Information report for AT4G27520
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Classification of genes differentially expressed during water-deficit stress in Arabidopsis thaliana: an analysis using microarray and differential expression data. DOI: 10.1093/aob/mcf104 ; PMID: 12102506
- Prediction of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A genomic analysis. DOI: 10.1104/pp.010884 ; PMID: 12068095
- Using genomic resources to guide research directions. The arabinogalactan protein gene family as a test case. DOI: 10.1104/pp.003459 ; PMID: 12177459
- Arabidopsis transcriptome profiling indicates that multiple regulatory pathways are activated during cold acclimation in addition to the CBF cold response pathway. DOI: 10.1105/tpc.003483 ; PMID: 12172015
- The identification of candidate genes for a reverse genetic analysis of development and function in the Arabidopsis gynoecium. DOI: 10.1104/pp.102.017798 ; PMID: 12805595
- Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. DOI: 10.1104/pp.103.021170 ; PMID: 12805588
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Loss of TIP1;1 aquaporin in Arabidopsis leads to cell and plant death. DOI: 10.1111/j.1365-313X.2004.02265.x ; PMID: 15584951
- The cold-induced early activation of phospholipase C and D pathways determines the response of two distinct clusters of genes in Arabidopsis cell suspensions. DOI: 10.1104/pp.105.068171 ; PMID: 16258011
- A quantitative analysis of Arabidopsis plasma membrane using trypsin-catalyzed (18)O labeling. DOI: 10.1074/mcp.M500414-MCP200 ; PMID: 16635983
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Gene expression programs during shoot, root, and callus development in Arabidopsis tissue culture. DOI: 10.1104/pp.106.081240 ; PMID: 16648215
- Functional profiling reveals that only a small number of phytochrome-regulated early-response genes in Arabidopsis are necessary for optimal deetiolation. DOI: 10.1105/tpc.106.042200 ; PMID: 16891401
- An early nodulin-like protein accumulates in the sieve element plasma membrane of Arabidopsis. DOI: 10.1104/pp.106.092296 ; PMID: 17293437
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Genome-wide identification, structure and expression studies, and mutant collection of 22 early nodulin-like protein genes in Arabidopsis. DOI: 10.1271/bbb.90407 ; PMID: 19897921
- Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. DOI: 10.1104/pp.103.021170 ; PMID: 12805588
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. DOI: 10.1016/j.phytochem.2008.04.007 ; PMID: 18538804
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178V632
- EMBL: LUHQ01000004
- AlphaFoldDB: A0A178V632
- EnsemblPlants: AT4G27520.1
- Gramene: AT4G27520.1
- KEGG: ath:AT4G27520
- Orthologous matrix: ENYESWS
- ExpressionAtlas: AT4G27520
- InterPro: IPR003245, IPR008972, IPR039391
- PANTHER: PTHR33021, PTHR33021:SF449
- SUPFAM: SSF49503
- PROSITE: PS51485
- Gene3D: 2.60.40.420
- SWISS-MODEL: A0A178V632
- Conserved Domain Database: cd11019
Sequences
cDNA Sequence
- >AT4G27520.1
GTTCTCTAATGCGTTTTTCCCGGGGATAAATTCATATAACTTCAAATCCCAAAAAGAATTAAATTAAACACGTCGGCAGATACGAAGAAGCAATATCTTCTTTTAATGTGAGGAAAACGAGTAGATACAGAGATTCAATTTCGAACACGTATTACCCATAAAAACGACCTCTCTCTATCATTAAGACAAAAAAGCTTCACACTTTCCTTAGCCCATTATAAACGCTTCATTTCTATATAAACATCTCTTATCTTGTTGAAAATCTCTCGCAGCTTTTGAAAAACATGACCTTTCTAAAAATGAAAAGCCTTTCTTTCTTCTTCACCATCCTCCTCTCTCTCTCGACCCTCTTCACCATCTCCAACGCACGGAAGTTTAATGTCGGAGGCAGTGGCGCGTGGGTTACAAACCCACCTGAAAACTACGAATCTTGGTCTGGCAAAAACCGTTTCCTTGTTCACGACACTCTCTATTTTAGCTACGCTAAGGGAGCTGACTCGGTGCTAGAGGTGAACAAGGCTGATTACGACGCTTGTAATACAAAGAATCCGATCAAAAGAGTGGACGATGGAGATTCTGAGATCTCTCTTGATCGTTATGGTCCGTTTTACTTCATCAGTGGCAATGAAGATAACTGTAAGAAGGGTCAAAAGCTTAATGTCGTTGTCATATCTGCTAGGATTCCATCAACGGCTCAGTCTCCTCACGCCGCTGCACCGGGAAGCTCTACGCCGGGATCAATGACTCCGCCGGGAGGAGCCCACTCGCCTAAATCTTCCTCCCCTGTTTCTCCGACGACTTCTCCTCCGGGATCGACTACTCCGCCTGGAGGAGCTCACTCGCCTAAATCTTCATCAGCTGTCTCTCCGGCGACTTCTCCTCCAGGATCAATGGCGCCTAAATCCGGCTCCCCTGTTTCTCCGACGACTTCACCACCGGCACCACCTAAATCCACGTCCCCTGTTTCCCCATCCTCTGCTCCGATGACTTCACCGCCGGCACCAATGGCACCTAAATCATCTTCAACTATTCCTCCGTCTTCTGCTCCGATGACTTCACCACCTGGATCAATGGCACCTAAATCTTCATCCCCTGTTTCAAACTCACCCACCGTTTCTCCATCGTTGGCTCCGGGAGGCTCTACTTCTTCTTCACCGTCAGATTCTCCGTCAGGCTCGGCGATGGGTCCTTCAGGAGATGGTCCATCAGCCGCTGGTGATATCTCTACGCCGGCTGGAGCTCCAGGGCAGAAAAAATCGTCGGCGAATGGTATGACCGTTATGTCGATTACTACGGTTTTAAGTTTGGTTTTGACCATCTTTCTGTCAGCTTAAGAACACTTGTGAGACTTGTTTCATGTCGGATTCGATTTGTTCTTGTTTCGGTTGAGTTTCCAACTTTGTTTTAAATTGTTTTTGGATCCCAGTTTGATTCTGTATTATTCAGTATAGTTGGATTGTTTTGTTATAAATAATAGACAGTTCTAAACATGATAACTCCACTTATACCAACATTATGTGATACATCATACTTATATATTAATTACATTTACATGTGAATGCATAAGGTTAGTGTTGAAACTCAATGTCGCATCTCAAACTCAAACGCAATGAGGTCGTTTAATCTGTTCTCCAAGAATATTTTGAAGTAGAGAGTTTGTAATACTAGGACCTAACCAACAAAGTAGTAGTAAAGTTTAATGCTGTTTAGTTCGTTCAATAATTTAGAGTTGCATGGATAATGGATTGATACAAAGTTGGGTCGTACGAAGCTTGCATTTACATATATAGTTCAATGCTTTTACAATCACATTTGGCTAATGCAAGAAAGTTACTTTTCAATTAAT
CDS Sequence
Protein Sequence