Gene Details:
- Gene ID: AT4G26410
- Gene Symbol: RHIP1
- Gene Name: RGS1-HXK1 INTERACTING PROTEIN 1
- Description: chromosome-associated kinesin;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Germplasm Phenotype:
- CS69137 — Longer roots in young seedlings; larger inflorescence.
- CS69138 — Longer roots in young seedlings; larger inflorescence.
- CS69143 — Longer roots in young seedlings; larger inflorescence. YFP expression localized to the plasma membrane without glucose, and endocytosed upon D-glucose treatment.
- CS69144 — Longer roots in young seedlings; larger inflorescence. YFP expression localized to the plasma membrane without glucose, and endocytosed upon D-glucose treatment.
- CS69145 — Longer roots in young seedlings; larger inflorescence. YFP expression localized to the plasma membrane without glucose, and endocytosed upon D-glucose treatment.
- CS69146 — Longer roots in young seedlings; larger inflorescence (assumed because rhip1-1 background). YFP expression localized to the plasma membrane without glucose, and endocytosed upon D-glucose treatment.
- CS69147 — Longer roots in young seedlings; larger inflorescence (assumed because rhip1-1 background). YFP expression localized to the plasma membrane without glucose, and endocytosed upon D-glucose treatment.
- CS69148 — Longer roots in young seedlings; larger inflorescence (assumed because rhip1-1 background). YFP expression localized to the plasma membrane without glucose, and endocytosed upon D-glucose treatment.
- SALK_061002 — Homozygous mutants showed less sensitivity to 6% glucose than Col-0 seedlings.
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis. DOI: 10.1104/pp.105.063743 ; PMID: 16166256
- Comprehensive transcriptional profiling of NaCl-stressed Arabidopsis roots reveals novel classes of responsive genes. DOI: 10.1186/1471-2229-6-25 ; PMID: 17038189
- The FLX gene of Arabidopsis is required for FRI-dependent activation of FLC expression. DOI: 10.1093/pcp/pcm176 ; PMID: 18156133
- Genetic analysis reveals that C19-GA 2-oxidation is a major gibberellin inactivation pathway in Arabidopsis. DOI: 10.1105/tpc.108.058818 ; PMID: 18805991
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Identification and testing of superior reference genes for a starting pool of transcript normalization in Arabidopsis. DOI: 10.1093/pcp/pcq128 ; PMID: 20798276
- Reference genes for normalizing transcription in diploid and tetraploid Arabidopsis. DOI: 10.1038/srep06781 ; PMID: 25345678
- Cooperative control between AtRGS1 and AtHXK1 in a WD40-repeat protein pathway in Arabidopsis thaliana. DOI: 10.3389/fpls.2015.00851 ; PMID: 26528314
- MRF Family Genes Are Involved in Translation Control, Especially under Energy-Deficient Conditions, and Their Expression and Functions Are Modulated by the TOR Signaling Pathway. DOI: 10.1105/tpc.17.00563 ; PMID: 29084871
- Arabidopsis NSE4 Proteins Act in Somatic Nuclei and Meiosis to Ensure Plant Viability and Fertility. DOI: 10.3389/fpls.2019.00774 ; PMID: 31281325
Sequences:
cDNA Sequence
- >AT4G26410.1
AAAACCAACTTCTAATTTGGAATCAAATTGAACCGAATCGAACCGGTTGAAGTTGAAAGAAGGAGAAAAGGCGTTGTCTCCGTGCGAGAAAGGCAAATCGGAGACGATGAGCGAAACCGAAGCAACCGGCGTTACCGATGATTCGGCTCCAGCGATTGAGACTGAAACTGTTTCTGATGCGATGGAGCATACAGCGATCGGAGTGGTTGAATCGGTGGAAGGAGCCATAGAAGGAGCAGAGAAATGGGTGGGTGATTTGCAACGGACGGTGAAGGAATCGAAGGATACCGCAATGCGTTCTGCTCGTTCCCTCCGTGAAAATTCTACCTCTCAGTTCCGCTCTATACAGGATTTCATTCCACATGCTTTGACTCAGTATAAGACCTATGAGAATGCTTTCTTCAGTAAAGTTACAGACGAATTGATATACGCAAAAGAGCATCCGGCTGCTGCTATTGGGATTGGTGTCGCTGCTAGTCTCGTTCTGATGCGAGGCCCAAGAAGATTCTTGTTTCGTAATACACTAGGCCGATTTCAGAGCGAAGAGGCACAATTCTTGAAAGCTGAGAAGCATGTTCAGGAGTTAAACATGTCTGTAGACTTGATGAAAAAGGAGAGCAGGAAATTGCTTGAGAGGACGGCTTTAGCAGAGAAGGATATGAAACGTGGTCTCTCTGAGCTCATGAACTCTGGAAACGATATACATCGTCTTGCTAAGTCCGTCCACAAAGCTGAATGTGAAGCTGCTGATTTGATGGACGGACTTCGGCAAATTCCTGGAAGGGATGCTATCAAGCTTAGAGCTGAAGTGGCTTCCATGACTTCGCTTTTGAGACAGAAGAGGATTGCATTGAACAAAAGGATCATGGGTATGTCGGACCTAGGAGTTTCCGTCTGATATATCCAACACAAATCCACAATTTCTTGGGTTTTCGCAACCAAAGTTTGTTAGGTATTTTCCAATTGAATCGCAGTGTACTCTCGTCCATCGAACATCCAACTCTGTCTGAAACCAAAATCTGAGCTTGAGACAGAACTTGTATACTGTGTTTTTGCCTGCTTCCTAAGATTTCTCGCTCAGAGAGAATTAATTGAGTCACAAAAATGTGTGTGCTTGGTTTGGAAATCCTTAATTATGTAGTCTAGAAGATTTATGAGAAACATAGAAAGTTACTGAATCAATCAGTAATGAAAATTTATAGATAACATGAAGGTTTTTAATGGGCTAGTTTTGCATCGTAAGTCTATG
CDS Sequence
Protein Sequence