Gene Details:

• Gene ID: AT4G27260
• Gene Symbol: GH3.5, WES1
• Gene Name:
• Description: Auxin-responsive GH3 family protein;(source:Araport11)
• TAIR Accession: locus:2131739
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT4G27260.1

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020038  — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0020137  — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
• PO:0020003  — plant ovule — óvulo vegetal (Spanish, exact), 胚珠 (Japanese, exact), Poaceae ovule (narrow), Zea ovule (narrow)

Gene Ontology:

• GO:1901183  — acts upstream of or within — positive regulation of camalexin biosynthetic process
• GO:0010120  — acts upstream of or within — camalexin biosynthetic process
• GO:0010279  — enables — indole-3-acetic acid amido synthetase activity
• GO:0009733  — acts upstream of or within — response to auxin
• GO:0005737  — is active in — cytoplasm
• GO:0005634  — located in — nucleus

Function-related keywords:

• shoot axis apex ,  shoot system ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  inflorescence flower pedicel ,  cotyledon ,  petiole ,  hypocotyl ,  leaf apex ,  collective leaf structure ,  pollen ,  plant ovule

Literature:

• Arabidopsis contains a large superfamily of acyl-activating enzymes. Phylogenetic and biochemical analysis reveals a new class of acyl-coenzyme a synthetases.   DOI:  10.1104/pp.103.020552 ;  PMID:  12805634
• Viviparous1 alters global gene expression patterns through regulation of abscisic acid signaling.   DOI:  10.1104/pp.103.022475 ;  PMID:  12857845
• DFL2, a new member of the Arabidopsis GH3 gene family, is involved in red light-specific hypocotyl elongation.   DOI:  10.1093/pcp/pcg130 ;  PMID:  14581632
• The auxin-induced transcriptome for etiolated Arabidopsis seedlings using a structure/function approach.   DOI:  10.1007/s10142-003-0093-7 ;  PMID:  14648238
• Development and evaluation of an Arabidopsis whole genome Affymetrix probe array.   DOI:  10.1111/j.1365-313X.2004.02061.x ;  PMID:  15086809
• The Arabidopsis transcription factor HY5 integrates light and hormone signaling pathways.   DOI:  10.1111/j.1365-313X.2004.02052.x ;  PMID:  15078335
• Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis.   DOI:  10.1104/pp.103.034736 ;  PMID:  15047898
• The response regulator 2 mediates ethylene signalling and hormone signal integration in Arabidopsis.   DOI:  10.1038/sj.emboj.7600337 ;  PMID:  15282545
• Versatile gene-specific sequence tags for Arabidopsis functional genomics: transcript profiling and reverse genetics applications.   DOI:  10.1101/gr.2544504 ;  PMID:  15489341
• Characterization of an Arabidopsis enzyme family that conjugates amino acids to indole-3-acetic acid.   DOI:  10.1105/tpc.104.026690 ;  PMID:  15659623
• Transcript profiling in Arabidopsis reveals complex responses to global inhibition of DNA methylation and histone deacetylation.   DOI:  10.1074/jbc.M409053200 ;  PMID:  15516340
• Auxin and light control of adventitious rooting in Arabidopsis require ARGONAUTE1.   DOI:  10.1105/tpc.105.031625 ;  PMID:  15829601
• Cell cycle progression in the pericycle is not sufficient for SOLITARY ROOT/IAA14-mediated lateral root initiation in Arabidopsis thaliana.   DOI:  10.1105/tpc.105.035493 ;  PMID:  16243906
• Proteomic analysis of different mutant genotypes of Arabidopsis led to the identification of 11 proteins correlating with adventitious root development.   DOI:  10.1104/pp.105.067868 ;  PMID:  16377752
• A gradient of auxin and auxin-dependent transcription precedes tropic growth responses.   DOI:  10.1073/pnas.0507127103 ;  PMID:  16371470
• Transcriptome analysis of Arabidopsis clubroots indicate a key role for cytokinins in disease development.   DOI:  10.1094/MPMI-19-0480 ;  PMID:  16673935
• Upregulation of an Arabidopsis RING-H2 gene, XERICO, confers drought tolerance through increased abscisic acid biosynthesis.   DOI:  10.1111/j.1365-313X.2006.02782.x ;  PMID:  16792696
• Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses.   DOI:  10.1016/j.cell.2006.05.050 ;  PMID:  16901781
• The GH3 acyl adenylase family member PBS3 regulates salicylic acid-dependent defense responses in Arabidopsis.   DOI:  10.1104/pp.107.097691 ;  PMID:  17468220
• Multilevel interactions between ethylene and auxin in Arabidopsis roots.   DOI:  10.1105/tpc.107.052068 ;  PMID:  17630276
• Genome-wide analysis of Arabidopsis responsive transcriptome to nitrogen limitation and its regulation by the ubiquitin ligase gene NLA.   DOI:  10.1007/s11103-007-9241-0 ;  PMID:  17885809
• A highly efficient miPCR method for isolating FSTs from transgenic Arabidopsis thaliana plants.   DOI:  10.1007/s12041-008-0020-8 ;  PMID:  18776641
• Identification, cloning and characterization of sis7 and sis10 sugar-insensitive mutants of Arabidopsis.   DOI:  10.1186/1471-2229-8-104 ;  PMID:  18854047
• Expression-based discovery of candidate ovule development regulators through transcriptional profiling of ovule mutants.   DOI:  10.1186/1471-2229-9-29 ;  PMID:  19291320
• Arabidopsis GH3.5 regulates salicylic acid-dependent and both NPR1-dependent and independent defense responses.   DOI:  10.4161/psb.3.8.5748 ;  PMID:  19513247
• The conjugated auxin indole-3-acetic acid-aspartic acid promotes plant disease development.   DOI:  10.1105/tpc.111.095190 ;  PMID:  22374398
• Arabidopsis acetyl-amido synthetase GH3.5 involvement in camalexin biosynthesis through conjugation of indole-3-carboxylic acid and cysteine and upregulation of camalexin biosynthesis genes.   DOI:  10.1111/j.1744-7909.2012.01131.x ;  PMID:  22624950
• Auxin controls Arabidopsis adventitious root initiation by regulating jasmonic acid homeostasis.   DOI:  10.1105/tpc.112.099119 ;  PMID:  22730403
• A survey of dominant mutations in Arabidopsis thaliana.   DOI:  10.1016/j.tplants.2012.08.006 ;  PMID:  22995285
• and PIF4-controlled plant growth: a coincidence mechanism directly integrates a hormone signaling network into the photoperiodic control of plant architectures in Arabidopsis thaliana.   DOI:  10.1093/pcp/pcs137 ;  PMID:  23037003
• SENESCENCE-SUPPRESSED PROTEIN PHOSPHATASE Directly Interacts with the Cytoplasmic Domain of SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE and Negatively Regulates Leaf Senescence in Arabidopsis.   DOI:  10.1104/pp.15.01112 ;  PMID:  26304848
• Endogenous Arabidopsis messenger RNAs transported to distant tissues.   DOI:  10.1038/nplants.2015.25 ;  PMID:  27247031
• Cytokinin-Dependent Control of GH3 Group II Family Genes in the Arabidopsis Root.   DOI:  10.3390/plants8040094 ;  PMID:  30965632
• Salicylic Acid Affects Root Meristem Patterning via Auxin Distribution in a Concentration-Dependent Manner.   DOI:  10.1104/pp.19.00130 ;  PMID:  31036755
• Cold stress activates disease resistance in Arabidopsis thaliana through a salicylic acid dependent pathway.   DOI:  10.1111/pce.13579 ;  PMID:  31087367
• Inactivation of the entire Arabidopsis group II GH3s confers tolerance to salinity and water deficit.   DOI:  10.1111/nph.18114 ;  PMID:  35322877
• MicroRNA-directed regulation of Arabidopsis AUXIN RESPONSE FACTOR17 is essential for proper development and modulates expression of early auxin response genes.   DOI:  10.1105/tpc.105.031716 ;  PMID:  15829600
• Proteomic analysis of different mutant genotypes of Arabidopsis led to the identification of 11 proteins correlating with adventitious root development.   DOI:  10.1104/pp.105.067868 ;  PMID:  16377752
• Gene expression profiling of the different stages of Arabidopsis thaliana trichome development on the single cell level.   DOI:  10.1016/j.plaphy.2007.11.001 ;  PMID:  18160300

Sequences: