Gene Details:
- Gene ID: AT4G25910
- Gene Symbol: ATCNFU3, NFU3
- Gene Name: NFU domain protein 3
- Description: NFU domain protein 3;(source:Araport11)
- TAIR Accession: locus:2120745
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0097428 — involved in — protein maturation by iron-sulfur cluster transfer
- GO:0009570 — located in — chloroplast stroma
- GO:0005739 — is active in — mitochondrion
- GO:0009507 — located in — chloroplast
- GO:0016226 — involved in — iron-sulfur cluster assembly
- GO:0005506 — enables — iron ion binding
- GO:0016226 — acts upstream of or within — iron-sulfur cluster assembly
- GO:0060090 — enables — molecular adaptor activity
- GO:0048564 — acts upstream of or within — photosystem I assembly
- GO:0009658 — acts upstream of or within — chloroplast organization
- GO:0005198 — enables — structural molecule activity
- GO:0051539 — enables — 4 iron, 4 sulfur cluster binding
Germplasm Phenotype:
- nfu3-1 — yellow pigmentation in leaves, reductions in plant size, leaf size, and growth rate, delay in flowering and seeding, and decreases in seed production.
- nfu3-2 — yellow pigmentation in leaves, reductions in plant size, leaf size, and growth rate, delay in flowering and seeding, and decreases in seed production.
Function-related keywords:
- root , vascular leaf , flower , stem , shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Characterization of a NifS-like chloroplast protein from Arabidopsis. Implications for its role in sulfur and selenium metabolism. DOI: 10.1104/pp.102.010280 ; PMID: 12427997
- Iron-sulphur cluster assembly in plants: distinct NFU proteins in mitochondria and plastids from Arabidopsis thaliana. DOI: 10.1042/BJ20021946 ; PMID: 12553879
- The FHY3 and FAR1 genes encode transposase-related proteins involved in regulation of gene expression by the phytochrome A-signaling pathway. DOI: 10.1046/j.1365-313x.2003.01741.x ; PMID: 12753585
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- The Arabidopsis chloroplastic NifU-like protein CnfU, which can act as an iron-sulfur cluster scaffold protein, is required for biogenesis of ferredoxin and photosystem I. DOI: 10.1105/tpc.020511 ; PMID: 15031412
- PIC1, an ancient permease in Arabidopsis chloroplasts, mediates iron transport. DOI: 10.1105/tpc.106.047407 ; PMID: 17337631
- Genome analysis of Chlamydomonas reinhardtii reveals the existence of multiple, compartmentalized iron-sulfur protein assembly machineries of different evolutionary origins. DOI: 10.1534/genetics.107.086033 ; PMID: 18493040
- Analysis of essential Arabidopsis nuclear genes encoding plastid-targeted proteins. DOI: 10.1371/journal.pone.0073291 ; PMID: 24023856
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- The plastidial Arabidopsis thaliana NFU1 protein binds and delivers [4Fe-4S] clusters to specific client proteins. DOI: 10.1074/jbc.RA119.011034 ; PMID: 31911438
- Iron-sulphur cluster assembly in plants: distinct NFU proteins in mitochondria and plastids from Arabidopsis thaliana. DOI: 10.1042/BJ20021946 ; PMID: 12553879
Sequences:
cDNA Sequence
- >AT4G25910.1
AAATCATCTCCAAGACGTATCAATATCATCATCAATCCACCAATGAAAAGTTCTCTCTTTTTTTTTCCCACTCTTACTCTGTTCTCGCTACAGAATCTCCTGGGAAAAAAAAAAAAGAAACTTGATCCACCCGAATTCCCCAAATCTTCACAATTTCTGGAAACTCTCTCGATCGTGAAGCAGAAAAGTGAGGTTCCAAATGGGTTCTGTTTCGGGTCAAACCCGAATTACAACGATGAACCTCTCGCTCTCAACAGCAGAGAAGAACCCTAATTTCCGCTCGTCGCTTCTCAATTCTAAGAACGCAATTTCAGATACTTTAGGGGTCTCTTCCAAATGCAGTACATTCCTCAGGGGTCAATTTCAAAGAATACATTTTTCTTGGCTACAACACACTCGACCTTTGAGAAAACGAACAGTATTTGGTCACGTGAGCTGCGTCATGCCGTTAACGGAAGAGAATGTGGAGAGAGTGTTAGACGAAGTACGACCATCTCTAATGGCCGACGGAGGAAACGTGGCGTTGCACGAAATCGACGGACTTGTGGTGGTTTTAAAGCTACAAGGAGCTTGTGGTTCGTGTCCTAGCTCATCAATGACGTTGAAGATGGGAATCGAGAGTCGTCTTCGAGACAAGATTCCAGAGATCATGTCCGTTGAGCAGTTTCTTGAATCCGAGACAGGAGGTTTAGAGCTGAACGATGAGAACATTGAGAAGGTTCTCTCTGAGTTAAGGCCGTACCTATCCGGTACTGGAGGTGGGGGGCTTGAGTTAGTTGAGATTGATGGTTACGTGGTCAAGGTTCGACTCACTGGACCAGCTGCTGGAGTCATGACTGTTCGTGTCGCGTTGACTCAAAAACTGAGGGAAACAATTCCTTCTATAGGTGCAGTCCAGCTTCTAGAGTGACATTAACCTTTTTATTTTGTAACTTATATACAAGGCCTATTTTTGATTCAATATATTTTATTTCCAATTATATAATTAGTACAACTAATACAATAACCATTTCTGTTGAAGAAAAAGGAAAAGAAAAAAAAAGTATCCTATGTATGAAGGACATTTTCTCTAGTGATCCTTGTTTTTAGGTAACAGTTATAAAATATTCATGACTTGACTACACAAAGATAATCGAACTTAAAGAGTT
CDS Sequence
Protein Sequence