AT4G26690

Gene Details

Gene ID: AT4G26690
Gene Symbol: GDPDL3, GPDL2, MRH5, SHV3
Gene Name: Glycerophosphodiester phosphodiesterase (GDPD) like 3, GLYCEROPHOSPHODIESTERASE-LIKE 2, MUTANT ROOT HAIR 5, SHAVEN 3
Description: PLC-like phosphodiesterase family protein;(source:Araport11)
TAIR Accession: locus:2116377
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Functional Descriptions

PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
PO:0000014 — rosette leaf — hoja en roseta (Spanish, exact), ロゼット葉 (Japanese, exact)
PO:0000256 — root hair cell — célula del pelo de la raíz (Spanish, exact), 根毛細胞 (Japanese, exact)
PO:0000282 — trichome — tricoma (Spanish, exact), 毛茸、糸状体、毛 (Japanese, exact), seta (related), setae (related), capilli (narrow), capillus (narrow), cilia (narrow), cilium (narrow), glochid (narrow), glochidia (narrow), glochidium (narrow), hair (narrow), lepides (narrow), lepis (narrow), non-secretory trichome (narrow), scale (narrow), squama (narrow), squamae (narrow), squamella (narrow), squamellae (narrow), squamule (narrow), barb trichome (broad), bristle (broad)
PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)

GO:0010442 — acts upstream of or within — guard cell morphogenesis
GO:0005886 — located in — plasma membrane
GO:0009932 — acts upstream of or within — cell tip growth
GO:0052541 — acts upstream of or within — plant-type cell wall cellulose metabolic process
GO:0016301 — enables — kinase activity
GO:0010053 — acts upstream of or within — root epidermal cell differentiation
GO:0005829 — located in — cytosol
GO:0048765 — acts upstream of or within — root hair cell differentiation
GO:0016020 — located in — membrane
GO:0008889 — enables — glycerophosphodiester phosphodiesterase activity
GO:0006629 — involved in — lipid metabolic process
GO:0010026 — acts upstream of or within — trichome differentiation

RIKEN 15-1096-1 — Homozygotes: Tip growth in almost all root hair cells was blocked due to rupture of the tip.
SALK_024208 — Homozygotes: Tip growth in almost all root hair cells was blocked due to rupture of the tip.
SALK_056562 — Short, wide burst hairs
shv3-1 — Homozygotes: Tip growth in almost all root hair cells was blocked due to rupture of the tip.
shv3-2;svl1-1 — Increased anthocyanin accumulation. Collapsed trichomes.Brown discoloration around endodermis in the hypocotyl and root due to ectopic lignification. Guard cells are larger than WT due to swollen ventral sides. Swollen hypocotyl epidermis with uneven surface. Four-day old dark-grown seedlings have shorter, thicker hypocotyls than WT. Cell wall analysis: reduced crystalline cellulose. Increased starch content. Neutral sugar content is same as WT. Increases protein. Increased uronic acid and decreased amount of methyl esterification.

Functional Keywords

Literature and News

Gene Resources

Sequences

cDNA Sequence

>AT4G26690.1
TAATCATCAGACTTTTTTTGATAATCTATACTTAATTTAAATTAATCAACGATCGTATAAATGAGAATCCCACAAACCAAATAGCCAGAACTAATAACAAGACTCTTTCTCTCTCCACCTCTCTTTCTCTCTTAAATTTCGTTCTGTCTCCGGCGAAGTCGCCGGCGGGAAGCTAAAAGGCAGGTTAGAACGAATTCCCGGCAGACAATCCAACAATGCGAGGGTTATTACGAGCTTCATCGCTTCTTCTCTGTGGTGTTATTCTGATTCAGCTGCTTGCTGCTCAAATCCATGCTCAAAGTAAAAAACCTAAAAGTCCATGGCCAACGCTCACTGGTGATCCTCCTCTTGTGATAGCTCGTGGTGGATTCTCTGGATTGTTCCCAGATTCGAGTTACGATGCTTACAATTTCGCAATTCTGACAAGTGTACCAGATGCTGTTCTATGGTGTGATGTTCAGCTAACCAAAGATGCTCTTGGTATTTGCTTCCCTGATTTAACAATGAGAAATTCTTCATCTATTGAAGCTGTTTACCCTACTCGACAAAAATCTTACCCGGTTAACGGAGTTCCTACTTCCGGTTGGTTCACCATTGATTTCTCCTTGAAAGATCTCAAAGATGTTAACTTGATCCGAGGTATTTTATCTCGGTCAGAAAAGTTCGATGGTAATTCTAACCCGATTATGACGGTTCAAAGCGTATCCACGCAGATGAAACCATCATTCTTCTGGTTAAATGTTCAGCACGATGCGTTCTACGCGCAGCACAATTTGAGCATGAGCAGTTTTCTGGTTGCAGCTTCAAAAACTGTTCTCATTGACTTCATCTCTTCCCCTGAAGTGAACTTCTTTAAGAAAATTGCTGGTCGGTTCGGGCGTAATGGACCAAGTCTTGTGTTCCGGTTTCTTGGTCAAGACGAGTTCGAGCCAACGACAAACAGAACTTACGGCTCTATCTTGAGTAACTTGACTTTTGTCAAGACGTTTGCTTCAGGGATTCTTGTCCCCAAGTCTTACATATTGCCACTTGATGACCAGCAGTACTTGCTTCCTCATACATCCTTGGTTCAAGATGCTCACAAAGCAGGATTAGAAGTTTTTGTGTCAGGTTTTGCAAATGATATTGATATTGCACACGACTACAGTTTCGATCCAGTCTCTGAGTATCTATCTTTTGTGGACAATGGCAACTTCTCTGTTGATGGTGTGCTCTCTGATTTTCCCATAACTGCATCTGCATCCCTTGATTGCTTCTCCCACGTTGGCAGAAACGCTACAAAACAAGTGGATTTTCTTGTTATAACCAAAGATGGTGCGAGTGGAGACTATCCTGGATGTACAGACTTGGCATATAAGAAGGCAATCAAAGATGGTGCTGATGTAATCGATTGCTCGGTCCAATTGTCCAGCGATGGTACACCCTTTTGCTTAAGTTCGATCGATCTCGGGAACAGCACGACGGTCTCCCTAACTGCTTTCAGAAACCGTTCAACAACTGTTCCTGAGTTGGGCTCACTTGGTGCAATATACACTTTCAGTCTCACATGGGCTGAGATCCAGACCTTGACTCCTGCTATTTCAAACCCCTACAGAGTAACCAGCCTGTTTAGGAATCCAAAACAGAAAAATGCTGGGAAGCTTTTCTCACTTTCTGATTTCCTAAGCTTGGCAAAAAACTCCACCTCTCTCTCCGGTGTTTTGATCAGTGTAGAGAATGCGGCATACCTGAGAGAGGAGCAAGGGCTCGACGTTGTCAAAGCGGTTCTTGATACACTCACACAGACTGGCTACAGCAATAGTACAGCCACAAAGGTCATGATTCAGTCAACAAACAGCTCGGTTCTAGTTGACTTCAAGAAGCAGAGCCAGTACGAGACTGTCTACAAAGTTGAAGAAAACATCCGTGATATTCTCGACTCTGCTATTGAAGACATAAAGAAATTCGCTGATGCTGTTGTGATCCAAAAATTATCAGTCTTTCCTGTCGCTCAGTCGTTCATCACAACGCAAACCAATGTTGTGGAGAAGCTGCAGAAGTCTCAGCTCCCAGTTTATGTGGAACTGTTTCAGAATGAGTTTTTATCTCAACCATATGACTTCTTTGCTGATGCAACCGTTGAGATAAACTCTTATATCACTGGAGCCGGTATAAATGGAACCATCACCGAGTTCCCTTTTACAGCTGCAAGATACAAAAGGAATCTATGTTTGGGCAGAAAAGAAACTATACCTTACATGGCCCCTGCCCAACCCGGTGCCCTCTTAACCCTTGTGAGTCCTACTGCCTTTCCTCCAGCCGAAGCTCCAAACCCGGTTTTCACAGATGCTGATGTCACTGAGCCACCACTACCTCCGGTTACCGCAAAAGCCCCAACCTCATCCCCTGGAACCCCATCAACCAATGCACAAGCACCTAGTGGACAAACCCGAATCACTCTATCTCTTCTACTTTCTGTTTTCGCAATGGTTCTTGCCTCTCTTCTACTTCTGTGATCAACCCTTGATCTCATCTCCTCTGTTGATAATGTCTTCCACCCTCGTAAGATTTCCCTGTGTGTGACTCAGTCAAATCTTAACAGCCAGAACCATAAAATTTTTCCGCTAGCGAGTCTTCGTGACAACCTTCTGTTTATTTGCAGTGACGACTTCTCTATGCATGTCGTCTGCTTATATTCTAGTTCTGTCCAAAAAACAACAGGTTATTCTTTGAGTGTGACTTTCCCTCGGATTCATTTGAGATATTCATTTGTTGTTGTATCATATACTCTTATAATATTTATGAGACTGTATCCTTTATAAACACGATCAATCTCTTTTTCCACTGAATAAAAGAAATTGATTTTTTTTTGGTT

CDS Sequence

Protein Sequence