Gene Details:
- Gene ID: AT4G25810
- Gene Symbol: XTH23, XTR6
- Gene Name: xyloglucan endotransglucosylase/hydrolase 23, xyloglucan endotransglycosylase 6
- Description: xyloglucan endotransglycosylase 6;(source:Araport11)
- TAIR Accession: locus:2117567
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0071310 — acts upstream of or within — cellular response to organic substance
- GO:0010411 — involved in — xyloglucan metabolic process
- GO:0009737 — acts upstream of or within — response to abscisic acid
- GO:0005576 — located in — extracellular region
- GO:0005794 — located in — Golgi apparatus
- GO:0009505 — located in — plant-type cell wall
- GO:0016762 — enables — xyloglucan:xyloglucosyl transferase activity
- GO:0007165 — acts upstream of or within — signal transduction
- GO:0010035 — acts upstream of or within — response to inorganic substance
- GO:0030247 — enables — polysaccharide binding
- GO:0042546 — involved in — cell wall biogenesis
- GO:0004553 — enables — hydrolase activity, hydrolyzing O-glycosyl compounds
Function-related keywords:
- shoot axis apex , vascular leaf , stamen , sepal , flower , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- A comprehensive expression analysis of all members of a gene family encoding cell-wall enzymes allowed us to predict cis-regulatory regions involved in cell-wall construction in specific organs of Arabidopsis. DOI: 10.1093/pcp/pce154 ; PMID: 11673616
- Transcriptome changes for Arabidopsis in response to salt, osmotic, and cold stress. DOI: 10.1104/pp.008532 ; PMID: 12481097
- Changes in gene expression in Arabidopsis shoots during phosphate starvation and the potential for developing smart plants. DOI: 10.1104/pp.103.020941 ; PMID: 12805589
- Monitoring expression profiles of Arabidopsis gene expression during rehydration process after dehydration using ca 7000 full-length cDNA microarray. DOI: 10.1046/j.1365-313x.2003.01774.x ; PMID: 12795706
- BES1 accumulates in the nucleus in response to brassinosteroids to regulate gene expression and promote stem elongation. DOI: 10.1016/s0092-8674(02)00721-3 ; PMID: 12007405
- Proteomics of loosely bound cell wall proteins of Arabidopsis thaliana cell suspension cultures: a critical analysis. DOI: 10.1002/elps.200305608 ; PMID: 14595688
- Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. DOI: 10.1104/pp.103.034736 ; PMID: 15047898
- Binding of arabinogalactan proteins by Yariv phenylglycoside triggers wound-like responses in Arabidopsis cell cultures. DOI: 10.1104/pp.104.039370 ; PMID: 15235117
- A new class of transcription factors mediates brassinosteroid-regulated gene expression in Arabidopsis. DOI: 10.1016/j.cell.2004.11.044 ; PMID: 15680330
- Transcriptional divergence of the duplicated oxidative stress-responsive genes in the Arabidopsis genome. DOI: 10.1111/j.1365-313X.2004.02295.x ; PMID: 15634198
- Proteomic analysis of secreted proteins from Arabidopsis thaliana seedlings: improved recovery following removal of phenolic compounds. DOI: 10.1016/j.phytochem.2004.12.013 ; PMID: 15694452
- and darkness-regulated Arabidopsis genes: a focus on calmodulin-like and XTH genes. DOI: 10.1111/j.1469-8137.2004.01238.x ; PMID: 15720654
- Microarray analysis of genes that respond to gamma-irradiation in Arabidopsis. DOI: 10.1021/jf0486895 ; PMID: 15713015
- Poplar carbohydrate-active enzymes. Gene identification and expression analyses. DOI: 10.1104/pp.105.072652 ; PMID: 16415215
- The Arabidopsis MAP kinase kinase MKK1 participates in defence responses to the bacterial elicitor flagellin. DOI: 10.1111/j.1365-313X.2006.02888.x ; PMID: 17059410
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptional profiling of pea ABR17 mediated changes in gene expression in Arabidopsis thaliana. DOI: 10.1186/1471-2229-8-91 ; PMID: 18783601
- Thaxtomin A affects CESA-complex density, expression of cell wall genes, cell wall composition, and causes ectopic lignification in Arabidopsis thaliana seedlings. DOI: 10.1093/jxb/ern344 ; PMID: 19269997
- Light quality-mediated petiole elongation in Arabidopsis during shade avoidance involves cell wall modification by xyloglucan endotransglucosylase/hydrolases. DOI: 10.1104/pp.110.162057 ; PMID: 20688978
- The COP1 Target SHI-RELATED SEQUENCE5 Directly Activates Photomorphogenesis-Promoting Genes. DOI: 10.1105/tpc.18.00455 ; PMID: 30150309
- Two receptor-like protein kinases, MUSTACHES and MUSTACHES-LIKE, regulate lateral root development in Arabidopsis thaliana. DOI: 10.1111/nph.16599 ; PMID: 32278327
- The brassinosteroid-responsive xyloglucan endotransglucosylase/hydrolase 19 (XTH19) and XTH23 genes are involved in lateral root development under salt stress in Arabidopsis. DOI: 10.1111/tpj.14905 ; PMID: 32656780
- Proteomics of loosely bound cell wall proteins of Arabidopsis thaliana cell suspension cultures: a critical analysis. DOI: 10.1002/elps.200305608 ; PMID: 14595688
- The auxin influx carrier LAX3 promotes lateral root emergence. DOI: 10.1038/ncb1754 ; PMID: 18622388
Sequences:
cDNA Sequence
- >AT4G25810.1
ATCTTAGCTGTGTTCCATACGCCCATCTAGAAAAAGCGACGATGGTCAAGATTAAATAACTGTATTTGAAAAACCAAAACCGCGTCACCAACTCCAAAGCCATTACCATTAGCCATCACTTTCCATCTTCCAGCTGTTCGAATCAGGACGCCCCTTTTTCTTCACCAAACCCATCGGCCGATAACGAACCTTCCTCTCTGACTGCCTCTGCTCTTACTATAAATACAACCAATACGACCTCATCCAAAACCCAACAAACCTAAGCTCAAAGCCCACCAAAAAGAAAACAATCACTTAGCAATGGCGATGATCAGTTACTCCACCATTGTGGTTGCTCTGCTTGCTTCTTTTATGATTTGCTCTGTTTCCGCCAATTTTCAACGAGACGTAGAGATAACTTGGGGAGACGGACGTGGACAGATCACAAACAACGGCGATCTTCTTACACTCTCTCTCGACAAAGCTTCAGGCTCAGGATTCCAATCCAAGAACGAATATTTGTTCGGTAAAATCGACATGCAGATCAAACTCGTTGCCGGAAACTCCGCTGGAACTGTCACCGCTTACTATTTGAAATCCCCTGGATCTACATGGGACGAGATTGACTTTGAGTTCTTGGGAAACCTAAGTGGTGATCCTTACACACTTCATACTAATGTCTTTACGCAAGGAAAAGGCGATAGAGAACAACAATTCAAACTCTGGTTCGATCCCACTAGTGATTTCCACACTTACTCTATCCTCTGGAACCCACAACGCATCATATTCTCCGTGGATGGAACTCCCATAAGAGAATTCAAGAACATGGAATCTCAAGGAACTCTGTTTCCTAAGAACCAGCCAATGAGAATGTACTCTAGTCTATGGAACGCTGAAGAATGGGCCACAAGGGGTGGTCTCGTCAAAACCGACTGGTCTAAAGCTCCCTTCACTGCTTCCTACCGCGGCTTCAACGAAGAAGCTTGCGTCGTGATCAACGGCCAGTCTTCATGCCCTAACGTGTCAGGACAAGGGAGTACTGGTTCGTGGTTGTCTCAGGAGCTAGACTCGACGGGTCAAGAACAGATGAGATGGGTACAGAATAACTACATGATTTACAATTACTGTACGGACGCTAAAAGGTTCCCTCAAGGTCTTCCACGCGAGTGCTTAGCTGCGTAAAGCTTTTAAACAAATGATCCAAAGCCATGAAAAGTAATACTATTCTTTGATTCATCTTATAAAGTATCTGATGTTTGGTTACATCTGTTTTTTATTTATTCTATGTAAGTATATTTGTATTCGAATATTGATCAATCACTTTACCAAAATAAAACATTTGAACGTACGATCAGAAAAGTTTAAGTCATAGACCTCAACGAAAAGTAAAAACG
CDS Sequence
Protein Sequence