Information report for AT4G28250
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Expansins: ever-expanding numbers and functions. DOI: 10.1016/s1369-5266(00)00211-9 ; PMID: 11641069
- Plant expansins are a complex multigene family with an ancient evolutionary origin. DOI: 10.1104/pp.010658 ; PMID: 11891242
- Comparative genomics in salt tolerance between Arabidopsis and aRabidopsis-related halophyte salt cress using Arabidopsis microarray. DOI: 10.1104/pp.104.039909 ; PMID: 15247402
- Microarray analysis of genes that respond to gamma-irradiation in Arabidopsis. DOI: 10.1021/jf0486895 ; PMID: 15713015
- DNA array analyses of Arabidopsis thaliana lacking a vacuolar Na+/H+ antiporter: impact of AtNHX1 on gene expression. DOI: 10.1111/j.1365-313X.2004.02253.x ; PMID: 15546358
- Genome-wide expression profiling of the host response to root-knot nematode infection in Arabidopsis. DOI: 10.1111/j.1365-313X.2005.02532.x ; PMID: 16236154
- Delayed embryo development in the ARABIDOPSIS TREHALOSE-6-PHOSPHATE SYNTHASE 1 mutant is associated with altered cell wall structure, decreased cell division and starch accumulation. DOI: 10.1111/j.1365-313X.2006.02662.x ; PMID: 16553896
- Expansins are involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2006.02856.x ; PMID: 16942607
- The Populus homeobox gene ARBORKNOX1 reveals overlapping mechanisms regulating the shoot apical meristem and the vascular cambium. DOI: 10.1007/s11103-006-0059-y ; PMID: 16927204
- Genome-wide expression profiling of ARABIDOPSIS RESPONSE REGULATOR 7(ARR7) overexpression in cytokinin response. DOI: 10.1007/s00438-006-0177-x ; PMID: 17061125
- Rhizobacterial volatile emissions regulate auxin homeostasis and cell expansion in Arabidopsis. DOI: 10.1007/s00425-007-0530-2 ; PMID: 17497164
- Phosphatidylinositol 4-kinase activation is an early response to salicylic acid in Arabidopsis suspension cells. DOI: 10.1104/pp.107.100842 ; PMID: 17496105
- Arabidopsis thaliana plants acclimated to low dose rates of ultraviolet B radiation show specific changes in morphology and gene expression in the absence of stress symptoms. DOI: 10.1111/j.1469-8137.2007.02092.x ; PMID: 17587374
- Genome-wide interacting effects of sucrose and herbicide-mediated stress in Arabidopsis thaliana: novel insights into atrazine toxicity and sucrose-induced tolerance. DOI: 10.1186/1471-2164-8-450 ; PMID: 18053238
- General detoxification and stress responses are mediated by oxidized lipids through TGA transcription factors in Arabidopsis. DOI: 10.1105/tpc.107.054809 ; PMID: 18334669
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- γ-Aminobutyric acid transaminase deficiency impairs central carbon metabolism and leads to cell wall defects during salt stress in Arabidopsis roots. DOI: 10.1111/pce.12033 ; PMID: 23148892
- Identification of genes involved in the ACC-mediated control of root cell elongation in Arabidopsis thaliana. DOI: 10.1186/1471-2229-12-208 ; PMID: 23134674
- Expansins: ever-expanding numbers and functions. DOI: 10.1016/s1369-5266(00)00211-9 ; PMID: 11641069
- General detoxification and stress responses are mediated by oxidized lipids through TGA transcription factors in Arabidopsis. DOI: 10.1105/tpc.107.054809 ; PMID: 18334669
Gene Resources
- UniProt: A0A1P8B980
- EMBL: CP002687
- AlphaFoldDB: A0A1P8B980
- EnsemblPlants: AT4G28250.4
- Gramene: AT4G28250.4
- ExpressionAtlas: AT4G28250
- InterPro: IPR005795, IPR007112, IPR007117
- PANTHER: PTHR31692, PTHR31692:SF5
- SUPFAM: SSF49590, SSF50685
- PROSITE: PS50842
- Gene3D: 2.40.40.10, 2.60.40.760
- OrthoDB: A0A1P8B980
- SWISS-MODEL: A0A1P8B980
- Conserved Domain Database: cd22275
Sequences
cDNA Sequence
- >AT4G28250.4
AACAACAACAACATTGACATATCAATTCACACATAAACTCACTCTCACTCTCTCACTGTCGGCAAACTAACTTATTCACTTTTCCGGCACTGATTCTGCTCGGGAAAAACAACTCCGGCACAAAATGCAGCTTTTTCCAGTCATGTTAGCCACACTCTGCATTGTCCTGCAGCTTCTCATTGGCTCGTCAGCTTTGGCTACGACAAATCGCCACGTGTCAAACTCTCATTGGCTTCCCGCAGTAGCTACATGGTACGGAAGCCCCAACGGTGACGGCAGCGACGGAGGAGCGTGTGGTTACGGTACGTTGGTGGATGTGAAGCCGTTACATGCGAGGGTTGGAGCGGTGAATCCAATTCTCTTCAAAAATGGTGAAGGTTGCGGAGCTTGTTACAAGGTTCGATGCTTGGACAAGAGCATTTGTTCCCGGAGAGCCGTTACCGTCATAATTACCGATGAGTGTCCCGGCTGCTCTAAAACCAGCACTCACTTTGACCTCAGTGGTGCCGTCTTTGGCCGGTTAGCTATTGCCGGAGAGTCAGGGCCTCTCCGTAACCGTGGACTAATCCCAGTCATTTATCGCCGAGGGAAGAACATAGCATTCCATGTGAACGAAGGATCAACTGATTTTTGGCTATCTCTGCTGGTCGAGTTTGAAGATGGAGAAGGAGACATTGGCTCCATGCACATTCGCCAAAAAAAGGAGGAAACGAATCTCAGTGGAGTGAGCACATGTATGGATCTTTTATTGACCAGCTAGCTAAAAAGGCACACCACATCACTCAAAGTCTTCTAAAAAGTAACAATAAAAACAGACTCAAAGTGTAAAGACTGATGGGCTTTCTTGTGTTTTGTGAATGTTT - >AT4G28250.2
AACAACAACAACATTGACATATCAATTCACACATAAACTCACTCTCACTCTCTCACTGTCGGCAAACTAACTTATTCACTTTTCCGGCACTGATTCTGCTCGGGAAAAACAACTCCGGCACAAAATGCAGCTTTTTCCAGTCATGTTAGCCACACTCTGCATTGTCCTGCAGCTTCTCATTGGCTCGTCAGCTTTGGCTACGACAAATCGCCACGTGTCAAACTCTCATTGGCTTCCCGCAGTAGCTACATGGTACGGAAGCCCCAACGGTGACGGCAGCGACGGAGGAGCGTGTGGTTACGGTACGTTGGTGGATGTGAAGCCGTTACATGCGAGGGTTGGAGCGGTGAATCCAATTCTCTTCAAAAATGGTGAAGGTTGCGGAGCTTGTTACAAGGTTCGATGCTTGGACAAGAGCATTTGTTCCCGGAGAGCCGTTACCGTCATAATTACCGATGAGTGTCCCGGCTGCTCTAAAACCAGCACTCACTTTGACCTCAGTGGTGCCGTCTTTGGCCGGTTAGCTATTGCCGGAGAGTCAGGGCCTCTCCGTAACCGTGGACTAATCCCAGTCATTTATCGCCGAGGGAAGAACATAGCATTCCATGTGAACGAAGGATCAACTGATTTTTGGCTATCTCTGCTGGTCGAGTTTGAAGATGGAGAAGGAGACATTGGCTCCATGCACATTCGCCAAAAAAAGGAGGAAACGAATCTCAGTGGAGTGAGCACATGTATGGATCTTTTATTGACCAGCTAGCTAAAAAGGCACACCACATCACTCAAAGTCTTCTAAAAAGTAACAATAAAAACAGACTCAAAGTGTAAAGACTGATGGGCTTTCTTGTGTTTTGTGAATGTTT - >AT4G28250.3
AACAACAACAACATTGACATATCAATTCACACATAAACTCACTCTCACTCTCTCACTGTCGGCAAACTAACTTATTCACTTTTCCGGCACTGATTCTGCTCGGGAAAAACAACTCCGGCACAAAATGCAGCTTTTTCCAGTCATGTTAGCCACACTCTGCATTGTCCTGCAGCTTCTCATTGGCTCGTCAGCTTTGGCTACGACAAATCGCCACGTGTCAAACTCTCATTGGCTTCCCGCAGTAGCTACATGGTACGGAAGCCCCAACGGTGACGGCAGCGACGGAGGAGCGTGTGGTTACGGTACGTTGGTGGATGTGAAGCCGTTACATGCGAGGGTTGGAGCGGTGAATCCAATTCTCTTCAAAAATGGTGAAGGTTGCGGAGCTTGTTACAAGGTTCGATGCTTGGACAAGAGCATTTGTTCCCGGAGAGCCGTTACCGTCATAATTACCGATGAGTGTCCCGGCTGCTCTAAAACCAGCACTCACTTTGACCTCAGTGGTGCCGTCTTTGGCCGGTTAGCTATTGCCGGAGAGTCAGGGCCTCTCCGTAACCGTGGACTAATCCCAGTCATTTATCGCCGAGGGAAGAACATAGCATTCCATGTGAACGAAGGATCAACTGATTTTTGGCTATCTCTGCTGGTCGAGTTTGAAGATGGAGAAGGAGACATTGGCTCCATGCACATTCGCCAAAAAAAGGAGGAAACGAATCTCAGTGGAGTGAGCACATGTATGGATCTTTTATTGACCAGCTAGCTAAAAAGGCACACCACATCACTCAAAGTCTTCTAAAAAGTAACAATAAAAACAGACTCAAAGTGTAAAGACTGATGGGCTTTCTTGTGTTTTGTGAATGTTT - >AT4G28250.1
AACAACAACAACATTGACATATCAATTCACACATAAACTCACTCTCACTCTCTCACTGTCGGCAAACTAACTTATTCACTTTTCCGGCACTGATTCTGCTCGGGAAAAACAACTCCGGCACAAAATGCAGCTTTTTCCAGTCATGTTAGCCACACTCTGCATTGTCCTGCAGCTTCTCATTGGCTCGTCAGCTTTGGCTACGACAAATCGCCACGTGTCAAACTCTCATTGGCTTCCCGCAGTAGCTACATGGTACGGAAGCCCCAACGGTGACGGCAGCGACGGAGGAGCGTGTGGTTACGGTACGTTGGTGGATGTGAAGCCGTTACATGCGAGGGTTGGAGCGGTGAATCCAATTCTCTTCAAAAATGGTGAAGGTTGCGGAGCTTGTTACAAGGTTCGATGCTTGGACAAGAGCATTTGTTCCCGGAGAGCCGTTACCGTCATAATTACCGATGAGTGTCCCGGCTGCTCTAAAACCAGCACTCACTTTGACCTCAGTGGTGCCGTCTTTGGCCGGTTAGCTATTGCCGGAGAGTCAGGGCCTCTCCGTAACCGTGGACTAATCCCAGTCATTTATCGCCGAGGGAAGAACATAGCATTCCATGTGAACGAAGGATCAACTGATTTTTGGCTATCTCTGCTGGTCGAGTTTGAAGATGGAGAAGGAGACATTGGCTCCATGCACATTCGCCAAAAAAAGGAGGAAACGAATCTCAGTGGAGTGAGCACATGTATGGATCTTTTATTGACCAGCTAGCTAAAAAGGCACACCACATCACTCAAAGTCTTCTAAAAAGTAACAATAAAAACAGACTCAAAGTGTAAAGACTGATGGGCTTTCTTGTGTTTTGTGAATGTTT
CDS Sequence
Protein Sequence