Information report for AT4G27320
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0002238 — acts upstream of or within — response to molecule of fungal origin
- GO:0005634 — located in — nucleus
- GO:0003674 — enables — molecular_function
- GO:0005829 — located in — cytosol
Functional Keywords
Literature and News
- Arabidopsis proteins containing similarity to the universal stress protein domain of bacteria. DOI: 10.1104/pp.102.016006 ; PMID: 12644671
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- An Arabidopsis protein phosphorylated in response to microbial elicitation, AtPHOS32, is a substrate of MAP kinases 3 and 6. DOI: 10.1074/jbc.M800735200 ; PMID: 18285339
- Enrichment of phosphoproteins and phosphopeptide derivatization identify universal stress proteins in elicitor-treated Arabidopsis. DOI: 10.1094/MPMI-21-10-1275 ; PMID: 18785823
- Overexpression of the NMig1 Gene Encoding a NudC Domain Protein Enhances Root Growth and Abiotic Stress Tolerance in Arabidopsis thaliana. DOI: 10.3389/fpls.2020.00815 ; PMID: 32595686
- Enrichment of phosphoproteins and phosphopeptide derivatization identify universal stress proteins in elicitor-treated Arabidopsis. DOI: 10.1094/MPMI-21-10-1275 ; PMID: 18785823
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A5S9XWB6
- EMBL: CACRSJ010000109, CACSHJ010000095
- AlphaFoldDB: A0A5S9XWB6
- EnsemblPlants: AT4G27320.2
- Gramene: AT4G27320.2
- Orthologous matrix: QLPHIRI
- ExpressionAtlas: AT4G27320
- InterPro: IPR006015, IPR006016, IPR014729
- PANTHER: PTHR31966, PTHR31966:SF19
- SUPFAM: SSF52402
- Gene3D: 3.40.50.620
- OrthoDB: A0A5S9XWB6
- SWISS-MODEL: A0A5S9XWB6
- Conserved Domain Database: cd23659
Sequences
cDNA Sequence
- >AT4G27320.2
CAGCTGCTCAGCACGTTCTCGTAATTTTCAACTTCTTGACAATTTAATACATCCATTATCCAAACAATTAGCAATTAATTACACTTATAAATTAATTTGTAAACTAATTAAAACTGACAAACACGGCTCTCTCTTCTTCATCATCATCATCATCTTCCTCTCGATCGGAAAATAGTCAAAAGTTTCTATAAATTGTTGAATCAAAGCAGAGAAGAAGAAGAAGACGATCATGAATCCAGATTCCGATTATCCTCATCTCCCTAACATCAAGATCCACCATCCTTCATCTCCTCGTCACTCTCACCACCACTCTTCCTCCACTCCTTCCGCCGCTACTCCTACCCCAACCGCCGGTGCTCGCCGTAAGATCGGAGTCGCCGTTGACCTTTCCGAAGAAAGCGCTTTCGCTGTTCGCTGGGCTGTCGATCATTACATCCGTCCCGGAGACGCCGTCGTCATTCTCCACGTTTCTCCAACCTCCGTTCTCTTCGGCGCCGATTGGGGACCTCTCCCTCTCCAAACTCCTCCTCCTCCTTCCGCCGCTACCGATCCCGGAGCTCAGCCGAAGCCTAGTCAGGAAGATTTCGATGCGTTTACTTCTTCCAAAGTAGCGGATCTAGCGAAGCCGTTGAAGGAAGCTGGGTTTCCTCATAAGATCCATATAGTGAAAGATCACGATATGAGAGAGAGGCTTTGCTTAGAGACTGAAAGGCTTAATCTAAGCGCCGTGATAATGGGAAGCAGAGGATTTGGTGCTGAGAAGAGAGGAAGTGATGGCAAGCTTGGCTCTGTTAGTGATTATTGTGTTCACCATTGTGTTTGTCCTGTTGTTGTTGTTAGATATCCTGATGATCGTGATGGTCCTGCTCCTCCTGGGAATGTTGGAGCTACCAGGGAAGCTATTGTCACTGTTAAATCACGTAGGGATGATGACGATGATGATGATGAAGATCATGAGGCTAAGATTGCTGCTGCTGCTTCCGATCATCATGAACACATCAAAGGTTAGGATCCATTCATTACTTTCTCTCGTTGACTTGCTATATAAGGTTGGTGGTGGTGGCATAAGTTTTTGGAATTGTTCTGAATACCTTAGCTTTGTGTTTTCTAGAGATTGCCAATGATGGAAACTTGTAAAACTTAGATCTTTCTATGATTCGTCTTCAGAAATTAGAGTATTGTGACTTTTAATTTGCTCGACTCTGTTTCACCTTGTAGGAGTGGTTTTACGAATGAGCCGGTTACTTAACTTTCTGCTTTAGTATCGAAAAGTATTTGATTTTTCCATATTTTTTTTGTGTCTGTTGCTTTGTTGAGTGTATGTTAAATTTCGTAGCCATTTTTGATGACTATCTAGAAGTTTTTGGAAATTTTCACTGCAATGCAAGAGCAAGTATGGAAATGAACTTCAACGTTTTCTCACTTCATGATTTTCCTACACTGCTTTTGCTCTTCTTTACTAAAACTGGTTGTGTTTCAATTCGAATATTCTTGATACCTCTCAGTCTAGAAGAAAATTGCGTTTGGCCCCCACCAAGAAAGGTTTTTTTTTTTGGGTGATCTCTTGACTCTTTTCTATATTTGATCTGGTTTGGAGTAATAGTAAGCAAAGTTTCACAATTCTTGACTTGATAAAGAAGAGAAGAGACAAATCTCCTGTGCTTCCTGGCGAAACTCCTTTTCAGTAAATTAGAGAAAATATCTGGTTGGTGGCATTTTGTAAAACTTGACTAGGGAAAAACTTGAGAATAGAGTGATATAGAAATCATAAGCACTTCTCTTTGTTTGATCTAGCTAGTCTATTGCTAAGACAGCCTTTGTTATACACTTTTCTAGACATATGATAACTGTGCGTAAGATGATGCAAAATAGCTATGAATTGTCAAAGCCTAGGTTTGCAAAAGAAAATGTACATGATCTTTTCTTGATTGACTCCTCTTGTGAATCTTAGTTTCAACTCTTACAAGTTGACACTTGTAGAAGGATATTTGACATCAAGCTAATTAATTAAAACAAGGTTGTCTGGGTATGATTTTATTATCCAAAGCGAATAACTATTGAGCCCTCTTCCTTTTACAGATGAGTAAAGTGCCTTAGTATCTCATCAGGTTCACCCTCTTCACAGTCAGGTACAACGATGGATGAAACAAAACGGATTTGTGCAGAGGAGTGTGTTTGTGTGTTTGTTTATTGCTATCTTTTGCAATATTGAAAAGTCTCTGGAATCTCCTCTGGATTATTTATTCCCAGTCCTTGTTCTTCTTATAATTCTCCATGTATGATTTTCACATTTAAACAATGCCCTTTTCCATGTATGACTTTCACATTTAAACAATACCCTTTTGGGGTTATGACCTTAATCTTCAATCTAATTTGATATCCGATGAGATACTAAAAGATGGAATCTATTTTGGTTTTTAACACTTAAAACAAATCGACCAAAG - >AT4G27320.1
CAGCTGCTCAGCACGTTCTCGTAATTTTCAACTTCTTGACAATTTAATACATCCATTATCCAAACAATTAGCAATTAATTACACTTATAAATTAATTTGTAAACTAATTAAAACTGACAAACACGGCTCTCTCTTCTTCATCATCATCATCATCTTCCTCTCGATCGGAAAATAGTCAAAAGTTTCTATAAATTGTTGAATCAAAGCAGAGAAGAAGAAGAAGACGATCATGAATCCAGATTCCGATTATCCTCATCTCCCTAACATCAAGATCCACCATCCTTCATCTCCTCGTCACTCTCACCACCACTCTTCCTCCACTCCTTCCGCCGCTACTCCTACCCCAACCGCCGGTGCTCGCCGTAAGATCGGAGTCGCCGTTGACCTTTCCGAAGAAAGCGCTTTCGCTGTTCGCTGGGCTGTCGATCATTACATCCGTCCCGGAGACGCCGTCGTCATTCTCCACGTTTCTCCAACCTCCGTTCTCTTCGGCGCCGATTGGGGACCTCTCCCTCTCCAAACTCCTCCTCCTCCTTCCGCCGCTACCGATCCCGGAGCTCAGCCGAAGCCTAGTCAGGAAGATTTCGATGCGTTTACTTCTTCCAAAGTAGCGGATCTAGCGAAGCCGTTGAAGGAAGCTGGGTTTCCTCATAAGATCCATATAGTGAAAGATCACGATATGAGAGAGAGGCTTTGCTTAGAGACTGAAAGGCTTAATCTAAGCGCCGTGATAATGGGAAGCAGAGGATTTGGTGCTGAGAAGAGAGGAAGTGATGGCAAGCTTGGCTCTGTTAGTGATTATTGTGTTCACCATTGTGTTTGTCCTGTTGTTGTTGTTAGATATCCTGATGATCGTGATGGTCCTGCTCCTCCTGGGAATGTTGGAGCTACCAGGGAAGCTATTGTCACTGTTAAATCACGTAGGGATGATGACGATGATGATGATGAAGATCATGAGGCTAAGATTGCTGCTGCTGCTTCCGATCATCATGAACACATCAAAGGTTAGGATCCATTCATTACTTTCTCTCGTTGACTTGCTATATAAGGTTGGTGGTGGTGGCATAAGTTTTTGGAATTGTTCTGAATACCTTAGCTTTGTGTTTTCTAGAGATTGCCAATGATGGAAACTTGTAAAACTTAGATCTTTCTATGATTCGTCTTCAGAAATTAGAGTATTGTGACTTTTAATTTGCTCGACTCTGTTTCACCTTGTAGGAGTGGTTTTACGAATGAGCCGGTTACTTAACTTTCTGCTTTAGTATCGAAAAGTATTTGATTTTTCCATATTTTTTTTGTGTCTGTTGCTTTGTTGAGTGTATGTTAAATTTCGTAGCCATTTTTGATGACTATCTAGAAGTTTTTGGAAATTTTCACTGCAATGCAAGAGCAAGTATGGAAATGAACTTCAACGTTTTCTCACTTCATGATTTTCCTACACTGCTTTTGCTCTTCTTTACTAAAACTGGTTGTGTTTCAATTCGAATATTCTTGATACCTCTCAGTCTAGAAGAAAATTGCGTTTGGCCCCCACCAAGAAAGGTTTTTTTTTTTGGGTGATCTCTTGACTCTTTTCTATATTTGATCTGGTTTGGAGTAATAGTAAGCAAAGTTTCACAATTCTTGACTTGATAAAGAAGAGAAGAGACAAATCTCCTGTGCTTCCTGGCGAAACTCCTTTTCAGTAAATTAGAGAAAATATCTGGTTGGTGGCATTTTGTAAAACTTGACTAGGGAAAAACTTGAGAATAGAGTGATATAGAAATCATAAGCACTTCTCTTTGTTTGATCTAGCTAGTCTATTGCTAAGACAGCCTTTGTTATACACTTTTCTAGACATATGATAACTGTGCGTAAGATGATGCAAAATAGCTATGAATTGTCAAAGCCTAGGTTTGCAAAAGAAAATGTACATGATCTTTTCTTGATTGACTCCTCTTGTGAATCTTAGTTTCAACTCTTACAAGTTGACACTTGTAGAAGGATATTTGACATCAAGCTAATTAATTAAAACAAGGTTGTCTGGGTATGATTTTATTATCCAAAGCGAATAACTATTGAGCCCTCTTCCTTTTACAGATGAGTAAAGTGCCTTAGTATCTCATCAGGTTCACCCTCTTCACAGTCAGGTACAACGATGGATGAAACAAAACGGATTTGTGCAGAGGAGTGTGTTTGTGTGTTTGTTTATTGCTATCTTTTGCAATATTGAAAAGTCTCTGGAATCTCCTCTGGATTATTTATTCCCAGTCCTTGTTCTTCTTATAATTCTCCATGTATGATTTTCACATTTAAACAATGCCCTTTTCCATGTATGACTTTCACATTTAAACAATACCCTTTTGGGGTTATGACCTTAATCTTCAATCTAATTTGATATCCGATGAGATACTAAAAGATGGAATCTATTTTGGTTTTTAACACTTAAAACAAATCGACCAAAG
CDS Sequence
Protein Sequence