Gene Details:
- Gene ID: AT4G26670
- Gene Symbol: HP20
- Gene Name: hypothetical protein 20
- Description: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein;(source:Araport11)
- TAIR Accession: locus:2116367
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0009707 — located in — chloroplast outer membrane
- GO:0009507 — located in — chloroplast
- GO:0009941 — is active in — chloroplast envelope
- GO:0045039 — involved in — protein insertion into mitochondrial inner membrane
- GO:0005515 — enables — protein binding
- GO:0009941 — located in — chloroplast envelope
- GO:0045036 — involved in — protein targeting to chloroplast
- GO:0005622 — located in — intracellular anatomical structure
- GO:0005739 — located in — mitochondrion
- GO:0042803 — enables — protein homodimerization activity
- GO:0008320 — enables — protein transmembrane transporter activity
Germplasm Phenotype:
- Athp20;1 — Some delay in chlorophyll accumulation in etiolated seedlings during the first 6?8 h of illumination of greening experiments under low white light conditions (30?40 µE m&
- Athp20;2 — Some delay in chlorophyll accumulation in etiolated seedlings during the first 6?8 h of illumination of greening experiments under low white light conditions (30?40 µE m&
- SALK_020671C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:no change,oxidative stress:no change,osmotic stress:decreased,salt stress:no change,ABA:increased,hypoxia:no change.
- SALK_074935C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:no change,oxidative stress:no change,osmotic stress:increased,salt stress:increased,ABA:no change,hypoxia:no change.
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Genome-wide expression profiling Arabidopsis at the stage of Golovinomyces cichoracearum haustorium formation. DOI: 10.1104/pp.107.111286 ; PMID: 18218973
- The plant Apolipoprotein D ortholog protects Arabidopsis against oxidative stress. DOI: 10.1186/1471-2229-8-86 ; PMID: 18671872
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. DOI: 10.1074/mcp.M300030-MCP200 ; PMID: 12766230
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Sequences:
cDNA Sequence
- >AT4G26670.1
GAAACGCATCGTTTAGTATCGTCGTCTTCTGGGGAAAATATCTTTTTTTTTAAACACTATCAATTCGACTGGAAAAAGGATATTTCCAGATTAGGTAGAGAGAGAGCAAAAGTACTTTCATTCAGACTTCAGTTTAAGCTATGGCGGCGAACGATTCTTCAAATGCTATTGACATCGACGGGAATCTCGACTCCGATTCGAATCTTAACACTGACGGTGACGAAGCGACCGATAATGATTCCTCGAAGGCATTGGTTACTATCCCTGCTCCAGCCGTTTGTCTTTTCCGGTTCGCCGGAGATGCTGCTGGTGGCGCCGTTATGGGCTCTATCTTCGGATATGGTTCAGGATTGTTCAAGAAGAAAGGCTTCAAAGGATCATTTGCAGATGCAGGGCAGTCTGCTAAGACTTTTGCTGTTTTATCTGGAGTCCACAGTTTGGTTGTTTGCCTTCTGAAGCAAATCCGAGGCAAAGATGACGCCATTAATGTTGGAGTAGCAGGGTGTTGCACTGGTCTTGCTCTTAGTTTCCCTGGTGCTCCACAGGCTCTTCTACAGAGTTGTCTCACGTTTGGGGCATTCTCTTTTATTCTTGAGGGACTCAACAAAAGACAAACAGCTTTGGCACACTCGGTCTCGTTGAGACACCAAACCGGACTGTTCCAAGATCATCATCGTGCTTTACCACTCTCTCTTGCTCTCCCGATCCCTGAAGAAATCAAAGGAGCCTTTTCTTCTTTCTGCAAGTCCTTAGCTAAACCAAGGAAGTTCTAATCTCGTCTTATTATTCTCCCTTTCTTGTGTCTTAGGCTCTCTCTATGTAGATGTAAAATTTTCCCGCTTTTGTTGTACTTTGTGAGACATGTTTTGTGAAAGGCTTTTTGCAAGAGCCAATTTGAAGAGAAAAAGAGTTGTGTACTTTTTGCTTTATTGAATACGATCTTTACTTTAGACTTTACTACTTCAAATCAATTACATTTGTATATCACGTTCTTAATTTCGCTCCGAAAAGGTAAGACAATGATCACAATTCTCCAATGATATTAGGACCAAAACTTTGTATCTGAAACCAGTTACAGTAATTTCTTATGACATTGTTTCTTTAAGGAATCTCAATGTAAATCTGAAATCACTTGCCTTGTTTCTGCCTGAGGCGTTCTTTGACAAAATCATTACGGGCTTTAGTACGAGCTTGCTGAGGAGCAACGTTGAGATACGAAAAATGGATTCCAATGGCGAAAAGAGCAGCCCCTGAGGCAAAAAATGCCACCGTCATTGCCAGTTTTCTTTGTGAAGATGGATAGCAAAACGACATCCTCAAAGCTATCAACTCT
CDS Sequence
Protein Sequence