Gene Details:
- Gene ID: AT4G27000
- Gene Symbol: ATRBP45C
- Gene Name:
- Description: RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Function-related keywords:
- vascular leaf , flower , stem , shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , guard cell
Literature:
- RBP45 and RBP47, two oligouridylate-specific hnRNP-like proteins interacting with poly(A)+ RNA in nuclei of plant cells. DOI: 10.1017/s1355838200001163 ; PMID: 11105760
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Phylogenetic and expression analysis of RNA-binding proteins with triple RNA recognition motifs in plants. DOI: 10.1007/s10059-011-0001-2 ; PMID: 21120628
- Protein and metabolite composition of Arabidopsis stress granules. DOI: 10.1111/nph.15690 ; PMID: 30664249
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- The U1 snRNP component RBP45d regulates temperature-responsive flowering in Arabidopsis. DOI: 10.1093/plcell/koab273 ; PMID: 34791475
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Sequences:
cDNA Sequence
- >AT4G27000.1
ATATTGGGCCATATTAGAACCAACTTTTGACTATAAAAAAGAAACAGCGACAGCGAATCTTTCTCTCTCTCTCTCTTTTGCCCTTACGTCCTCGAGCTCAACCCTTTAATTGCATCTACGACAGTCGTACCTTTTGCTAGGTTATCGTCGTCATGATGCAGCAGCCACCTCCAGCTTCCAACGGTGCTGCAACAGGGCCAGGGCAGATTCCTTCCGACCAACAAGCTTACCTCCAGCAGCAGCAGTCGTGGATGATGCAGCACCAGCAGCAACAACAAGGTCAGCCGCCTGCAGGATGGAATCAGCAGTCTGCACCGTCTTCTGGTCAACCACAGCAGCAGCAGTATGGTGGTGGTGGATCTCAGAATCCAGGATCAGCTGGTGAGATCCGGTCCCTGTGGATCGGTGACTTGCAGCCATGGATGGATGAGAACTATCTCATGAACGTCTTTGGTCTTACTGGCGAGGCTACAGCAGCTAAAGTTATTCGCAATAAACAGAACGGATATTCAGAAGGTTATGGCTTTATTGAGTTTGTGAACCATGCTACAGCTGAGAGGAATTTACAGACTTACAATGGTGCTCCGATGCCGAGCAGTGAGCAGGCCTTCAGGTTGAACTGGGCTCAGCTTGGAGCTGGAGAGAGACGCCAGGCTGAAGGGCCTGAGCACACAGTTTTTGTTGGAGACTTGGCACCTGATGTTACCGACCACATGCTTACTGAAACGTTTAAAGCTGTGTATTCCTCTGTCAAGGGAGCTAAAGTTGTGAATGATAGGACTACTGGACGGTCCAAGGGTTATGGATTTGTCAGGTTTGCGGATGAAAGTGAGCAGATTCGTGCCATGACTGAAATGAATGGTCAATACTGCTCATCAAGGCCTATGCGTACTGGTCCTGCTGCCAACAAGAAGCCTCTTACAATGCAACCAGCTTCATATCAGAACACTCAAGGAAATTCAGGAGAAAGTGATCCAACTAACACAACAATTTTTGTTGGAGCTGTGGATCAAAGTGTAACAGAAGATGATTTGAAGTCAGTTTTTGGTCAATTTGGTGAACTAGTTCATGTGAAAATACCCGCAGGAAAACGTTGCGGATTTGTTCAATACGCCAATAGGGCATGTGCTGAGCAAGCACTTTCTGTGTTGAACGGAACACAACTTGGGGGACAAAGCATTCGTCTTTCATGGGGTCGCAGTCCTTCCAACAAACAGACTCAACCTGATCAAGCCCAGTATGGTGGTGGTGGAGGATACTATGGGTATCCTCCTCAAGGATATGAAGCATACGGATATGCACCTCCTCCTCAGGACCCTAACGCCTACTACGGTGGTTATGCTGGGGGCGGCTATGGAAACTACCAGCAGCCTGGTGGATACCAGCAGCAACAGCAGTGAAGCATGATGTGTAAGTCGTGATCGAGCTGAAGTTGTAGAAAGCTGTAACCGTTTGACAATGGTGAATGAATTATTGAAGTGGATGTGTATTAGCTCTTCTTGTCTCAGATTCTCTCTTCAACTCTTTTTTTTTTCTTTTGGATTATTTTTCTTTCGCGTGGCTATTGTTGAGTGTCCTTGCAAGTCATAACAAAAAGCTTAAACCCAAGTGTTTTTTGTCATGACTAATATGACCATTATGTTTTCTTGCTGTACCATTTCTTCTTGTATCACCTATGACTTCCAATTATTCAGTAGTACCCTCATAATTTTTCAATAATACTCGTTTTGTGATCCTATTATAGTTGATTCGTTTTCAATATATAGTAGAATTGTGATG
CDS Sequence
Protein Sequence