Information report for AT4G28220
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009049 — inflorescence — inflorescencia (Spanish, exact), 花序 (Japanese, exact), Triticeae spike (narrow)
Functional Keywords
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , root , vascular leaf , flower , inflorescence , cotyledon
Literature and News
- Analysis of EF-hand-containing proteins in Arabidopsis. DOI: 10.1186/gb-2002-3-10-research0056 ; PMID: 12372144
- Identification of AtNDI1, an internal non-phosphorylating NAD(P)H dehydrogenase in Arabidopsis mitochondria. DOI: 10.1104/pp.103.029363 ; PMID: 14630960
- Light regulation of the Arabidopsis respiratory chain. Multiple discrete photoreceptor responses contribute to induction of type II NAD(P)H dehydrogenase genes. DOI: 10.1104/pp.104.046698 ; PMID: 15333756
- Characterization of mitochondrial alternative NAD(P)H dehydrogenases in Arabidopsis: intraorganelle location and expression. DOI: 10.1093/pcp/pci221 ; PMID: 16258072
- Characterization of transformed Arabidopsis with altered alternative oxidase levels and analysis of effects on reactive oxygen species in tissue. DOI: 10.1104/pp.105.070763 ; PMID: 16299171
- High rate of recent intron gain and loss in simultaneously duplicated Arabidopsis genes. DOI: 10.1093/molbev/msl017 ; PMID: 16720694
- Characterization of the regulatory and expression context of an alternative oxidase gene provides insights into cyanide-insensitive respiration during growth and development. DOI: 10.1104/pp.106.091819 ; PMID: 17322330
- The absence of ALTERNATIVE OXIDASE1a in Arabidopsis results in acute sensitivity to combined light and drought stress. DOI: 10.1104/pp.107.115121 ; PMID: 18424626
- Type II NAD(P)H dehydrogenases are targeted to mitochondria and chloroplasts or peroxisomes in Arabidopsis thaliana. DOI: 10.1016/j.febslet.2008.07.061 ; PMID: 18703057
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- Complex I dysfunction redirects cellular and mitochondrial metabolism in Arabidopsis. DOI: 10.1104/pp.108.125880 ; PMID: 18784283
- AtNDB2 Is the Main External NADH Dehydrogenase in Mitochondria and Is Important for Tolerance to Environmental Stress. DOI: 10.1104/pp.19.00877 ; PMID: 31409698
- Ca2+-binding and Ca2+-independent respiratory NADH and NADPH dehydrogenases of Arabidopsis thaliana. DOI: 10.1074/jbc.M704674200 ; PMID: 17673460
Gene Resources
- UniProt: A0A178UX29
- EMBL: CACRSJ010000109, LUHQ01000004
- AlphaFoldDB: A0A178UX29
- EnsemblPlants: AT4G28220.1
- Gramene: AT4G28220.1
- KEGG: ath:AT4G28220
- ExpressionAtlas: AT4G28220
- InterPro: IPR002048, IPR011992, IPR018247
- PANTHER: PTHR43706, PTHR43706:SF3
- SUPFAM: SSF47473, SSF51905
- PROSITE: PS00018, PS50222
- Gene3D: 3.50.50.100
- SWISS-MODEL: A0A178UX29
Sequences
cDNA Sequence
- >AT4G28220.1
TCTCATTTAGTCCGCATTTTCTTTGTATTGTTCGATTTCTATAGTTATTTTTCACCTGTGTACATGGTTTTACTGTTTTGGGGGAGAAAGGATTTGTTTTTAGATTGCCTCACATCACCTTTAGCTTGTTTTCGATATAAAACCACGGAAACAAAGCTAGTCTTCGAGGCATATATTGAACTGCGGTGTTAACGTGGAGGCATACTTGTTCATCATAGTTTAGCCTCTAAAATTATCCGCTAAACCACTTCATTTTCATTTATTCGTTTTTGCCTTTGTTTTTTGTTTTCCAGATTTGGCATTTGTCTGAAACTGGCTAATTATGAGCAAAATCATTTGGAATCTGTGAATCAAAATAGTCGCTTGTTCTTGACCCGGTTGAATTCGATGTGAATTGGATCGATTGCTAAACAAACAAAAACGAGGACAGCTTGAATTTGTGGGATTAATAGAGTGTTGCCATTCTTGTGGGCTTTGGACCTTGGATGTGTGCTGATTTATAAACTGACCCTTCTACCAAATTTTGTGTTGCGACATAAACTTGAATCTGACGACATATCCATGTGCAACATCAATATAATAGTTCTTATTTAATCACACATAATTGGTTGCACGATTTCCGAATGGCACAAGCTAATCAATTGTAACTAACTTAAGCTAATCAATTGTATGTAACTTGAATAATCAATCGACCAGATAAAAAAAGGAGACTTTGTATCCACGACATCTGGATTATGGAGACACTAAGCGTTTTTAATTAGTGAAAAGTCGCTACTAAAGCTCAGTACTTGAACTCGGTCAGAGGTTTCTCTTGGATCTCTTCAACTTTGTCTTCTCAGAATCAAACCTCTGAAGACTTTTCACCAAAATGACATTACTTTCCTCTCTCGGAAGAGCCTCTCGATCTGCTCCACTTGCCTCTAAGCTCCTCCTCCTCGGCACTCTCAGCGGTGGAAGTATAGTGGCATACGCTGATGCTAACGAAGAAGCTAACAAAAAGGAGGAGCATAAGAAGAAGAAAGTAGTTGTGCTTGGGACTGGTTGGGCTGGTATAAGTTTCCTTAAAGATCTCGACATAACTTCCTACGATGTTCAGGTTGTGTCTCCCCAGAACTACTTTGCCTTTACGCCATTGTTACCTAGCGTCACTTGTGGAACTGTTGAAGCTAGAAGCATTGTGGAGTCTGTCCGTAATATAACCAAGAAGAAAAATGGGGAAATTGAATTGTGGGAAGCAGATTGTTTTAAGATTGATCATGTTAATCAGAAGGTTCACTGTCGACCAGTTTTCAAGGATGATCCTGAAGCAAGCCAAGAATTTTCCCTTGGATATGACTACTTGATCGTAGCAGTGGGAGCTCAAGTTAACACATTTGGCACTCCTGGTGTACTTGAGAATTGCCATTTTCTCAAGGAAGTAGAGGATGCACAGAGGATTCGTAGAGGAGTGATTGATTGCTTTGAAAAAGCAATCCTTCCTGGCCTCACTGAGGAACAAAGAAGAAGAAAGCTTCATTTTGTAATCGTGGGAGGAGGTCCTACTGGTGTGGAGTTTGCAGCTGAGCTACATGACTTTATTATAGAGGATATCACCAAAATATACCCTTCAGTCAAAGAGCTCGTAAAAATAACACTCATTCAATCTGGAGACCATATTCTGAATACGTTTGATGAACGTATCAGTTCATTTGCTGAACAAAAGTTCACGCGAGATGGTATTGATGTTCAGACTGGAATGCGTGTAATGTCTGTGACTGATAAAGATATCACAGTGAAAGTCAAATCAAGTGGAGAACTCGTAAGTATTCCTCATGGATTGATATTGTGGTCCACTGGAGTTGGAACCCGTCCAGTTATCAGCGACTTCATGGAGCAAGTTGGCCAAGGAGGCAGACGTGCGGTGGCAACTAACGAGTGGTTACAAGTGACAGGATGTGAGAATGTATATGCAGTTGGCGATTGTGCTTCCATAGCTCAACGAAAAATCTTGGGGGATATTGCAAACATATTCAAAGCTGCAGATGCGGACAACTCAGGAACCTTGACCATGGAAGAGTTAGAAGGCGTGGTTGATGATATTATTGTGAGGTATCCGCAGGTGGAGCTCTACCTGAAAAGCAAGCATATGAGGCATATTAACGATCTGCTGGCAGATTCTGAAGGAAATGCAAGGAAAGAAGTAGACATTGAGGCATTCAAATTGGCTCTCTCGGAGGCTGATTCACAGATGAAAACCCTGCCTGCAACTGCTCAGGTCGCTGCCCAGCAAGGTGCTTATCTTGCAAAATGCTTCAACAGGATGGAGCAGTGTAAAGAGCTACCTGAAGGTCCTAAGCGCTTCAGAACTGGCGGGCATCATCAGTTTCGCCCCTTCCAGTACAAGCACTTTGGACAATTTGCTCCACTAGGAGGGGACCAAGCAGCAGCTGAACTACCTGGAGACTGGGTTTCAGCTGGAAAAAGCGCCCAGTGGCTCTGGTATTCTGTTTATGCCAGCAAGCAAGTTAGCTGGCGAACGAGGGCTCTGGTGGTGTCGGACTGGACAAGGAGGTACATATTCGGGAGGGATTCAAGCCGCATCTGACTCAATACTGCATTTTGTAATGTGTTTAAGAGGAAACCAAGATACAGTCTCTCTCTTTTTCGTTTGTTTTTGGTGTAAATTTCACAAAGCTGTGGCCAAACTTCTTGTTTGTGAGTGGCAAAGCAAAAACCTTTTGAAAGAATCTTTCTTCATGAAGCTGACATTTACAAAAGATAACAA - >AT4G28220.2
TCTCATTTAGTCCGCATTTTCTTTGTATTGTTCGATTTCTATAGTTATTTTTCACCTGTGTACATGGTTTTACTGTTTTGGGGGAGAAAGGATTTGTTTTTAGATTGCCTCACATCACCTTTAGCTTGTTTTCGATATAAAACCACGGAAACAAAGCTAGTCTTCGAGGCATATATTGAACTGCGGTGTTAACGTGGAGGCATACTTGTTCATCATAGTTTAGCCTCTAAAATTATCCGCTAAACCACTTCATTTTCATTTATTCGTTTTTGCCTTTGTTTTTTGTTTTCCAGATTTGGCATTTGTCTGAAACTGGCTAATTATGAGCAAAATCATTTGGAATCTGTGAATCAAAATAGTCGCTTGTTCTTGACCCGGTTGAATTCGATGTGAATTGGATCGATTGCTAAACAAACAAAAACGAGGACAGCTTGAATTTGTGGGATTAATAGAGTGTTGCCATTCTTGTGGGCTTTGGACCTTGGATGTGTGCTGATTTATAAACTGACCCTTCTACCAAATTTTGTGTTGCGACATAAACTTGAATCTGACGACATATCCATGTGCAACATCAATATAATAGTTCTTATTTAATCACACATAATTGGTTGCACGATTTCCGAATGGCACAAGCTAATCAATTGTAACTAACTTAAGCTAATCAATTGTATGTAACTTGAATAATCAATCGACCAGATAAAAAAAGGAGACTTTGTATCCACGACATCTGGATTATGGAGACACTAAGCGTTTTTAATTAGTGAAAAGTCGCTACTAAAGCTCAGTACTTGAACTCGGTCAGAGGTTTCTCTTGGATCTCTTCAACTTTGTCTTCTCAGAATCAAACCTCTGAAGACTTTTCACCAAAATGACATTACTTTCCTCTCTCGGAAGAGCCTCTCGATCTGCTCCACTTGCCTCTAAGCTCCTCCTCCTCGGCACTCTCAGCGGTGGAAGTATAGTGGCATACGCTGATGCTAACGAAGAAGCTAACAAAAAGGAGGAGCATAAGAAGAAGAAAGTAGTTGTGCTTGGGACTGGTTGGGCTGGTATAAGTTTCCTTAAAGATCTCGACATAACTTCCTACGATGTTCAGGTTGTGTCTCCCCAGAACTACTTTGCCTTTACGCCATTGTTACCTAGCGTCACTTGTGGAACTGTTGAAGCTAGAAGCATTGTGGAGTCTGTCCGTAATATAACCAAGAAGAAAAATGGGGAAATTGAATTGTGGGAAGCAGATTGTTTTAAGATTGATCATGTTAATCAGAAGGTTCACTGTCGACCAGTTTTCAAGGATGATCCTGAAGCAAGCCAAGAATTTTCCCTTGGATATGACTACTTGATCGTAGCAGTGGGAGCTCAAGTTAACACATTTGGCACTCCTGGTGTACTTGAGAATTGCCATTTTCTCAAGGAAGTAGAGGATGCACAGAGGATTCGTAGAGGAGTGATTGATTGCTTTGAAAAAGCAATCCTTCCTGGCCTCACTGAGGAACAAAGAAGAAGAAAGCTTCATTTTGTAATCGTGGGAGGAGGTCCTACTGGTGTGGAGTTTGCAGCTGAGCTACATGACTTTATTATAGAGGATATCACCAAAATATACCCTTCAGTCAAAGAGCTCGTAAAAATAACACTCATTCAATCTGGAGACCATATTCTGAATACGTTTGATGAACGTATCAGTTCATTTGCTGAACAAAAGTTCACGCGAGATGGTATTGATGTTCAGACTGGAATGCGTGTAATGTCTGTGACTGATAAAGATATCACAGTGAAAGTCAAATCAAGTGGAGAACTCGTAAGTATTCCTCATGGATTGATATTGTGGTCCACTGGAGTTGGAACCCGTCCAGTTATCAGCGACTTCATGGAGCAAGTTGGCCAAGGAGGCAGACGTGCGGTGGCAACTAACGAGTGGTTACAAGTGACAGGATGTGAGAATGTATATGCAGTTGGCGATTGTGCTTCCATAGCTCAACGAAAAATCTTGGGGGATATTGCAAACATATTCAAAGCTGCAGATGCGGACAACTCAGGAACCTTGACCATGGAAGAGTTAGAAGGCGTGGTTGATGATATTATTGTGAGGTATCCGCAGGTGGAGCTCTACCTGAAAAGCAAGCATATGAGGCATATTAACGATCTGCTGGCAGATTCTGAAGGAAATGCAAGGAAAGAAGTAGACATTGAGGCATTCAAATTGGCTCTCTCGGAGGCTGATTCACAGATGAAAACCCTGCCTGCAACTGCTCAGGTCGCTGCCCAGCAAGGTGCTTATCTTGCAAAATGCTTCAACAGGATGGAGCAGTGTAAAGAGCTACCTGAAGGTCCTAAGCGCTTCAGAACTGGCGGGCATCATCAGTTTCGCCCCTTCCAGTACAAGCACTTTGGACAATTTGCTCCACTAGGAGGGGACCAAGCAGCAGCTGAACTACCTGGAGACTGGGTTTCAGCTGGAAAAAGCGCCCAGTGGCTCTGGTATTCTGTTTATGCCAGCAAGCAAGTTAGCTGGCGAACGAGGGCTCTGGTGGTGTCGGACTGGACAAGGAGGTACATATTCGGGAGGGATTCAAGCCGCATCTGACTCAATACTGCATTTTGTAATGTGTTTAAGAGGAAACCAAGATACAGTCTCTCTCTTTTTCGTTTGTTTTTGGTGTAAATTTCACAAAGCTGTGGCCAAACTTCTTGTTTGTGAGTGGCAAAGCAAAAACCTTTTGAAAGAATCTTTCTTCATGAAGCTGACATTTACAAAAGATAACAA
CDS Sequence
Protein Sequence