Information report for AT4G27090
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0009506 — located in — plasmodesma
- GO:0000325 — located in — plant-type vacuole
- GO:0003729 — enables — mRNA binding
- GO:0005783 — located in — endoplasmic reticulum
- GO:0003735 — enables — structural constituent of ribosome
- GO:0005829 — located in — cytosol
- GO:0022626 — located in — cytosolic ribosome
- GO:0022625 — part of — cytosolic large ribosomal subunit
- GO:0003723 — enables — RNA binding
- GO:0005730 — located in — nucleolus
- GO:0022625 — located in — cytosolic large ribosomal subunit
- GO:0042273 — involved in — ribosomal large subunit biogenesis
- GO:0006412 — involved in — translation
- GO:0005773 — located in — vacuole
- GO:0005737 — located in — cytoplasm
- rpl14b-1 — Abnormal ovule and pollen, homozygous lethal. Pollen tube guidance is affected in abnormal ovules resulting in poor fertilization.
Functional Keywords
Literature and News
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- Transcriptional profiling of Arabidopsis tissues reveals the unique characteristics of the pollen transcriptome. DOI: 10.1104/pp.103.028241 ; PMID: 14500793
- Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. DOI: 10.1093/pcp/pch099 ; PMID: 15215502
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- The EAR-motif of the Cys2/His2-type zinc finger protein Zat7 plays a key role in the defense response of Arabidopsis to salinity stress. DOI: 10.1074/jbc.M611093200 ; PMID: 17259181
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Mechanical stress induces biotic and abiotic stress responses via a novel cis-element. DOI: 10.1371/journal.pgen.0030172 ; PMID: 17953483
- Differential phosphorylation of ribosomal proteins in Arabidopsis thaliana plants during day and night. DOI: 10.1371/journal.pone.0029307 ; PMID: 22195043
- A proteomics approach identifies novel proteins involved in gravitropic signal transduction. DOI: 10.3732/ajb.1200339 ; PMID: 23281391
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. DOI: 10.1093/pcp/pch099 ; PMID: 15215502
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. DOI: 10.1104/pp.104.053637 ; PMID: 15734919
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Mapping the Arabidopsis organelle proteome. DOI: 10.1073/pnas.0506958103 ; PMID: 16618929
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
Gene Resources
- UniProt: B9DHP0
- EMBL: AK317593, AK317595
- AlphaFoldDB: B9DHP0
- EnsemblPlants: AT4G27090.1
- Gramene: AT4G27090.1
- KEGG: ath:AT4G27090
- Orthologous matrix: KLCFVVD
- ExpressionAtlas: AT4G27090
- InterPro: IPR002784, IPR008991, IPR014722
- PANTHER: PTHR11127, PTHR11127:SF2
- SUPFAM: SSF50104
- Gene3D: 2.30.30.30, 6.10.250.2270
- OrthoDB: B9DHP0
- SWISS-MODEL: B9DHP0
- Conserved Domain Database: cd23702
Sequences
cDNA Sequence
- >AT4G27090.1
CCTCTGCTGTCGCTCGTCTACATTTACACTCGGAGCTTAGACCTTCCAATCTACCGGCGGCGAAAATGGGTTTCAAGAGGTACGTTGAGATCGGGAGAGTAGCACTTGTGAACTACGGAGAAGATCATGGAAAGCTCGTCGTTATCGTCGACGTTGTTGACCAGAACAGAGCTTTGGTGGATGCCCCTGATATGGAGAGGATCCAGATGAACTTCAAGAGGTTGTCTCTTACCGATATTGTCATTGACATCAACCGTGTGCCAAAGAAGAAGGCTTTGATCGAGGCAATGGAAAAGGCTGATGTGAAGAACAAGTGGGAGAAAAGCTCATGGGGTAGGAAGCTTATCGTGCAGAAACGTAGGGCTAACCTTAACGACTTTGATAGGTTCAAGATCATGTTGGCCAAGATCAAGAAAGCTGGTGTTGTCAGGCAAGAGCTTGCAAAACTCAAGAAGGAGATCACTGCCTGATCAAATATTATCTACAATTCTGTTGTCTTTCTTTTTTGATTTTGGATTCGGAAATTAGTGTTTTTGGAACTATCAATATCAGTATGTGCTCAATTATCAGACATTATTCAAGTTTGAAACCTTGTTTGCAAAACTCAAAGTTTTTTGTTCTTTTGATCTTAGTCTTATTTTCGTTTATATGGTTCTATGTTATGATTCTATACCAAGGCTAAAGTTGAATCATGCTAAGCTAACTAAACTAATAATTAGCTTGAAGAGAA
CDS Sequence
Protein Sequence