Gene Details:
- Gene ID: AT4G25450
- Gene Symbol: ABCB28, ATNAP8, NAP8
- Gene Name: ATP-binding cassette B28, ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 8, non-intrinsic ABC protein 8
- Description: non-intrinsic ABC protein 8;(source:Araport11)
- TAIR Accession: locus:2131809
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0009507 — located in — chloroplast
- GO:0090374 — involved in — oligopeptide export from mitochondrion
- GO:0015421 — enables — ABC-type oligopeptide transporter activity
- GO:0055085 — involved in — transmembrane transport
- GO:0009941 — located in — chloroplast envelope
- GO:0016887 — enables — ATP hydrolysis activity
- GO:0005743 — is active in — mitochondrial inner membrane
- GO:0042626 — enables — ATPase-coupled transmembrane transporter activity
- GO:0005829 — located in — cytosol
- GO:0022857 — enables — transmembrane transporter activity
- GO:0140359 — enables — ABC-type transporter activity
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- The Arabidopsis thaliana ABC protein superfamily, a complete inventory. DOI: 10.1074/jbc.M103104200 ; PMID: 11346655
- Multifunctionality of plant ABC transporters–more than just detoxifiers. DOI: 10.1007/s004250100661 ; PMID: 11855639
- Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. DOI: 10.1074/mcp.M300030-MCP200 ; PMID: 12766230
- Inventory and comparative analysis of rice and Arabidopsis ATP-binding cassette (ABC) systems. DOI: 10.1016/j.jmb.2004.07.093 ; PMID: 15381434
- HMA1, a new Cu-ATPase of the chloroplast envelope, is essential for growth under adverse light conditions. DOI: 10.1074/jbc.M508333200 ; PMID: 16282320
- Genome-wide analysis of ATP-binding cassette (ABC) proteins in a model legume plant, Lotus japonicus: comparison with Arabidopsis ABC protein family. DOI: 10.1093/dnares/dsl013 ; PMID: 17164256
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Plant ABC proteins–a unified nomenclature and updated inventory. DOI: 10.1016/j.tplants.2008.02.001 ; PMID: 18299247
- Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. DOI: 10.1074/mcp.M300030-MCP200 ; PMID: 12766230
- Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. DOI: 10.1021/pr034025j ; PMID: 12938931
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Sequences:
cDNA Sequence
- >AT4G25450.3
TGAAGTTCCAAAATTAGCCATTTTATACAGTGGTTAAGCTCGTTGGACCAATATCAATGGCGTCTGCAACGACTCTTCTCTTCCACCACGGTTCCACTCGAGTCCTCGTCGCTCGTAGACGGTGCCAAGCTTCAGTCCTTAGACCCTACGGCGGTTTAAAGCCCTTTCTTTCCTTCTGCAGCTTACCTAACTCCACTGCGCCGTTCCGGGATTCGTTGAGAGCAAAATCCGATGGATTGGCTCGGGCCTATGTTACCGGAGCGCCGCCTATCGTGGAAGAACCAGACCCAAAGATTGAAGAATCCAAATCTGAGGCTGAATCGAAGGATTTAATTAGTTGGGGGCTTCTGTGGAGCTTGATGAGCAAGCACAAGCTCAGGCTCAGTGTTTGCTTATTGACTCTCCTTGGATGCAGTACTTGCACTCTCTCTATGCCTGTTTTTTCTGATTCTTTGAAGTACTGATTGGGGTGAGACCGGAGCCTTTGTGGCGGCTGCTGAGCAAAATTGCTGTTTTGTACTCGTTGGAACCCATCTTTACTATTGCTTTTGTGACCAACATGACTGCTATCTGGGAAAACGTTATGGCAATATTAAGAGCTCAGATTTTCAGAAGGGTTTTGATCCAGAAGGCAGAGTTCTTCGACAAATACAAGGTTGGAGAGCTAACGGGGCTACTCACGTCTGATCTTGGTGCTCTGAATAGCATTGTGAATGATAACATCTCACGAGATCGTGGATTTAGGGCATTTACAGAGGTTTTTGGAACAATATGTATCCTATTTACTCTATCTCCTCAACTTGCACCTGTACTTGGTCTATTGATGCTAGCTGTGTCAGTTCTAGTTGCTGTGTACAAGAGATCGACTGTTCCTGTTTATAAATCGCATGGATTAGCTCAAGCAACAATGTCTGATTGTGTATCAGAAACGTTCTCTGCAATCCGAACTGTAAGATCATTCAGCGGCGAAAAACGTCAGATGTCTATCTTCGGTAGTCAGATTCTTGCTTACAAGCTTAGCGGCTTAAAGCTTGGTACTTTCAAGTCTATAAATGAATCTATAACAAGAGTTGCTGTTTATATTTCTCTGTTGGCTCTTTACTGTCTTGGGGGAAGCAAGGTGAAGACGGGTGAGCTCGCTGTTGGAACAGTTGTTTCGTTCATTGGATACACATTCACTCTAACATTTGCTGTCCAAGGGCTTGTAAACACGTTTGGAGATCTACGTGGGACTTTTGCTGCTATTGACAGGATCAATTCCATTTTAAACGCGGTGGACATAGATGAGGCTCTTGCCTACGGGTTAGAAAGAGATATACATACAAAGAAAGTCCAAGATGAAAACCTTAAATTGTTCTTGTCTGCTGGCCCAAATGTGAATATCCGTCACCTCGATAAGTACTACATGTCAAATCTGAAATCAACTAACAATCTACGTACCCTAACATGGGCTGGAGATGTCTGTCTTGATGATGTGCATTTTGCTTATCCTCTACGACCCGACGTGAAAGTTCTTGATGGGCTGAGTTTGACGTTGAATTCTGGTACTGTAACTGCTCTTGTTGGCTCTAGTGGTGCGGGAAAAAGTACTATTGTACAGTTATTGGCACGCTTCTATGAGCCAACACAAGGACGTATTACTGTGGGTGGAGAAGATGTGAGGATGTTTGACAAGAGTGAATGGGCTAAGGTTGTCTCAATTGTGAATCAGGAACCGGTTCTCTTTTCTCTCTCCGTGGCCGAGAATATTGCATATGGTCTCCCCAATGAGCATGTGTCCAAGGACGACATCATTAAGGCAGCCAAAGCTGCCAACGCTCATGATTTTATAATCTCACTTCCTCAGGGATACGATACACTGGTTGGTGAAAGAGGAGGCTTGCTTAGCGGAGGACAACGACAGAGAGTTGCCATAGCCCGATCTCTGCTGAAGAATGCCCCCATCTTGATTCTCGATGAGGCCACAAGTGCGCTGGATGCAGTGAGCGAGCGGTTAGTCCAGAGTGCGTTGAACCGTCTGATGAAAGACAGGACAACATTAGTCATCGCTCACAGACTGAGCACAGTTCAGAGCGCGAATCAGATCGCTGTGTGCTCTGATGGGAAGATCATAGAGCTTGGAACACATTCCGAATTGGTAGCGCAAAAGGGATCATATGCTTCACTTGTTGGCACTCAGAGACTAGCCTTTGAGTAATTTACCTTAACTCGGTGTAATTTGTAACAAATTACTACAAAATTACAAATGGTAGAATCTGGTTTTATATACAACTTTGATTAACAATAGTTTATAGACAGATCAAATTTTC - >AT4G25450.1
TGAAGTTCCAAAATTAGCCATTTTATACAGTGGTTAAGCTCGTTGGACCAATATCAATGGCGTCTGCAACGACTCTTCTCTTCCACCACGGTTCCACTCGAGTCCTCGTCGCTCGTAGACGGTGCCAAGCTTCAGTCCTTAGACCCTACGGCGGTTTAAAGCCCTTTCTTTCCTTCTGCAGCTTACCTAACTCCACTGCGCCGTTCCGGGATTCGTTGAGAGCAAAATCCGATGGATTGGCTCGGGCCTATGTTACCGGAGCGCCGCCTATCGTGGAAGAACCAGACCCAAAGATTGAAGAATCCAAATCTGAGGCTGAATCGAAGGATTTAATTAGTTGGGGGCTTCTGTGGAGCTTGATGAGCAAGCACAAGCTCAGGCTCAGTGTTTGCTTATTGACTCTCCTTGGATGCAGTACTTGCACTCTCTCTATGCCTGTTTTTTCTGATTCTTTGAAGTACTGATTGGGGTGAGACCGGAGCCTTTGTGGCGGCTGCTGAGCAAAATTGCTGTTTTGTACTCGTTGGAACCCATCTTTACTATTGCTTTTGTGACCAACATGACTGCTATCTGGGAAAACGTTATGGCAATATTAAGAGCTCAGATTTTCAGAAGGGTTTTGATCCAGAAGGCAGAGTTCTTCGACAAATACAAGGTTGGAGAGCTAACGGGGCTACTCACGTCTGATCTTGGTGCTCTGAATAGCATTGTGAATGATAACATCTCACGAGATCGTGGATTTAGGGCATTTACAGAGGTTTTTGGAACAATATGTATCCTATTTACTCTATCTCCTCAACTTGCACCTGTACTTGGTCTATTGATGCTAGCTGTGTCAGTTCTAGTTGCTGTGTACAAGAGATCGACTGTTCCTGTTTATAAATCGCATGGATTAGCTCAAGCAACAATGTCTGATTGTGTATCAGAAACGTTCTCTGCAATCCGAACTGTAAGATCATTCAGCGGCGAAAAACGTCAGATGTCTATCTTCGGTAGTCAGATTCTTGCTTACAAGCTTAGCGGCTTAAAGCTTGGTACTTTCAAGTCTATAAATGAATCTATAACAAGAGTTGCTGTTTATATTTCTCTGTTGGCTCTTTACTGTCTTGGGGGAAGCAAGGTGAAGACGGGTGAGCTCGCTGTTGGAACAGTTGTTTCGTTCATTGGATACACATTCACTCTAACATTTGCTGTCCAAGGGCTTGTAAACACGTTTGGAGATCTACGTGGGACTTTTGCTGCTATTGACAGGATCAATTCCATTTTAAACGCGGTGGACATAGATGAGGCTCTTGCCTACGGGTTAGAAAGAGATATACATACAAAGAAAGTCCAAGATGAAAACCTTAAATTGTTCTTGTCTGCTGGCCCAAATGTGAATATCCGTCACCTCGATAAGTACTACATGTCAAATCTGAAATCAACTAACAATCTACGTACCCTAACATGGGCTGGAGATGTCTGTCTTGATGATGTGCATTTTGCTTATCCTCTACGACCCGACGTGAAAGTTCTTGATGGGCTGAGTTTGACGTTGAATTCTGGTACTGTAACTGCTCTTGTTGGCTCTAGTGGTGCGGGAAAAAGTACTATTGTACAGTTATTGGCACGCTTCTATGAGCCAACACAAGGACGTATTACTGTGGGTGGAGAAGATGTGAGGATGTTTGACAAGAGTGAATGGGCTAAGGTTGTCTCAATTGTGAATCAGGAACCGGTTCTCTTTTCTCTCTCCGTGGCCGAGAATATTGCATATGGTCTCCCCAATGAGCATGTGTCCAAGGACGACATCATTAAGGCAGCCAAAGCTGCCAACGCTCATGATTTTATAATCTCACTTCCTCAGGGATACGATACACTGGTTGGTGAAAGAGGAGGCTTGCTTAGCGGAGGACAACGACAGAGAGTTGCCATAGCCCGATCTCTGCTGAAGAATGCCCCCATCTTGATTCTCGATGAGGCCACAAGTGCGCTGGATGCAGTGAGCGAGCGGTTAGTCCAGAGTGCGTTGAACCGTCTGATGAAAGACAGGACAACATTAGTCATCGCTCACAGACTGAGCACAGTTCAGAGCGCGAATCAGATCGCTGTGTGCTCTGATGGGAAGATCATAGAGCTTGGAACACATTCCGAATTGGTAGCGCAAAAGGGATCATATGCTTCACTTGTTGGCACTCAGAGACTAGCCTTTGAGTAATTTACCTTAACTCGGTGTAATTTGTAACAAATTACTACAAAATTACAAATGGTAGAATCTGGTTTTATATACAACTTTGATTAACAATAGTTTATAGACAGATCAAATTTTC - >AT4G25450.2
TGAAGTTCCAAAATTAGCCATTTTATACAGTGGTTAAGCTCGTTGGACCAATATCAATGGCGTCTGCAACGACTCTTCTCTTCCACCACGGTTCCACTCGAGTCCTCGTCGCTCGTAGACGGTGCCAAGCTTCAGTCCTTAGACCCTACGGCGGTTTAAAGCCCTTTCTTTCCTTCTGCAGCTTACCTAACTCCACTGCGCCGTTCCGGGATTCGTTGAGAGCAAAATCCGATGGATTGGCTCGGGCCTATGTTACCGGAGCGCCGCCTATCGTGGAAGAACCAGACCCAAAGATTGAAGAATCCAAATCTGAGGCTGAATCGAAGGATTTAATTAGTTGGGGGCTTCTGTGGAGCTTGATGAGCAAGCACAAGCTCAGGCTCAGTGTTTGCTTATTGACTCTCCTTGGATGCAGTACTTGCACTCTCTCTATGCCTGTTTTTTCTGATTCTTTGAAGTACTGATTGGGGTGAGACCGGAGCCTTTGTGGCGGCTGCTGAGCAAAATTGCTGTTTTGTACTCGTTGGAACCCATCTTTACTATTGCTTTTGTGACCAACATGACTGCTATCTGGGAAAACGTTATGGCAATATTAAGAGCTCAGATTTTCAGAAGGGTTTTGATCCAGAAGGCAGAGTTCTTCGACAAATACAAGGTTGGAGAGCTAACGGGGCTACTCACGTCTGATCTTGGTGCTCTGAATAGCATTGTGAATGATAACATCTCACGAGATCGTGGATTTAGGGCATTTACAGAGGTTTTTGGAACAATATGTATCCTATTTACTCTATCTCCTCAACTTGCACCTGTACTTGGTCTATTGATGCTAGCTGTGTCAGTTCTAGTTGCTGTGTACAAGAGATCGACTGTTCCTGTTTATAAATCGCATGGATTAGCTCAAGCAACAATGTCTGATTGTGTATCAGAAACGTTCTCTGCAATCCGAACTGTAAGATCATTCAGCGGCGAAAAACGTCAGATGTCTATCTTCGGTAGTCAGATTCTTGCTTACAAGCTTAGCGGCTTAAAGCTTGGTACTTTCAAGTCTATAAATGAATCTATAACAAGAGTTGCTGTTTATATTTCTCTGTTGGCTCTTTACTGTCTTGGGGGAAGCAAGGTGAAGACGGGTGAGCTCGCTGTTGGAACAGTTGTTTCGTTCATTGGATACACATTCACTCTAACATTTGCTGTCCAAGGGCTTGTAAACACGTTTGGAGATCTACGTGGGACTTTTGCTGCTATTGACAGGATCAATTCCATTTTAAACGCGGTGGACATAGATGAGGCTCTTGCCTACGGGTTAGAAAGAGATATACATACAAAGAAAGTCCAAGATGAAAACCTTAAATTGTTCTTGTCTGCTGGCCCAAATGTGAATATCCGTCACCTCGATAAGTACTACATGTCAAATCTGAAATCAACTAACAATCTACGTACCCTAACATGGGCTGGAGATGTCTGTCTTGATGATGTGCATTTTGCTTATCCTCTACGACCCGACGTGAAAGTTCTTGATGGGCTGAGTTTGACGTTGAATTCTGGTACTGTAACTGCTCTTGTTGGCTCTAGTGGTGCGGGAAAAAGTACTATTGTACAGTTATTGGCACGCTTCTATGAGCCAACACAAGGACGTATTACTGTGGGTGGAGAAGATGTGAGGATGTTTGACAAGAGTGAATGGGCTAAGGTTGTCTCAATTGTGAATCAGGAACCGGTTCTCTTTTCTCTCTCCGTGGCCGAGAATATTGCATATGGTCTCCCCAATGAGCATGTGTCCAAGGACGACATCATTAAGGCAGCCAAAGCTGCCAACGCTCATGATTTTATAATCTCACTTCCTCAGGGATACGATACACTGGTTGGTGAAAGAGGAGGCTTGCTTAGCGGAGGACAACGACAGAGAGTTGCCATAGCCCGATCTCTGCTGAAGAATGCCCCCATCTTGATTCTCGATGAGGCCACAAGTGCGCTGGATGCAGTGAGCGAGCGGTTAGTCCAGAGTGCGTTGAACCGTCTGATGAAAGACAGGACAACATTAGTCATCGCTCACAGACTGAGCACAGTTCAGAGCGCGAATCAGATCGCTGTGTGCTCTGATGGGAAGATCATAGAGCTTGGAACACATTCCGAATTGGTAGCGCAAAAGGGATCATATGCTTCACTTGTTGGCACTCAGAGACTAGCCTTTGAGTAATTTACCTTAACTCGGTGTAATTTGTAACAAATTACTACAAAATTACAAATGGTAGAATCTGGTTTTATATACAACTTTGATTAACAATAGTTTATAGACAGATCAAATTTTC
CDS Sequence
Protein Sequence