Information report for AT4G27110
Gene Details
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Functional Descriptions
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0031982 — located in — vesicle
- GO:0016324 — located in — apical plasma membrane
- GO:0071555 — involved in — cell wall organization
- GO:0010183 — involved in — pollen tube guidance
- GO:0009860 — involved in — pollen tube growth
- GO:0016020 — located in — membrane
- GO:0010215 — involved in — cellulose microfibril organization
- GO:0005886 — located in — plasma membrane
Functional Keywords
Literature and News
- Prediction of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A genomic analysis. DOI: 10.1104/pp.010884 ; PMID: 12068095
- The COBRA family of putative GPI-anchored proteins in Arabidopsis. A new fellowship in expansion. DOI: 10.1104/pp.007468 ; PMID: 12376623
- The Arabidopsis CDPK-SnRK superfamily of protein kinases. DOI: 10.1104/pp.102.011999 ; PMID: 12805596
- Comparative analysis of the Arabidopsis pollen transcriptome. DOI: 10.1104/pp.103.020925 ; PMID: 12805594
- Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. DOI: 10.1104/pp.103.021170 ; PMID: 12805588
- Transcriptional profiling of Arabidopsis tissues reveals the unique characteristics of the pollen transcriptome. DOI: 10.1104/pp.103.028241 ; PMID: 14500793
- SETH1 and SETH2, two components of the glycosylphosphatidylinositol anchor biosynthetic pathway, are required for pollen germination and tube growth in Arabidopsis. DOI: 10.1105/tpc.014407 ; PMID: 14671020
- The pleiotropic Arabidopsis frd mutation with altered coordination of chloroplast biogenesis, cell size and differentiation, organ size and number. DOI: 10.1016/j.gene.2006.06.019 ; PMID: 16973304
- The tify family previously known as ZIM. DOI: 10.1016/j.tplants.2007.04.004 ; PMID: 17499004
- A new picture of cell wall protein dynamics in elongating cells of Arabidopsis thaliana: confirmed actors and newcomers. DOI: 10.1186/1471-2229-8-94 ; PMID: 18796151
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Identification of two highly specific pollen promoters using transcriptomic data. DOI: 10.1016/j.plaphy.2014.08.010 ; PMID: 25208507
- Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. DOI: 10.1104/pp.103.021170 ; PMID: 12805588
Gene Resources
- UniProt: A0A178V4R6
- EMBL: CACSHJ010000095, LUHQ01000004
- AlphaFoldDB: A0A178V4R6
- EnsemblPlants: AT4G27110.1
- Gramene: AT4G27110.1
- KEGG: ath:AT4G27110
- Orthologous matrix: HHREIIV
- ExpressionAtlas: AT4G27110
- InterPro: IPR006918
- PANTHER: PTHR31052, PTHR31052:SF14
- OrthoDB: A0A178V4R6
Sequences
cDNA Sequence
- >AT4G27110.1
ACCATCTCTCTTTTCTCTGTTTTCTCTTTCTTGCGTTCCTAAGAAACTTGGGAAACACGATAGAGATGAAGAAGCTCCGTTACGTCCATTTAAACCTCCTTCTCCTTCTATTACCTCTAATCAATCTTCAGTTTCCGACATTATCATTGGCTCAAGACTACGATGAACCAAAGAAGGATGATACTCCACCGCCAGGTCTGGCCCGTTGCAACGGAGTTTACATGTCTTACAGTTCCGGTGGCCGAGAAAAGTTGTATCCTCGCACCACAAACGCGACTGCTCAAGCTTGGTCTTTTAAATCAACGGCCATGATCGTGAACACTGGTATCGAAGAGGTCAAAGGTTGGCAAATGTTCGTAGGGTTTCATCACAGAGAGATCATCGTTTCCGCGACTGGAGCTGTCTCATCTGACGGTGACTTCCCGGTCGATGCAACCAACGGTACTACGTTTATCGGGTCTCAGAATACGGACCTAAAGACCTCGATCCTGACAGCTGGCGATTACACTCAGATCTCGACCAATATCGAGATAACCGGAACGGTTTTTGGCGGGAAAGGTACAGCTACGCCGATGCCGAAATCGATCAAGCTCACAAACGATGGATGGCAATGCCCTGCTGCTACTTCTAAAGGCGGTACAATGCAAGTTTGCTGCAAGAGGAACCCAAAGTTTAAAGCTAAAGAAAAGGTGAAAACCAAGTTCATGCCTAGACAACACGGTGACCTGAACATAATCTACGACGTTCTTCAAGCCTATGCAAGCAGCTACATGGCGCAGGTGACTATAGATAACACTAGCCCGCTGGGACGGTTAGACCATTGGAACTTGACATGGGAGTGGATGCGAGGAGAGTTCATCCACTCGATGCGTGGAGCCTACGCGGCCGAGAAGAACACGTTGGAATGCTTAAGCAGCAAGGCGGGACAGTTCTACGGGGATCTTGATTTCTCTCAGGTTGCTAATTGCCAGAAGAAACCAATAATCAAAGATTTACCAGCTGAGCGTAAAGACGATAATGTCACCGGTAAATTGCCTTTCTGCTGCAAGAATGGCACTCTTTTGCCCACTCACATGGATCCTTCTAAATCCAAAGCCATTTTCCAGTTACAGGTTTACAAGGTACCACCTGATCAGAACAGAACAGCATTCTTTCCTCCTCGAAACTGGAAGATTGATGGTATAGTGAATCCGACGTACAAATGCGGACCACCTATTCGGGTGGACGCGACCCCGTTCCCTGACCCTAGCGGTCTCCAAGCCACAACCTACGCTATCGCCAGCTGGCAAGTCATCTGCAATATAACCAAGCCTAAACCACAAGCTGCACGTTGCTGCGTCTCCTTCTCAGCCTTTTACAACGACTCGGCCATTCCTTGTAACACCTGCGCTTGCGGCTGCAAAGATATCGATACCGACACTTGCAACGCCAATGCCCGACAGCTTCTCCTCCCTACTGACACACTCTTGGTACCGTTTGATAACCGAACGCTCAAGGCAAAGGTATGGGCAAAGCAGAAGCACATGGCTTATCCAAAGAAACTTCCTTGTCCTGACAACTGCGGAATCAGCTTAAACTGGCATCTTAACTCGGATTACGGTAATGGGTGGTCCGCAAGAGTAACTTTGTTTAACTGGGGAAATAATGCAGTGGAGGATTGGTTTGGGGCTTTGGATTTAGGCAAAGCTGGTTTAGGATATGAGAATATTTACTCCTTTAATGGATCAAGAGTTCCACCTAAGAACCAGACCATTTTCTTCCAAGGACTTCCTGGTATGAACTACTTGATTGGTATCACAAACGGAACGAATCCTGCGAGAGACCCGCAGATTCCCGGGAAAATGCAGTCGGTTATCTCGTTTAAGAAGAAGAATTTGGGGAGTTTGAATATCATAGGAGGAGATGGATTTCCTAAGAGAGTTTTCTTCAATGGAGAAGAATGTGAGCTTCCTAAGTATTTCCCTAAAAAGAGTTCCGGGATGAGATTATCCGGTATCCGATTCTTGCCTTCGATTCTTCTCGCGATCACAACATTTCATGCGATCACTGATCGCTTACTAACTGGTGTGTAGATGCTTTAGTTAATTATGTAAATTGATTTCTGTTTAGCCATGTCATGCTCAAGAAACTTGAAGAGAACGTTTTGTATATGTATCTCTCTATTCACAGTTTTGGTTGATCCAAGAAACTTGTATCCATAATCGGAAAGGAACTAAAGCAGATTGATTCTCACTCATTAGTTATTATTACACTCTTGGCCTCTT
CDS Sequence
Protein Sequence