Gene Details:

• Gene ID: AT4G25730
• Gene Symbol: AtTRM7b, TRM7b
• Gene Name: tRNA methyltransferase 7b
• Description: FtsJ-like methyltransferase family protein;(source:Araport11)
• TAIR Accession: locus:2117487
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT4G25730.1

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020038  — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0020137  — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)

Gene Ontology:

• GO:0031167  — involved in — rRNA methylation
• GO:0000463  — involved in — maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
• GO:0000466  — involved in — maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
• GO:0016435  — enables — rRNA (guanine) methyltransferase activity
• GO:0030687  — part of — preribosome, large subunit precursor
• GO:0005634  — located in — nucleus
• GO:0008650  — enables — rRNA (uridine-2-O-)-methyltransferase activity GO:0008650 4000 F transferase activity IBA none PANTHER:PTN000100393|SGD:S000000559 Communication:501741973 2021-04-02 AT4G25730 locus:2117487 AT4G25730 enables rRNA (guanine) methyltransferase activity GO:0016435 3996 F transferase activity IBA none PANTHER:PTN000100393|SGD:S000000559 Communication:501741973 2021-04-02 AT4G25730 locus:2117487 AT4G25730 enables rRNA (uridine-2-O-)-methyltransferase activity
• GO:0005730  — is active in — nucleolus
• GO:0032259  — acts upstream of or within — methylation
• GO:0003729  — enables — mRNA binding

Function-related keywords:

• shoot axis apex ,  leaf lamina base ,  shoot system ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  inflorescence flower pedicel ,  cotyledon ,  petiole ,  hypocotyl ,  leaf apex ,  collective leaf structure

Literature:

• Cell cycle-regulated gene expression in Arabidopsis.   DOI:  10.1074/jbc.M207570200 ;  PMID:  12169696
• Combinatorial microarray analysis revealing arabidopsis genes implicated in cytokinin responses through the His->Asp Phosphorelay circuitry.   DOI:  10.1093/pcp/pci033 ;  PMID:  15695462
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Identification of tRNA nucleoside modification genes critical for stress response and development in rice and Arabidopsis.   DOI:  10.1186/s12870-017-1206-0 ;  PMID:  29268705
• Salt hypersensitive mutant 9, a nucleolar APUM23 protein, is essential for salt sensitivity in association with the ABA signaling pathway in Arabidopsis.   DOI:  10.1186/s12870-018-1255-z ;  PMID:  29490615
• Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method.   DOI:  10.3390/biom10040661 ;  PMID:  32344669

Sequences: