Information report for AT4G28490
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- CS31093 — No visible mutant phenotype.
- CS31094 — No visible mutant phenotype.
- CS69916 — Suppresses the floral organ abscission defects of hae-3 hsl2-3.
- CS69917 — Blocks the effect of the serk1-L326F mutation, and leads to floral organ abscission deficiency.
- SALK_021905C — same as smb-3 single mutant
Functional Keywords
Literature and News
- Isolation of a cDNA encoding a novel leucine-rich repeat motif from Sorghum bicolor inoculated with fungi. DOI: 10.1094/mpmi-9-0819 ; PMID: 8969530
- Plant receptor-like kinase gene family: diversity, function, and signaling. DOI: 10.1126/stke.2001.113.re22 ; PMID: 11752632
- Ethylene-dependent and -independent pathways controlling floral abscission are revealed to converge using promoter::reporter gene constructs in the ida abscission mutant. DOI: 10.1093/jxb/erl130 ; PMID: 16990374
- Interactions between the S-domain receptor kinases and AtPUB-ARM E3 ubiquitin ligases suggest a conserved signaling pathway in Arabidopsis. DOI: 10.1104/pp.108.123380 ; PMID: 18552232
- The EPIP peptide of INFLORESCENCE DEFICIENT IN ABSCISSION is sufficient to induce abscission in arabidopsis through the receptor-like kinases HAESA and HAESA-LIKE2. DOI: 10.1105/tpc.108.059139 ; PMID: 18660431
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Regulation of floral organ abscission in Arabidopsis thaliana. DOI: 10.1073/pnas.0805539105 ; PMID: 18809915
- Identification of a putative receptor-ligand pair controlling cell separation in plants. DOI: 10.4161/psb.3.12.7009 ; PMID: 19704449
- PEPR2 is a second receptor for the Pep1 and Pep2 peptides and contributes to defense responses in Arabidopsis. DOI: 10.1105/tpc.109.068874 ; PMID: 20179141
- The SERK1 receptor-like kinase regulates organ separation in Arabidopsis flowers. DOI: 10.1111/j.1365-313X.2010.04194.x ; PMID: 20230490
- Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system. DOI: 10.1016/j.phytochem.2011.02.029 ; PMID: 21477822
- CAST AWAY, a membrane-associated receptor-like kinase, inhibits organ abscission in Arabidopsis. DOI: 10.1104/pp.111.175224 ; PMID: 21628627
- KNAT1, KNAT2 and KNAT6 act downstream in the IDA-HAE/HSL2 signaling pathway to regulate floral organ abscission. DOI: 10.4161/psb.7.1.18379 ; PMID: 22301980
- Transcriptional profiling of the Arabidopsis abscission mutant hae hsl2 by RNA-Seq. DOI: 10.1186/1471-2164-14-37 ; PMID: 23327667
- Floral organ abscission peptide IDA and its HAE/HSL2 receptors control cell separation during lateral root emergence. DOI: 10.1073/pnas.1210835110 ; PMID: 23479623
- NEVERSHED and INFLORESCENCE DEFICIENT IN ABSCISSION are differentially required for cell expansion and cell separation during floral organ abscission in Arabidopsis thaliana. DOI: 10.1093/jxb/ert232 ; PMID: 23963677
- IDA: a peptide ligand regulating cell separation processes in Arabidopsis. DOI: 10.1093/jxb/ert338 ; PMID: 24151306
- Floral organ abscission is regulated by a positive feedback loop. DOI: 10.1073/pnas.1423595112 ; PMID: 25730871
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Conservation of the abscission signaling peptide IDA during Angiosperm evolution: withstanding genome duplications and gain and loss of the receptors HAE/HSL2. DOI: 10.3389/fpls.2015.00931 ; PMID: 26579174
- Ligand-Induced Receptor-like Kinase Complex Regulates Floral Organ Abscission in Arabidopsis. DOI: 10.1016/j.celrep.2016.01.023 ; PMID: 26854226
- Core Mechanisms Regulating Developmentally Timed and Environmentally Triggered Abscission. DOI: 10.1104/pp.16.01004 ; PMID: 27468996
- Disrupting ER-associated protein degradation suppresses the abscission defect of a weak hae hsl2 mutant in Arabidopsis. DOI: 10.1093/jxb/erw313 ; PMID: 27566817
- IDL6-HAE/HSL2 impacts pectin degradation and resistance to Pseudomonas syringae pv tomato DC3000 in Arabidopsis leaves. DOI: 10.1111/tpj.13380 ; PMID: 27618493
- HAESA and HAESA-LIKE2 activate organ abscission downstream of NEVERSHED and EVERSHED in Arabidopsis flowers. DOI: 10.4161/psb.29115 ; PMID: 25763490
- Leaf shedding as an anti-bacterial defense in Arabidopsis cauline leaves. DOI: 10.1371/journal.pgen.1007132 ; PMID: 29253890
- Activation of Self-Incompatibility Signaling in Transgenic Arabidopsis thaliana Is Independent of AP2-Based Clathrin-Mediated Endocytosis. DOI: 10.1534/g3.118.200231 ; PMID: 29720392
- Hypermorphic SERK1 Mutations Function via a SOBIR1 Pathway to Activate Floral Abscission Signaling. DOI: 10.1104/pp.18.01328 ; PMID: 30975695
- Control of Organ Abscission and Other Cell Separation Processes by Evolutionary Conserved Peptide Signaling. DOI: 10.3390/plants8070225 ; PMID: 31311120
- Differential expression of IDA (INFLORESCENCE DEFICIENT IN ABSCISSION)-like genes in Nicotiana benthamiana during corolla abscission, stem growth and water stress. DOI: 10.1186/s12870-020-2250-8 ; PMID: 31959115
- Control of Root Stem Cell Differentiation and Lateral Root Emergence by CLE16/17 Peptides in Arabidopsis. DOI: 10.3389/fpls.2022.869888 ; PMID: 35519820
- MSD2-mediated ROS metabolism fine-tunes the timing of floral organ abscission in Arabidopsis. DOI: 10.1111/nph.18303 ; PMID: 35689444
- Reevaluation of ethylene role in Arabidopsis cauline leaf abscission induced by water stress and rewatering. DOI: 10.1002/pld3.444 ; PMID: 36091878
Gene Resources
Sequences
cDNA Sequence
- >AT4G28490.1
GTACAGTAGTACTTTGCTCCGTAATCGATTTCACATGGATGTATACTATTGCCTCCTAATTCTTCCAATATCGGAAAACATGTCTCACCCATGTCTTGTCACAGTGCTCGTTTCCCTTTTTGCTTCTACAATTCCTTATAATTACCAATCCATAATTTCGTTTTATTCACAAATCCAAAGCATGAAAAAAGAAGAATAACGATTCCTTTTCCAAAAAAATGCTTTATTGTCTTATTCTCCTCCTATGTCTCTCTTCTACGTATCTACCAAGTCTATCTCTAAACCAAGATGCCACCATTCTCCGGCAAGCCAAACTGGGCTTATCCGACCCGGCCCAGTCCCTATCTTCATGGTCCGACAACAACGACGTCACCCCATGCAAGTGGCTAGGCGTGAGCTGCGACGCCACGTCAAACGTTGTCTCCGTCGATCTCTCAAGCTTCATGCTCGTCGGACCTTTCCCCTCCATCCTCTGCCACCTTCCTTCTCTCCATTCCCTCTCTCTATATAATAACTCCATCAATGGCTCTCTCTCCGCCGACGACTTCGATACGTGTCACAATCTCATCAGTCTTGATTTATCGGAGAATCTATTGGTTGGATCCATCCCAAAGTCACTTCCTTTCAATCTCCCAAACCTCAAGTTCCTTGAAATCTCCGGAAACAACTTATCAGACACGATCCCGTCGAGCTTCGGAGAGTTTCGAAAGCTTGAGTCTTTAAACCTCGCCGGTAACTTCCTCTCCGGTACAATTCCCGCCTCTCTCGGTAACGTCACGACTCTTAAAGAACTCAAACTCGCTTACAATTTGTTTTCTCCGAGTCAAATCCCGAGTCAACTCGGAAACCTCACGGAGCTCCAAGTTCTCTGGCTCGCCGGCTGCAACCTCGTCGGTCCGATACCTCCGTCTCTGTCCCGGTTAACTAGTTTGGTTAACTTGGATTTGACATTTAACCAACTCACAGGATCTATCCCAAGTTGGATCACGCAGCTAAAAACCGTCGAGCAAATCGAACTATTCAACAACTCGTTCTCAGGCGAGTTACCAGAATCCATGGGTAACATGACGACGCTAAAAAGATTCGACGCGTCGATGAATAAGCTGACAGGAAAAATACCCGACAACTTGAATCTGTTAAACCTCGAGTCACTCAATCTCTTCGAGAACATGCTCGAAGGTCCTTTACCGGAGAGCATAACTCGCTCCAAAACCTTGTCAGAACTCAAGCTTTTCAACAACAGACTCACCGGAGTATTACCGAGTCAACTCGGCGCTAACTCACCGTTACAGTACGTGGACTTATCGTATAACCGATTTTCCGGCGAAATACCGGCGAATGTCTGCGGTGAAGGGAAGCTAGAGTATCTAATTCTTATAGACAATTCGTTTTCAGGAGAAATCTCTAATAATCTCGGAAAGTGTAAGAGCTTGACCCGGGTCCGATTGAGTAACAACAAGCTTTCGGGTCAAATCCCACATGGATTCTGGGGATTGCCTCGCTTGTCACTTCTCGAACTCTCTGACAATTCGTTCACCGGAAGTATTCCTAAGACGATCATCGGCGCGAAGAATCTATCGAACCTACGAATCTCAAAGAATCGATTTTCAGGTTCAATCCCCAACGAAATCGGATCGCTTAACGGAATAATCGAGATTTCCGGAGCGGAGAATGATTTCTCCGGTGAGATTCCTGAAAGCTTGGTGAAATTGAAGCAATTGAGCAGGCTTGATCTCAGTAAGAATCAACTCTCCGGTGAGATTCCTAGAGAACTTCGTGGTTGGAAGAATCTAAACGAGCTTAATTTGGCTAATAATCATCTCTCCGGTGAAATCCCTAAAGAAGTCGGAATCTTACCTGTTCTCAATTACCTTGACCTTTCAAGCAATCAATTCTCCGGTGAGATTCCGTTGGAGTTACAGAATCTGAAGCTAAACGTTTTAAACCTTTCGTATAATCACCTCTCCGGTAAAATCCCTCCTCTCTACGCTAATAAAATCTACGCACATGACTTCATCGGAAATCCCGGTTTATGTGTTGATCTCGACGGCCTTTGTCGGAAGATCACACGGTCTAAAAACATCGGCTATGTATGGATTCTTTTAACGATTTTCTTACTCGCCGGTTTGGTTTTCGTTGTCGGGATCGTTATGTTCATTGCCAAGTGTAGAAAACTCAGAGCTTTGAAGAGTTCTACTTTAGCAGCGTCGAAATGGAGATCATTCCACAAGCTTCATTTCAGTGAGCACGAGATAGCTGATTGTCTCGATGAAAAGAACGTAATCGGGTTTGGATCTTCTGGTAAAGTCTATAAAGTTGAGCTTAGAGGTGGAGAAGTTGTAGCTGTGAAGAAACTTAACAAAAGTGTTAAAGGAGGAGATGATGAATACAGTAGTGATTCGTTGAATAGAGATGTTTTTGCAGCGGAGGTTGAAACGTTGGGGACGATTAGGCACAAGAGTATTGTGCGTTTGTGGTGTTGTTGCAGCTCTGGTGATTGTAAGTTGTTGGTGTATGAGTACATGCCTAATGGGAGCTTAGCTGATGTGTTGCATGGTGACCGCAAAGGCGGTGTTGTGTTGGGTTGGCCAGAGCGGTTGAGGATTGCTTTGGACGCTGCCGAGGGTTTATCATACTTGCACCATGATTGTGTTCCTCCCATTGTGCACCGCGATGTGAAGTCGAGTAACATACTGCTAGATAGCGATTATGGGGCTAAAGTTGCTGACTTTGGGATCGCTAAAGTCGGTCAGATGAGTGGTTCCAAAACTCCAGAAGCTATGTCCGGGATCGCCGGTTCTTGTGGTTACATTGCACCAGAATACGTATACACACTTCGGGTGAATGAAAAGAGCGATATCTACAGCTTTGGTGTGGTGCTTTTGGAACTGGTTACAGGGAAGCAACCAACTGATTCAGAACTTGGAGATAAAGATATGGCAAAATGGGTGTGCACTGCACTTGACAAATGCGGTTTAGAACCCGTGATCGATCCCAAACTCGATCTCAAGTTCAAAGAAGAAATTAGTAAAGTCATTCACATTGGTCTACTCTGTACGAGTCCTCTCCCTCTAAACAGACCTTCCATGAGAAAAGTTGTGATCATGCTTCAAGAAGTCTCTGGTGCTGTTCCTTGTAGCAGTCCAAACACATCTAAACGATCTAAAACCGGTGGGAAACTCTCGCCTTACTACACGGAAGACTTGAACAGCGTTTGAACATTCCAATATGGGCTGAGAATCGGTTTGGGCCGGGGATAGCAATTTGATGTTATGATGCTAGGTGAACTGTAAGAAAGATATCAAAAACAGAAAAGTGGAGCTTTCTGATTAGGTAATTGCTCTTAAAGCTAATATAAAGTTATAATTTGGATATTAATTTTAATTTAACGCAATATTTGCAATATTTGGTGGTTGGTCCACCCAATAGCCAACCTTATTTAAACTCGAGCTCGTTACCAGTTCAATTTTGGAAAACGGATCGATTCTGACGAGTGATGATCAATATTTTTTTTTCTAATTTTTTTTTCATATTCTTATAAAGTAAAACTTAGTGTGGTAATACTAATGCCATTATAAAAAGTAAATTCTAAATAGCCAAGCATAGACAGCATATGTCAGTATAATGTGGTTAGATAGATTTCTTGAATGACACCTTGCCGCGGTTTCGATCCACCAATGAAAACAACAAGCTAACCACAAAATTTTCCA
CDS Sequence
Protein Sequence