Information report for AT4G28110
Gene Details
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Functional Descriptions
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0045892 — acts upstream of or within — negative regulation of DNA-templated transcription
- GO:0005634 — located in — nucleus
- GO:0080090 — acts upstream of or within — regulation of primary metabolic process
- GO:0009825 — acts upstream of or within — multidimensional cell growth
- GO:0080091 — acts upstream of or within — regulation of raffinose metabolic process
- GO:0005515 — enables — protein binding
- GO:0010143 — acts upstream of or within — cutin biosynthetic process
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The R2R3-MYB gene family in Arabidopsis thaliana. DOI: 10.1016/s1369-5266(00)00199-0 ; PMID: 11597504
- Transcriptome profiling of sulfur-responsive genes in Arabidopsis reveals global effects of sulfur nutrition on multiple metabolic pathways. DOI: 10.1104/pp.102.019802 ; PMID: 12805590
- The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family. DOI: 10.1007/s11103-005-2910-y ; PMID: 16463103
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
- Phosphorylation by AtMPK6 is required for the biological function of AtMYB41 in Arabidopsis. DOI: 10.1016/j.bbrc.2012.04.137 ; PMID: 22575450
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family. DOI: 10.1007/s11103-005-2910-y ; PMID: 16463103
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
Gene Resources
- UniProt: A0A178V452
- EMBL: CACRSJ010000109, CACSHJ010000095, LR881469
- AlphaFoldDB: A0A178V452
- EnsemblPlants: AT4G28110.1
- Gramene: AT4G28110.1
- KEGG: ath:AT4G28110
- Orthologous matrix: DFGFPDN
- ExpressionAtlas: AT4G28110
- InterPro: IPR001005, IPR009057, IPR015495
- PANTHER: PTHR47994, PTHR47994:SF5
- SUPFAM: SSF46689
- PROSITE: PS50090, PS51294
- Gene3D: 1.10.10.60
- OrthoDB: A0A178V452
- SWISS-MODEL: A0A178V452
- Conserved Domain Database: cd00167
Sequences
cDNA Sequence
- >AT4G28110.1
TACATCCACACATTGACATTTCTAAAATCCAACTCCTCTTTTTGAAAATTAAGAAACTCCACTTGGCTCTTCGATTTTTTCTATCTAAATAACAGAACCAAATCATTATCGAAATTTAAAGTTGTGCGAAACAAAACAAAGATGGGAAGATCACCTTGTTGTGATAAAAATGGAGTGAAGAAGGGACCATGGACTGCTGAGGAGGATCAGAAACTCATCGATTATATTCGATTTCATGGTCCTGGCAATTGGCGTACGCTCCCCAAAAATGCTGGACTCCATAGATGTGGAAAAAGCTGCCGTCTTCGATGGACCAATTATCTAAGACCGGACATCAAGAGAGGAAGATTCTCGTTCGAGGAAGAAGAAACTATCATTCAGCTACACAGTGTTATGGGAAACAAGTGGTCAGCAATAGCCGCTCGTCTACCAGGGAGGACCGATAACGAAATAAAAAACCATTGGAACACTCACATCCGCAAGAGACTTGTAAGGAGTGGTATCGACCCTGTTACTCATTCTCCACGCCTTGATCTTCTTGATTTGTCCTCACTTTTGAGTGCACTTTTCAACCAGCCAAACTTTTCAGCAGTTGCAACACATGCGTCTTCTCTTCTTAATCCTGATGTATTGAGGTTGGCCTCTCTACTACTGCCACTTCAAAACCCTAATCCAGTTTACCCATCGAACCTCGACCAAAATCTTCAAACTCCAAATACATCATCAGAATCGTCTCAACCACAAGCTGAGACTAGTACAGTCCCAACAAACTATGAAACTTCATCATTGGAGCCTATGAACGCAAGACTCGACGACGTTGGTCTTGCAGATGTATTACCACCTTTGTCAGAGAGTTTTGACTTAGACTCGCTCATGTCAACGCCAATGTCTTCTCCACGACAAAATAGCATTGAAGCAGAAACCAACTCCAGCACTTTCTTCGACTTTGGAATTCCGGAAGATTTCATCTTAGATGACTTTATGTTTTAATTTTCAACATTTGCATACACATGTCTTGCTTTCACACATATGATTCTTTGTTGCATTCTTTCTTTTGTTTGATGTATAAATTTCTTGTTTTTATTCTCTCAAAAGATATTAAGTTATTAGTCTATAAAATTTTCATG - >AT4G28110.2
TACATCCACACATTGACATTTCTAAAATCCAACTCCTCTTTTTGAAAATTAAGAAACTCCACTTGGCTCTTCGATTTTTTCTATCTAAATAACAGAACCAAATCATTATCGAAATTTAAAGTTGTGCGAAACAAAACAAAGATGGGAAGATCACCTTGTTGTGATAAAAATGGAGTGAAGAAGGGACCATGGACTGCTGAGGAGGATCAGAAACTCATCGATTATATTCGATTTCATGGTCCTGGCAATTGGCGTACGCTCCCCAAAAATGCTGGACTCCATAGATGTGGAAAAAGCTGCCGTCTTCGATGGACCAATTATCTAAGACCGGACATCAAGAGAGGAAGATTCTCGTTCGAGGAAGAAGAAACTATCATTCAGCTACACAGTGTTATGGGAAACAAGTGGTCAGCAATAGCCGCTCGTCTACCAGGGAGGACCGATAACGAAATAAAAAACCATTGGAACACTCACATCCGCAAGAGACTTGTAAGGAGTGGTATCGACCCTGTTACTCATTCTCCACGCCTTGATCTTCTTGATTTGTCCTCACTTTTGAGTGCACTTTTCAACCAGCCAAACTTTTCAGCAGTTGCAACACATGCGTCTTCTCTTCTTAATCCTGATGTATTGAGGTTGGCCTCTCTACTACTGCCACTTCAAAACCCTAATCCAGTTTACCCATCGAACCTCGACCAAAATCTTCAAACTCCAAATACATCATCAGAATCGTCTCAACCACAAGCTGAGACTAGTACAGTCCCAACAAACTATGAAACTTCATCATTGGAGCCTATGAACGCAAGACTCGACGACGTTGGTCTTGCAGATGTATTACCACCTTTGTCAGAGAGTTTTGACTTAGACTCGCTCATGTCAACGCCAATGTCTTCTCCACGACAAAATAGCATTGAAGCAGAAACCAACTCCAGCACTTTCTTCGACTTTGGAATTCCGGAAGATTTCATCTTAGATGACTTTATGTTTTAATTTTCAACATTTGCATACACATGTCTTGCTTTCACACATATGATTCTTTGTTGCATTCTTTCTTTTGTTTGATGTATAAATTTCTTGTTTTTATTCTCTCAAAAGATATTAAGTTATTAGTCTATAAAATTTTCATG
CDS Sequence
Protein Sequence