Information report for AT4G27910
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0006357 — involved in — regulation of transcription by RNA polymerase II
- GO:0048188 — part of — Set1C/COMPASS complex
- GO:0040029 — acts upstream of or within — epigenetic regulation of gene expression
- GO:0005634 — located in — nucleus
- GO:0031011 — part of — Ino80 complex
- GO:0040029 — involved in — epigenetic regulation of gene expression
- CS72324 — significantly early flowering and accelerated leaf senescence
Functional Keywords
Literature and News
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- Comparative analysis of SET domain proteins in maize and Arabidopsis reveals multiple duplications preceding the divergence of monocots and dicots. DOI: 10.1104/pp.102.013722 ; PMID: 12805620
- A transcriptome-based characterization of habituation in plant tissue culture. DOI: 10.1104/pp.105.076059 ; PMID: 16489130
- ATX3, ATX4, and ATX5 Encode Putative H3K4 Methyltransferases and Are Critical for Plant Development. DOI: 10.1104/pp.16.01944 ; PMID: 28550207
- Trithorax-group protein ATX5 mediates the glucose response via impacting the HY1-ABI4 signaling module. DOI: 10.1007/s11103-018-0791-0 ; PMID: 30406469
- Gene expression changes occurring at bolting time are associated with leaf senescence in Arabidopsis. DOI: 10.1002/pld3.279 ; PMID: 33204935
- COMPASS functions as a module of the INO80 chromatin remodeling complex to mediate histone H3K4 methylation in Arabidopsis. DOI: 10.1093/plcell/koab187 ; PMID: 34270751
- Arabidopsis Trithorax histone methyltransferases are redundant in regulating development and DNA methylation. DOI: 10.1111/jipb.13406 ; PMID: 36354145
Gene Resources
- UniProt: A0A178UVA2
- EMBL: LUHQ01000004
- AlphaFoldDB: A0A178UVA2
- EnsemblPlants: AT4G27910.1
- Gramene: AT4G27910.1
- KEGG: ath:AT4G27910
- Orthologous matrix: IPHHTRG
- ExpressionAtlas: AT4G27910
- InterPro: IPR000313, IPR001214, IPR001965
- PANTHER: PTHR13793, PTHR13793:SF152
- SUPFAM: SSF57903, SSF63748, SSF82199
- PROSITE: PS01359, PS50016, PS50280
- Gene3D: 2.170.270.10, 2.30.30.140, 3.30.40.10
- SWISS-MODEL: A0A178UVA2
- Conserved Domain Database: cd10518, cd15495, cd15663
Sequences
cDNA Sequence
- >AT4G27910.1
CATGTAAGTTCCATTACAAGCTTCCATAGATTTTCAAACCTCATTAACAAAACATGTATCTGAATTTTCATATCAAATTAAGAAGAGAAACAATTAAATTACAAGAAGAGACACACGATCTTTGAATTGGTTCCGAGAAGAGAAAGAAAACGAGGAAGAAGAAGAAAAAGCGTGTGATGCGCAGGTTAGCTTAATCACAGTAATGTGCACATTCACGCTATTCAGAAGGTGACGCCGATCCAAACGACCCACTTCTTCTGCGTCTTCTCTCTCTTCACCTCTCTGTCTCGCCTTTCTCTCTCTAAAAGAAAAAAATTTCTTACCCAGAACAAATAAAATTTGCCGAAATTTTCAGTCTTTCGATTTAAAACAATTCCTTGACAACATTTCTTCCGGTTTTATCATCCAAATCATAAGAAAGGACGCATTTTTATTTATAAAAATTGGGTCTTTTTTAATCTCTTCTGGAATTTTAAGAGAGAGAGATATAGAGCGAGAGAAGTTAGGAACAGATCTCTTTCTCTTTCTCTTTCACTTTCTCTTTCGCTCATTCGTGCCAAAAGTCTCTTCTTCCATCAAATTTTGTAGCTTTCCTTGTTTGATAGAACGGGTACGCGATTTTCAGTTCTGGGTCAGAGGAATACGGAGGACTTCTCCTCTCCGGAGCATCAGAAATTGAGGTCTAGATTAGGGTTTGTGAGAAAATTCGAGATTTTGGTTGTTGATTCTTAATTGGAACAGTGATGCTCTGAGATTGCTTTTCTGAAATTTGAAGAAGAATGATTATCAAACGGAAATTTAAAACCCAGATACCGAGTTTGGAACGGTGCAAACTCGGTAATGAGTCAAGGAAGAAGAAGAGAAAGTTGAACTTGGGAGGAGGTGGTTACTACTATCCTCTCAATCTTCTCGGAGAAATCGCCGCCGGGATTGTTCCAGGTAATGGACGCAATGGATTCTCTGCTTCCTGGTGCACTGAAGTTACAAAACCTGTTGAGGTGGAAGAGTCATTGTCTAAGAGAAGATCTGATTCCGGTACTGTTAGAGATTCTCCTCCGGCGGAAGTCTCACGTCCACCGCTTGTTCGGACATCTAGGGGAAGAATTCAGGTGCTTCCTTCTCGATTCAATGATTCGGTGCTTGATAATTGGAGGAAGGATAGTAAAAGTGATTGTGATTTGGAGGAAGAAGAAATAGAATGCAGGAATGAGAAAGTTGTTAGTTTTCGGGTTCCTAAAGCTACTAATTTGAAAAGCAAGGAACTTGATAGGAAGAGTAAGTATAGTGCATTGTGTAAAGAAGAAAGGTTTCACGAGCAACATAATGATGAGGCTCGTGCTCGTGTTGATGAGAAGCTTCCGAATAAAAAGGGTACTTTTGGGCCAGAGAACTTCTATTCAGGTGACTTGGTTTGGGCAAAGTCTGGGAGAAATGAGCCGTTTTGGCCGGCTATTGTTATCGATCCAATGACACAAGCACCCGAGCTTGTTTTGCGTTCTTGTATACCCGATGCAGCCTGTGTTGTGTTCTTTGGTCACTCTGGGAACGAGAATGAAAGGGACTATGCATGGGTGAGGAGAGGGATGATCTTCCCTTTTGTGGACTATGTTGCCAGGTTCCAGGAACAGCCTGAACTGCAAGGGTGCAAGCCTGGGAATTTTCAGATGGCATTGGAGGAAGCATTTTTGGCAGATCAGGGATTCACGGAGAAGTTGATGCATGATATTCACTTGGCTGCTGGGAACTCGACTTTTGACGATTCTTTCTACAGATGGATTCAAGAAACTGCGGTCTCAAATCAGGAGCTCAATAACAATGCTCCAAGACAGGGGCTGTTAAAGAAACACAGAAATCCACTAGCATGTGCAGGATGTGAAACAGTCATTTCTTTTGAGATGGCAAAAAAAATGAAAGATCTGATTCCTGGAGATCAATTGTTGTGTAAACCATGTTCAAGGTTAACAAAATCAAAACACATTTGTGGTATATGCAAGAAGATAAGGAATCATTTGGACAATAAAAGCTGGGTGCGCTGTGATGGTTGTAAAGTCCGGATACACGCAGAATGTGACCAAATATCAGATAGGCATTTGAAGGATTTGCGGGAAACAGATTACTACTGTCCTACTTGCAGAGCAAAATTTAACTTTGACCTATCAGATTCAGAAAAACAAAACTCAAAGTCAAAAGTTGCGAAAGGCGATGGTCAGATGGTTCTTCCTGACAAGGTTATTGTTGTATGCGCTGGAGTAGAAGGAGTTTATTTCCCGAGGCTCCATTTAGTGGTATGTAAATGTGGCTCCTGTGGACCTAAAAAGAAAGCCCTTAGCGAATGGGAAAGGCATACCGGATCAAAGTCAAAAAATTGGAAGACCAGTGTGAAAGTCAAAAGCTCGAAGCTGGCACTAGAAGATTGGATGATGAACTTAGCAGAGTTACATGCAAATGCTACTGCAGCTAAAGTTCCTAAACGACCTTCCATAAAGCAGAGAAAGCAGAGATTGCTTGCTTTTCTATCAGAGACATATGAGCCGGTCAATGCGAAGTGGACAACAGAACGATGTGCAGTTTGCAGATGGGTTGAAGATTGGGACTACAACAAGATTATTATCTGCAACAGATGCCAAATAGCAGTGCATCAGGAATGCTATGGCGCTAGACATGTTCGTGATTTCACCTCATGGGTCTGTAAAGCATGCGAGAGACCAGATATCAAGCGGGAGTGTTGCCTCTGCCCTGTAAAAGGAGGTGCATTGAAGCCAACTGATGTGGAAACGTTGTGGGTTCATGTGACATGTGCTTGGTTTCAGCCTGAAGTATGTTTTGCAAGTGAGGAAAAAATGGAACCTGCAGTTGGGATTTTGAGTATTCCATCAACTAATTTTGTGAAGATATGTGTAATATGCAAACAAATACATGGCTCGTGTACTCAGTGTTGCAAGTGTTCTACATACTATCATGCCATGTGTGCCTCCCGAGCTGGTTATAGAATGGAGTTGCACTGCTTGGAGAAAAATGGTCAGCAGATAACAAAGATGGTGTCCTATTGTGCTTATCACAGGGCTCCCAACCCAGATAACGTGTTAATTATACAAACTCCTTCAGGAGCCTTCTCTGCAAAGAGTCTTGTCCAAAACAAGAAGAAAGGTGGTTCCAGGCTTATTTCATTAATCAGAGAAGACGATGAAGCACCTGCAGAGAATACCATTACATGTGATCCATTTTCTGCTGCTCGTTGTCGAGTATTTAAAAGAAAGATCAATAGCAAGAAGAGGATTGAAGAAGAAGCCATTCCTCACCACACAAGGGGACCACGCCATCATGCATCAGCAGCAATCCAAACTTTAAACACATTCAGACATGTGCCAGAAGAACCCAAATCGTTTTCTTCTTTCAGGGAACGACTTCACCACTTGCAGAGGACAGAAATGGATCGGGTCTGCTTTGGGCGATCTGGAATTCATGGATGGGGTCTTTTTGCAAGAAGAAATATCCAAGAAGGAGAAATGGTTCTTGAATACAGAGGGGAACAGGTGAGAGGTAGCATTGCAGACTTGAGAGAAGCACGTTATCGCAGAGTAGGAAAGGATTGCTATCTTTTCAAGATCAGTGAAGAAGTAGTGGTTGATGCTACAGATAAAGGGAATATAGCTCGGCTCATCAATCATTCGTGTACACCAAACTGCTATGCGAGGATTATGAGTGTAGGAGATGAGGAAAGCAGGATTGTCCTGATAGCCAAGGCCAATGTAGCTGTGGGAGAGGAGTTAACGTATGATTACTTATTTGATCCAGACGAGGCAGAGGAACTCAAGGTGCCATGCTTATGTAAAGCCCCTAACTGCAGGAAATTCATGAATTAGAATAGAAAGGTATAGATCCTCTAAGTTTACTTCACAGGCTACAACACCAAGAAGAAAAGGCCAAAGCAAGATTGTCTCTTTTTGCTCCAAAAACAATAGATTTATAGGTAGAGAGAAAAGCTAAGTGATCCAAGTCTGATCTCTTCTGCCTCTCTGTATAGACAAACTCGTTTGTGTCACCATTATCCTCAAAAGAATTCAATTTCATTCATTTTGTTCATTTCAACGAGACTTGAGCAGAAAACTTGGGATAATTCCAACTGTTGTGACCGTTTTACCCTATAACCATCGGTTTACTACGGTTATACCGCGAAGGTGATGAGTCAATTCAATTGGGAATTGATTTTCCTTTCGCGCCGGTTTATGAATCGTGC
CDS Sequence
Protein Sequence