AT4G25540

Gene Details

Gene ID: AT4G25540
Gene Symbol: ATMSH3, MSH3
Gene Name: homolog of DNA mismatch repair protein MSH3
Description: homolog of DNA mismatch repair protein MSH3;(source:Araport11)
TAIR Accession: locus:2131829
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Functional Descriptions

PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)

GO:0003690 — enables — double-stranded DNA binding
GO:0005515 — enables — protein binding
GO:0006312 — involved in — mitotic recombination
GO:0005634 — located in — nucleus
GO:0006298 — acts upstream of or within — mismatch repair
GO:0030983 — enables — mismatched DNA binding
GO:0006298 — involved in — mismatch repair
GO:0005634 — is active in — nucleus
GO:0003684 — enables — damaged DNA binding

Functional Keywords

Literature and News

Gene Resources

Sequences

cDNA Sequence

>AT4G25540.1
TCGTCACTTTGTTGTTCAGTGACAGTGATGGATTAGAGAGATTGGCAACCTAAGAAAGCGCGCGAAAATTGGCAACCCAAGTTCGCCATAGCCACGACCACGACCTTCCATTTCTCTTAAACGGAGGAGATTACGAATAAAGCAATTATGGGCAAGCAAAAGCAGCAGACGATTTCTCGTTTCTTCGCTCCCAAACCCAAATCCCCGACTCACGAACCGAATCCGGTAGCCGAATCATCAACACCGCCACCGAAGATATCCGCCACTGTATCCTTCTCTCCTTCCAAGCGTAAGCTTCTCTCCGACCACCTCGCCGCCGCGTCACCCAAAAAGCCTAAACTTTCTCCTCACACTCAAAACCCAGTACCCGATCCCAATTTACACCAAAGATTTCTCCAGAGATTTCTGGAACCCTCGCCGGAGGAATATGTTCCCGAAACGTCATCATCGAGGAAATACACACCATTGGAACAGCAAGTGGTGGAGCTAAAGAGCAAGTACCCAGATGTGGTTTTGATGGTGGAAGTTGGTTACAGGTACAGATTCTTCGGAGAAGACGCGGAGATCGCAGCACGCGTGTTGGGTATTTACGCTCATATGGATCACAATTTCATGACGGCGAGTGTGCCAACATTTCGATTGAATTTCCATGTGAGAAGACTGGTGAATGCAGGATACAAGATTGGTGTAGTGAAGCAGACTGAAACTGCAGCCATTAAGTCCCATGGTGCAAACCGGACCGGCCCTTTTTTCCGGGGACTGTCGGCGTTGTATACCAAAGCCACGCTTGAAGCGGCTGAGGATATAAGTGGTGGTTGTGGTGGTGAAGAAGGTTTTGGTTCACAGAGTAATTTCTTGGTTTGTGTTGTGGATGAGAGAGTTAAGTCGGAGACATTAGGCTGTGGTATTGAAATGAGTTTTGATGTTAGAGTCGGTGTTGTTGGCGTTGAAATTTCGACAGGTGAAGTTGTTTATGAAGAGTTCAATGATAATTTCATGAGAAGTGGATTAGAGGCTGTGATTTTGAGCTTGTCACCAGCTGAGCTGTTGCTTGGCCAGCCTCTTTCACAACAAACTGAGAAGTTTTTGGTGGCACATGCTGGACCTACCTCAAACGTTCGAGTGGAACGTGCCTCACTGGATTGTTTCAGCAATGGTAATGCAGTAGATGAGGTTATTTCATTATGTGAAAAAATCAGCGCAGGTAACTTAGAAGATGATAAAGAAATGAAGCTGGAGGCTGCTGAAAAAGGAATGTCTTGCTTGACAGTTCATACAATTATGAACATGCCACATCTGACTGTTCAAGCCCTCGCCCTAACGTTTTGCCATCTCAAACAGTTTGGATTTGAAAGGATCCTTTACCAAGGGGCCTCATTTCGCTCTTTGTCAAGTAACACAGAGATGACTCTCTCAGCCAATACTCTGCAACAGTTGGAGGTTGTGAAAAATAATTCAGATGGATCGGAATCTGGCTCCTTATTCCATAATATGAATCACACACTTACAGTATATGGTTCCAGGCTTCTTAGACACTGGGTGACTCATCCTCTATGCGATAGAAATTTGATATCTGCTCGGCTTGATGCTGTTTCTGAGATTTCTGCTTGCATGGGATCTCATAGTTCTTCCCAGCTCAGCAGTGAGTTGGTTGAAGAAGGTTCTGAGAGAGCAATTGTATCACCTGAGTTTTATCTCGTGCTCTCCTCAGTCTTGACAGCTATGTCTAGATCATCTGATATTCAACGTGGAATAACAAGAATCTTTCATCGGACTGCTAAAGCCACAGAGTTCATTGCAGTTATGGAAGCTATTTTACTTGCGGGGAAGCAAATTCAGCGGCTTGGCATAAAGCAAGACTCTGAAATGAGGAGTATGCAATCTGCAACTGTGCGATCTACTCTTTTGAGAAAATTGATTTCTGTTATTTCATCCCCTGTTGTGGTTGACAATGCCGGAAAACTTCTCTCTGCCCTAAATAAGGAAGCGGCTGTTCGAGGTGACTTGCTCGACATACTAATCACTTCCAGCGACCAATTTCCTGAGCTTGCTGAAGCTCGCCAAGCAGTTTTAGTCATCAGGGAAAAGCTGGATTCCTCGATAGCTTCATTTCGCAAGAAGCTCGCTATTCGAAATTTGGAATTTCTTCAAGTGTCGGGGATCACACATTTGATAGAGCTGCCCGTTGATTCCAAGGTCCCTATGAATTGGGTGAAAGTAAATAGCACCAAGAAGACTATTCGATATCATCCCCCAGAAATAGTAGCTGGCTTGGATGAGCTAGCTCTAGCAACTGAACATCTTGCCATTGTGAACCGAGCTTCGTGGGATAGTTTCCTCAAGAGTTTCAGTAGATACTACACAGATTTTAAGGCTGCCGTTCAAGCTCTTGCTGCACTGGACTGTTTGCACTCCCTTTCAACTCTATCTAGAAACAAGAACTATGTCCGTCCCGAGTTTGTGGATGACTGTGAACCAGTTGAGATAAACATACAGTCTGGTCGTCATCCTGTACTGGAGACTATATTACAAGATAACTTCGTCCCAAATGACACAATTTTGCATGCAGAAGGGGAATATTGCCAAATTATCACCGGACCTAACATGGGAGGAAAGAGCTGCTATATCCGTCAAGTTGCTTTAATTTCCATAATGGCTCAGGTTGGTTCCTTTGTACCAGCGTCATTCGCCAAGCTGCACGTGCTTGATGGTGTTTTCACTCGGATGGGTGCTTCAGACAGTATCCAGCATGGCAGAAGTACCTTTCTAGAAGAATTAAGTGAAGCGTCACACATAATCAGAACCTGTTCTTCTCGTTCGCTTGTTATATTAGATGAGCTTGGAAGAGGCACTAGCACACACGACGGTGTAGCCATTGCCTATGCAACATTACAGCATCTCCTAGCAGAAAAGAGATGTTTGGTTCTTTTTGTCACGCATTACCCTGAAATAGCTGAGATCAGTAACGGATTCCCAGGTTCTGTTGGGACATACCATGTCTCGTATCTGACATTGCAGAAGGATAAAGGCAGTTATGATCATGATGATGTGACCTACCTATATAAGCTTGTGCGTGGTCTTTGCAGCAGGAGCTTTGGTTTTAAGGTTGCTCAGCTTGCCCAGATACCTCCATCATGTATACGTCGAGCCATTTCAATGGCTGCAAAATTGGAAGCTGAGGTACGTGCAAGAGAGAGAAATACACGCATGGGAGAACCAGAAGGACATGAAGAACCGAGAGGCGCAGAAGAATCTATTTCGGCTCTAGGTGACTTGTTTGCAGACCTGAAATTTGCTCTCTCTGAAGAGGACCCTTGGAAAGCATTCGAGTTTTTAAAGCATGCTTGGAAGATTGCTGGCAAAATCAGACTAAAACCAACTTGTTCATTTTGATTTAATCTTAACATTATAGCAACTGCAAGGTCTTGATCATCTGTTAGTTGCGTACTAACTTATGTGTATTAGTATAACAAGAAAAGAGAATTAGAGAGATGGATTCTAATCCGGTGTTGCAGTACATCTTTTCTCCACCCGCAACCCTGTTTCTTTTCAGCTTGATTTCTAGTAGTTATTAGAATTCTGGAATGCATTTTTCACCTGATATAGTGAAGCATGATCTCCATCAATGTTGAATACGA

CDS Sequence

Protein Sequence