Information report for AT4G25990
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0005634 — located in — nucleus
- GO:0003674 — enables — molecular_function
- GO:0005634 — is active in — nucleus
- CS2110093 — faster growth, earlier time to flowering
- CS2110094 — yellowish young leaves; turn into pale-green mature leaves; retarded growth
- SALK_131539C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:decreased,cold:decreased,oxidative stress:no change,osmotic stress:decreased,salt stress:decreased,ABA:decreased,hypoxia:increased.
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Transcriptome analysis reveals specific modulation of abscisic acid signaling by ROP10 small GTPase in Arabidopsis. DOI: 10.1104/pp.105.068064 ; PMID: 16258012
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Sequence analysis and protein interactions of Arabidopsis CIA2 and CIL proteins. DOI: 10.1186/s40529-020-00297-z ; PMID: 32556735
- Arabidopsis CIA2 and CIL have distinct and overlapping functions in regulating chloroplast and flower development. DOI: 10.1002/pld3.380 ; PMID: 35106435
Gene Resources
- UniProt: C0SVJ8
- EMBL: AB493701, CP002687
- AlphaFoldDB: C0SVJ8
- EnsemblPlants: AT4G25990.2
- Gramene: AT4G25990.2
Sequences
cDNA Sequence
- >AT4G25990.2
CACACACTAACTTTAACCTCAAATTCAACAGTCATCAAGATTTTTCTCGGATTCTAATCAAACGTCCACAGGTGAAAATGTCCTCTTGTGCCTATAGCTTCGAGTTGGAAATGATGAAATCGCCGCCGTCAAACAACACTCCTTCACCGTCATCTACAATCTCTGAGACAAACTCTCCTCCGTTCTCAATCTCCACGAGAAGGCCACGAACTCCACGGAAACGTCCCAACCAAACATACGACGAAGCTGCGGCTCTCCTCTCCACCGCTTACCCTAAAATCTTCTCTTCCAAGAAGGCAAAAACTCAGATTTTCGGGACTAATAAATCTCCTCTCAGTGATTACGACGAAGCTTCTCAGTTGCTTCTTCCGTACGTATCCATCGAGGAGAACGAGTTTCTGTTCAATCCAACGATTCCAACGAAAACAGAACACTTCTTGGAGCAGAAGGAAGTCAGTTTTGATGACTTGGAGGTGAATGGGTTTGGAGTTTTAGACGATTTCGACGCGGAATCGATTTTAGATGAAGAGATTGAAGAAGGAATTGATAGTTTTATGGGGAATATTGAATCTAATGACGGAGATAGAGAAAATTGTTACAGAGTCGGTCGATTAGAGGAAATTATGAAGAATGCTTGGAACGGAAGGTTTCGTTTAGGGCTTGGTTTGAGAAGTTCTCTCCGACAAAACAACGACGAGAACTGGTGGAAATTTCCTACTGTGGAGTTTGATCAGATTTCGCCGAGAATTCAGACCACCGCCGCCGCAGCAGCTGATGATGGTCAATCCAATGTCGTGGATAGTAGCAAGATTAAAACGATTGTGACGGCGGAGGGAGACAAGAAAAAGAAAAAGAAGAAGAAGAAAAAGAAAGTGGCTCCGGCGGCGGCGGAATCAAAGAGCTCTGAAGTTACGGACTCGAATCCAAAGCTGGAGCAGAGAGTGAGTCCGTTGCTGAAGCTCGACTACGATGGGGTTTTAGAGGCTTGGTCAGGTAAGGAGTCACCGTTCTCCGACGAGATTCTTGGTTCGGACGCTGACGGAGTCGATTTTCATGTAAGGTTGGGTGAGATAGATTTGTTCGGAGAAAGTGGTATGAGAGAAGCAAGTGTGTTAAGGTATAAAGAGAAGCGGAGGAATAGACTCTTCTCCAAGAAAATCCGATATCAAGTTCGCAAGCTCAACGCCGACCAACGCCCGCGTATGAAGGTGAAAGATTGGCATTGTAATATTGTGGTTGTCTCTCATCAACAGGGACGATTTGTGAGAAGGCCCAACGCAAGGAATTTAAGTGGTCTACGATTATAAGAATAAGAGCCGAAAGAACTTAAGCTCTTTGATTCTCTTTTTGTTTTGTTCGTTCTTTTAATAGCCTAGGTTTTTTTTTTGTCATAAGGGAATGGGGGAAGAAATTAGTTGATTCGAGACAGCTAAGAATTATAACGAATACAACTTTATTTTGTCTTTTGGTAAAAACTACATGTTGAGACTTCAGAATTCATACATGTACACTATTAACGCCAAGGATGTAGTGGAAAATCGTACATTCAACTCT - >AT4G25990.1
CACACACTAACTTTAACCTCAAATTCAACAGTCATCAAGATTTTTCTCGGATTCTAATCAAACGTCCACAGGTGAAAATGTCCTCTTGTGCCTATAGCTTCGAGTTGGAAATGATGAAATCGCCGCCGTCAAACAACACTCCTTCACCGTCATCTACAATCTCTGAGACAAACTCTCCTCCGTTCTCAATCTCCACGAGAAGGCCACGAACTCCACGGAAACGTCCCAACCAAACATACGACGAAGCTGCGGCTCTCCTCTCCACCGCTTACCCTAAAATCTTCTCTTCCAAGAAGGCAAAAACTCAGATTTTCGGGACTAATAAATCTCCTCTCAGTGATTACGACGAAGCTTCTCAGTTGCTTCTTCCGTACGTATCCATCGAGGAGAACGAGTTTCTGTTCAATCCAACGATTCCAACGAAAACAGAACACTTCTTGGAGCAGAAGGAAGTCAGTTTTGATGACTTGGAGGTGAATGGGTTTGGAGTTTTAGACGATTTCGACGCGGAATCGATTTTAGATGAAGAGATTGAAGAAGGAATTGATAGTTTTATGGGGAATATTGAATCTAATGACGGAGATAGAGAAAATTGTTACAGAGTCGGTCGATTAGAGGAAATTATGAAGAATGCTTGGAACGGAAGGTTTCGTTTAGGGCTTGGTTTGAGAAGTTCTCTCCGACAAAACAACGACGAGAACTGGTGGAAATTTCCTACTGTGGAGTTTGATCAGATTTCGCCGAGAATTCAGACCACCGCCGCCGCAGCAGCTGATGATGGTCAATCCAATGTCGTGGATAGTAGCAAGATTAAAACGATTGTGACGGCGGAGGGAGACAAGAAAAAGAAAAAGAAGAAGAAGAAAAAGAAAGTGGCTCCGGCGGCGGCGGAATCAAAGAGCTCTGAAGTTACGGACTCGAATCCAAAGCTGGAGCAGAGAGTGAGTCCGTTGCTGAAGCTCGACTACGATGGGGTTTTAGAGGCTTGGTCAGGTAAGGAGTCACCGTTCTCCGACGAGATTCTTGGTTCGGACGCTGACGGAGTCGATTTTCATGTAAGGTTGGGTGAGATAGATTTGTTCGGAGAAAGTGGTATGAGAGAAGCAAGTGTGTTAAGGTATAAAGAGAAGCGGAGGAATAGACTCTTCTCCAAGAAAATCCGATATCAAGTTCGCAAGCTCAACGCCGACCAACGCCCGCGTATGAAGGTGAAAGATTGGCATTGTAATATTGTGGTTGTCTCTCATCAACAGGGACGATTTGTGAGAAGGCCCAACGCAAGGAATTTAAGTGGTCTACGATTATAAGAATAAGAGCCGAAAGAACTTAAGCTCTTTGATTCTCTTTTTGTTTTGTTCGTTCTTTTAATAGCCTAGGTTTTTTTTTTGTCATAAGGGAATGGGGGAAGAAATTAGTTGATTCGAGACAGCTAAGAATTATAACGAATACAACTTTATTTTGTCTTTTGGTAAAAACTACATGTTGAGACTTCAGAATTCATACATGTACACTATTAACGCCAAGGATGTAGTGGAAAATCGTACATTCAACTCT - >AT4G25990.3
CACACACTAACTTTAACCTCAAATTCAACAGTCATCAAGATTTTTCTCGGATTCTAATCAAACGTCCACAGGTGAAAATGTCCTCTTGTGCCTATAGCTTCGAGTTGGAAATGATGAAATCGCCGCCGTCAAACAACACTCCTTCACCGTCATCTACAATCTCTGAGACAAACTCTCCTCCGTTCTCAATCTCCACGAGAAGGCCACGAACTCCACGGAAACGTCCCAACCAAACATACGACGAAGCTGCGGCTCTCCTCTCCACCGCTTACCCTAAAATCTTCTCTTCCAAGAAGGCAAAAACTCAGATTTTCGGGACTAATAAATCTCCTCTCAGTGATTACGACGAAGCTTCTCAGTTGCTTCTTCCGTACGTATCCATCGAGGAGAACGAGTTTCTGTTCAATCCAACGATTCCAACGAAAACAGAACACTTCTTGGAGCAGAAGGAAGTCAGTTTTGATGACTTGGAGGTGAATGGGTTTGGAGTTTTAGACGATTTCGACGCGGAATCGATTTTAGATGAAGAGATTGAAGAAGGAATTGATAGTTTTATGGGGAATATTGAATCTAATGACGGAGATAGAGAAAATTGTTACAGAGTCGGTCGATTAGAGGAAATTATGAAGAATGCTTGGAACGGAAGGTTTCGTTTAGGGCTTGGTTTGAGAAGTTCTCTCCGACAAAACAACGACGAGAACTGGTGGAAATTTCCTACTGTGGAGTTTGATCAGATTTCGCCGAGAATTCAGACCACCGCCGCCGCAGCAGCTGATGATGGTCAATCCAATGTCGTGGATAGTAGCAAGATTAAAACGATTGTGACGGCGGAGGGAGACAAGAAAAAGAAAAAGAAGAAGAAGAAAAAGAAAGTGGCTCCGGCGGCGGCGGAATCAAAGAGCTCTGAAGTTACGGACTCGAATCCAAAGCTGGAGCAGAGAGTGAGTCCGTTGCTGAAGCTCGACTACGATGGGGTTTTAGAGGCTTGGTCAGGTAAGGAGTCACCGTTCTCCGACGAGATTCTTGGTTCGGACGCTGACGGAGTCGATTTTCATGTAAGGTTGGGTGAGATAGATTTGTTCGGAGAAAGTGGTATGAGAGAAGCAAGTGTGTTAAGGTATAAAGAGAAGCGGAGGAATAGACTCTTCTCCAAGAAAATCCGATATCAAGTTCGCAAGCTCAACGCCGACCAACGCCCGCGTATGAAGGTGAAAGATTGGCATTGTAATATTGTGGTTGTCTCTCATCAACAGGGACGATTTGTGAGAAGGCCCAACGCAAGGAATTTAAGTGGTCTACGATTATAAGAATAAGAGCCGAAAGAACTTAAGCTCTTTGATTCTCTTTTTGTTTTGTTCGTTCTTTTAATAGCCTAGGTTTTTTTTTTGTCATAAGGGAATGGGGGAAGAAATTAGTTGATTCGAGACAGCTAAGAATTATAACGAATACAACTTTATTTTGTCTTTTGGTAAAAACTACATGTTGAGACTTCAGAATTCATACATGTACACTATTAACGCCAAGGATGTAGTGGAAAATCGTACATTCAACTCT
CDS Sequence
Protein Sequence