28640.1
AAAAATGATAAAATTGGGCGAGAAATAAGACTAAAAGTTAGGGAAGTGAAAAAGAGACAAATCCCACCCGTCGTGTCTTCTTGTTCATCCTTTGTTTCCCTTTTTCTTTCTCACTGTTTCTGCCTTACTTAAAGTCTCAATCTTTGCTTCAAATTCAACCCATCTCTTTTTCCTCCCTTCCCTCACAATCAAAATCTTAATTCTCAGCTTCTGGTTTTGTCGAAAATGGAAGGCGGTTCCGCTAGTGGATCGGCTTCGGCTTTGTCAAACGATGAAAATCTCGTCGTTTCTTGTGAGGATTCTTCTTCTCCTATAGGGAATGAGCTTGAGCTTGGTCTTACGTTGAGCCTTGGTCGCAAAGGGTATCGAGATTGTAGGGTTTACGCTGATGATTCTTCTTCTTCTTCATCATCTTCTTCTCTGAGCAGAGCTAGCGTAATTGCTGGGATCAAGAGGACAGCTGATTCCATGGCTGCAACTAGTGGGCAAGTTGTGGGATGGCCACCAATAAGGACTTACAGAATGAACAGTATGGTTAACCAAGCTAAGGCTTCAGCCACTGAAGATCCGAACTTGGAGATAAGTCAAGCCGTAAACAAGAATAGAAGTGATTCAACAAAGATGAGAAATTCCATGTTTGTTAAGGTGACTATGGATGGCATTCCTATTGGAAGGAAAATCGATCTGAATGCTCATAAATGCTATGAATCATTGTCAAACACTCTAGAGGAAATGTTTCTGAAACCTAAATTAGGTTCACGCACACTAGAAACCGATGGTCACATGGAAACACCGGTCAAGATACTACCAGATGGGTCTTCCGGATTAGTACTAACGTATGAAGACAAGGAAGGAGATTGGATGCTTGTTGGCGATGTTCCGTGGGGGATGTTTATTGGTTCAGTGAGAAGGCTCCGGATAATGAAAACATCGGAGGCTACTGGTAAAGGTACATTTACTGATTCGATCAAATCCTGATATCTGTATTAAAATCATTGTTTTGTCGTTGTGACCGTGTTTGTGTGATCCTTGTTTACAGCTCAGATGATATTATGAAGCAAATAATAATCTACGAAGAACCCTTTATGTTTGAAGCAGTAATAAGACAGATCACAGATCAAAGAGAAGACAAAAACATTGTAAGAAGCTTCTTCTTCTTCTCTCCCCTTTACAGTTTCTTTTTTGGCTCTGCCATTTTTCTTTTAGTTAGTTATATGTTCTCTTTGTAAATCACACTTTAAAAATCTATAAGAAAACCCTTTCTTGCAC - >AT4G28640.2
AAAAATGATAAAATTGGGCGAGAAATAAGACTAAAAGTTAGGGAAGTGAAAAAGAGACAAATCCCACCCGTCGTGTCTTCTTGTTCATCCTTTGTTTCCCTTTTTCTTTCTCACTGTTTCTGCCTTACTTAAAGTCTCAATCTTTGCTTCAAATTCAACCCATCTCTTTTTCCTCCCTTCCCTCACAATCAAAATCTTAATTCTCAGCTTCTGGTTTTGTCGAAAATGGAAGGCGGTTCCGCTAGTGGATCGGCTTCGGCTTTGTCAAACGATGAAAATCTCGTCGTTTCTTGTGAGGATTCTTCTTCTCCTATAGGGAATGAGCTTGAGCTTGGTCTTACGTTGAGCCTTGGTCGCAAAGGGTATCGAGATTGTAGGGTTTACGCTGATGATTCTTCTTCTTCTTCATCATCTTCTTCTCTGAGCAGAGCTAGCGTAATTGCTGGGATCAAGAGGACAGCTGATTCCATGGCTGCAACTAGTGGGCAAGTTGTGGGATGGCCACCAATAAGGACTTACAGAATGAACAGTATGGTTAACCAAGCTAAGGCTTCAGCCACTGAAGATCCGAACTTGGAGATAAGTCAAGCCGTAAACAAGAATAGAAGTGATTCAACAAAGATGAGAAATTCCATGTTTGTTAAGGTGACTATGGATGGCATTCCTATTGGAAGGAAAATCGATCTGAATGCTCATAAATGCTATGAATCATTGTCAAACACTCTAGAGGAAATGTTTCTGAAACCTAAATTAGGTTCACGCACACTAGAAACCGATGGTCACATGGAAACACCGGTCAAGATACTACCAGATGGGTCTTCCGGATTAGTACTAACGTATGAAGACAAGGAAGGAGATTGGATGCTTGTTGGCGATGTTCCGTGGGGGATGTTTATTGGTTCAGTGAGAAGGCTCCGGATAATGAAAACATCGGAGGCTACTGGTAAAGGTACATTTACTGATTCGATCAAATCCTGATATCTGTATTAAAATCATTGTTTTGTCGTTGTGACCGTGTTTGTGTGATCCTTGTTTACAGCTCAGATGATATTATGAAGCAAATAATAATCTACGAAGAACCCTTTATGTTTGAAGCAGTAATAAGACAGATCACAGATCAAAGAGAAGACAAAAACATTGTAAGAAGCTTCTTCTTCTTCTCTCCCCTTTACAGTTTCTTTTTTGGCTCTGCCATTTTTCTTTTAGTTAGTTATATGTTCTCTTTGTAAATCACACTTTAAAAATCTATAAGAAAACCCTTTCTTGCAC
CDS Sequence
Protein Sequence