Gene Details:
- Gene ID: AT4G26000
- Gene Symbol: AtKH20, PEP
- Gene Name: PEPPER
- Description: RNA-binding KH domain-containing protein;(source:Araport11)
- TAIR Accession: locus:2120755
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0005634 — located in — nucleus
- GO:0048467 — acts upstream of or within — gynoecium development
- GO:0005515 — enables — protein binding
- GO:0048579 — involved in — negative regulation of long-day photoperiodism, flowering
- GO:0048577 — involved in — negative regulation of short-day photoperiodism, flowering
- GO:0005737 — is active in — cytoplasm
- GO:0010468 — involved in — regulation of gene expression
- GO:0009299 — involved in — mRNA transcription
- GO:0003729 — enables — mRNA binding
- GO:0005634 — is active in — nucleus
- GO:0048367 — acts upstream of or within — shoot system development
- GO:0006396 — involved in — RNA processing
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , vascular leaf , cotyledon
Literature:
- Involvement of the pepper antimicrobial protein CaAMP1 gene in broad spectrum disease resistance. DOI: 10.1104/pp.108.123836 ; PMID: 18676663
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Overexpression of the pepper antimicrobial protein CaAMP1 gene regulates the and disease-related proteome in Arabidopsis. DOI: 10.1007/s00425-011-1473-1 ; PMID: 21735195
- Hydrogen sulfide: A novel component in Arabidopsis peroxisomes which triggers catalase inhibition. DOI: 10.1111/jipb.12779 ; PMID: 30652411
- Genome-Wide Characterization and Expression Analysis of KH Family Genes Response to ABA and SA in Arabidopsis thaliana. DOI: 10.3390/ijms23010511 ; PMID: 35008936
- High diversity of plastidial promoters in Arabidopsis thaliana. DOI: 10.1007/s00438-007-0222-4 ; PMID: 17333279
Sequences:
cDNA Sequence
- >AT4G26000.1
GGTTAAACATAGACCTAATACATAGCTCATATGGACAATTTTTCGACAAAACAAAAATGATAGCAAATGGGCTAAAATGGTTTCATATCGAAAAGCCCAAACCATTAAGCCAAAACGACGTCGTACGATATGACAGCGGCGATTCCTATAACCACCACCAGAGGTTAAAAAGTCTCTCTCTTTAGCTATCTTTTTTGTGTTACCGGTTCAAATGGCCGCCGTCGCAGATTCCGTTGAGAACAACGGTTCCATAAACCTCCCTGAGAATGAAAACCTTATACCGGCGGGATTCAGTGCCGCCGCATTGCTTGACGAAAACTCTGGCGCTTTCCCTGAATTGAATCAGCCCGATAGCTTAGCTGCTGCTGAGACTACCTTCCCCGATACGAACGATTCCGCGGAGGAGAGGTGGCCAGGTTGGCCTGGTGATTGCGTGTTTCGTATGATCGTTCCGGTGACTAAAGTCGGAGCTATTATTGGACGCAAAGGTGACTTTATAAAGAAGATGTGTGAGGAGACTCGTGCTCGTATCAAAGTCCTTGATGGTCCTGTTAATACTCCCGATCGCATCGTGTTAATATCTGGTAAGGAAGAACCAGAGGCCTACATGTCACCGGCAATGGACGCAGTGTTGAGGGTGTTTAGACGTGTTTCAGGGTTGCCTGATAATGATGATGATGATGTTCAAAACGCTGGAAGTGTCTTCTCTTCAGTGCGTTTATTAGTTGCTTCAACGCAGGCGATTAATTTGATTGGAAAACAAGGATCTTTGATTAAGTCTATAGTAGAGAACTCTGGTGCATCAGTTCGTATTTTATCAGAAGAGGAAACACCGTTTTATGCTGCACAGGATGAGAGGATAGTGGATTTGCAAGGGGAAGCTTTAAAGATTCTTAAAGCATTAGAAGCCATTGTTGGACACCTTAGGAGATTTTTAGTTGACCATACTGTTGTCCCTCTCTTCGAGAAGCAATATCTAGCTAGGGTCTCTCAAACTCGCCAGGAAGAACCGTTAGCTGAAAGCAAGTCATCTCTGCATACTATTTCGTCAAATCTAATGGAGCCTGATTTCTCCCTCTTAGCACGGAGGGAACCTTTGTTTCTGGAGCGCGATTCTCGGGTGGACTCACGTGTTCAGCCTTCGGGAGTTTCTATCTACAGTCAGGATCCTGTACTGTCTGCCAGACACTCCCCAGGTCTTGCTCGGGTTTCTTCTGCTTTTGTGACACAGGTATCTCAAACGATGCAAATACCATTCTCCTATGCAGAGGATATTATTGGTGTAGAAGGAGCTAATATAGCCTATATCCGTCGAAGAAGCGGAGCTACCATAACCATTAAAGAGAGTCCGCATCCTGATCAAATCACAGTGGAAATCAAAGGCACAACTTCTCAAGTACAAACTGCTGAGCAACTAATTCAAGAGTTCATCATCAATCACAAGGAACCAGTTTCGGTATCAGGGGGATATGCCAGAATCGACTCTGGATATGTACCTGCATATCCTCCTCAGCTAAGTAACCGTCAAGAGCCGCTCCCGAGCACCTACATGGGCACAGAGCCGGTGCAGTACAGACCAACAGCATACTCTCAGCTGGGGGGTCCTTCTACCTACACACCGACCCTGACTGGGCAAACTTATGGTTCGGAATATAGACCAGCTTCTGATGTTGGTGGCTACAGCAGTTATAATCTTTGAATTGGTTGCTGTGTTTAAGTTTATTTGCAGATTAATTTCTCTTTAGAGAAAGGCTCATTTATAATATAATAGAGAGGGAAAAGGAACAAGTTCTAGAGAGCCAATGTAGTTGTTGGAATGTGTAATGTAAATCTAGGTGCCCTTTTTTTTTTTTTTTTTCATACCTCGATATATGTCACACTACGTTTCTGGTCAAATAAGAACATGTTTTTTCTTTCTTTTTTGTATGAATTTGTTTATCAGAAGTCAGAATGATTCAGTTTTAAGAAATTTTTAGTTAACGTTTTACAACAATAACCTGT
CDS Sequence
Protein Sequence