Information report for AT4G25440
Gene Details
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Functional Descriptions
- PO:0005352 — xylem — portion of xylem tissue (exact), xilema (Spanish, exact), 木質部 (Japanese, exact)
- GO:0005634 — located in — nucleus
- GO:0050793 — acts upstream of or within — regulation of developmental process
Functional Keywords
Literature and News
- The xylem and phloem transcriptomes from secondary tissues of the Arabidopsis root-hypocotyl. DOI: 10.1104/pp.105.060202 ; PMID: 15923329
- Calmodulin interacts with and regulates the RNA-binding activity of an Arabidopsis polyadenylation factor subunit. DOI: 10.1104/pp.105.070672 ; PMID: 16500995
- Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice. DOI: 10.1186/1471-2164-9-44 ; PMID: 18221561
- The xylem and phloem transcriptomes from secondary tissues of the Arabidopsis root-hypocotyl. DOI: 10.1104/pp.105.060202 ; PMID: 15923329
Gene Resources
- UniProt: A0A654FSW0
- EMBL: CACRSJ010000109
- AlphaFoldDB: A0A654FSW0
- EnsemblPlants: AT4G25440.1, AT4G25440.2, AT4G25440.3
- Gramene: AT4G25440.1, AT4G25440.2, AT4G25440.3
- KEGG: ath:AT4G25440
- Orthologous matrix: MNGGNTR
- ExpressionAtlas: AT4G25440
- InterPro: IPR000571, IPR001680, IPR015943
- PANTHER: PTHR44489, PTHR44489:SF18
- SUPFAM: SSF50978, SSF90229
- PROSITE: PS50082, PS50103, PS50294
- Gene3D: 2.130.10.10, 4.10.1000.10
- SWISS-MODEL: A0A654FSW0
Sequences
cDNA Sequence
- >AT4G25440.1
GCCGCTTGACATCTTCTTCCAATTTTGATTTATCAAAGAAAACTCCTTTGTGAGAGATTATTTATGTACTCTTGATTCAGAGAGGATAATCCAATTCCGAGTTTTCTGAGTCGTAATTTAGAGAGAATCCAATTCGATGGATTTAGATATGAACGGAGGAAACAAGAGAGTCTTTCAAAGACTGGGCGGTGGCTCTAATCGGCCGACGACGGACTCAAATCAGAAGGTTTGTTTCCACTGGCGAGCTGGCCGGTGCAATCGTTACCCATGCCCTTACCTGCATAGAGAATTGCCGGGTCCGGGTTCGGGTCCAGTAGCAGCTTCTTCAAATAAAAGGGTCGCTGATGAATCTGGGTTTGCGGGTCCGAGTCACCGGAGAGGGCCTGGGTTCAGCGGGACTGCTAATAACTGGGGAAGATTTGGTGGGAACAGAACGGTGACCAAGACGGAGAAACTTTGCAAATTCTGGGTTGATGGAAATTGCCCTTATGGTGATAAATGTAGATACTTGCATTGCTGGAGCAAAGGAGATAGTTTCTCCTTGTTGACGCAGCTTGACGGGCATCAGAAGGTTGTTACTGGGATTGCTCTGCCTTCAGGATCAGATAAGCTTTACACGGCGAGTAAAGATGAAACTGTGCGAATATGGGATTGTGCTTCTGGACAGTGTACAGGTGTACTCAATCTTGGTGGGGAAGTTGGCTGCATCATTAGTGAAGGTCCCTGGCTATTGGTTGGCATGCCAAATCTTGTTAAGGCGTGGAATATCCAAAACAATGCAGACCTGAGCCTCAATGGACCTGTTGGCCAAGTATATTCATTGGTTGTGGGTACTGATCTATTGTTCGCTGGCACACAAGATGGCTCTATTTTGGTTTGGAGATACAATAGCACCACTAGCTGTTTTGATCCAGCTGCATCACTATTGGGTCACACGCTTGCAGTTGTCTCTTTATATGTTGGGGCAAACAGACTCTATTCTGGTGCCATGGACAATTCTATAAAAGTTTGGAGCCTGGATAATCTGCAGTGTATTCAAACGCTTACAGAGCATACATCAGTTGTTATGTCTCTCATTTGCTGGGATCAGTTTCTTCTGTCATGTTCATTGGACAATACCGTCAAGATATGGGCTGCTACTGAAGGTGGAAACTTAGAAGTGACATATACTCACAAAGAAGAATACGGCGTGCTAGCTCTCTGTGGCGTCCATGATGCAGAAGCCAAGCCAGTATTGCTATGTTCGTGCAATGACAATTCGTTGCACCTCTATGATTTGCCATCGTTTACGGAAAGGGGCAAAATTTTAGCTAAGCAAGAGATTCGGTCAATCCAGATAGGTCCCGGGGGCATATTTTTCACCGGTGATGGAAGTGGTCAAGTTAAAGTATGGAAGTGGTCTACTGAGTCGACCCCTATTTTGTCTTGAGGCGCAAAACAGAGCCCTAGTTCTTCACCTTTGTCAAATCTCTTCTTCTCGGAGTGTCAATAGTTCTTGTTTGTTTTGTTGTTCGAGAGATTGTAAGTAGCATCAAGGCATCTGTCTCTCTGGCTCCATTAAGTCTCTGCAGTTAAGACAGACGGCCGCAGAGAAGATTATGGACCACTGATTGTATCTACTATTATATTGATTTGATGTCAGAGCAGAGACATGGTCTGATCAGTTCCAGAGACGCGTATGGATCTGCCCACGTTGGTTGCAGACTTACTGTTCTTACTTCTTAGGCATAAGAAACTTTTGTCCCTCTTTGGTCAACATTCTTGTCATGTAATTTATGGCATAGATCTTTGTAGTCATGTTTCAGTGTAATAAAAGAGATGATTTATCATAAAGAGAATTTCTTAC - >AT4G25440.3
GCCGCTTGACATCTTCTTCCAATTTTGATTTATCAAAGAAAACTCCTTTGTGAGAGATTATTTATGTACTCTTGATTCAGAGAGGATAATCCAATTCCGAGTTTTCTGAGTCGTAATTTAGAGAGAATCCAATTCGATGGATTTAGATATGAACGGAGGAAACAAGAGAGTCTTTCAAAGACTGGGCGGTGGCTCTAATCGGCCGACGACGGACTCAAATCAGAAGGTTTGTTTCCACTGGCGAGCTGGCCGGTGCAATCGTTACCCATGCCCTTACCTGCATAGAGAATTGCCGGGTCCGGGTTCGGGTCCAGTAGCAGCTTCTTCAAATAAAAGGGTCGCTGATGAATCTGGGTTTGCGGGTCCGAGTCACCGGAGAGGGCCTGGGTTCAGCGGGACTGCTAATAACTGGGGAAGATTTGGTGGGAACAGAACGGTGACCAAGACGGAGAAACTTTGCAAATTCTGGGTTGATGGAAATTGCCCTTATGGTGATAAATGTAGATACTTGCATTGCTGGAGCAAAGGAGATAGTTTCTCCTTGTTGACGCAGCTTGACGGGCATCAGAAGGTTGTTACTGGGATTGCTCTGCCTTCAGGATCAGATAAGCTTTACACGGCGAGTAAAGATGAAACTGTGCGAATATGGGATTGTGCTTCTGGACAGTGTACAGGTGTACTCAATCTTGGTGGGGAAGTTGGCTGCATCATTAGTGAAGGTCCCTGGCTATTGGTTGGCATGCCAAATCTTGTTAAGGCGTGGAATATCCAAAACAATGCAGACCTGAGCCTCAATGGACCTGTTGGCCAAGTATATTCATTGGTTGTGGGTACTGATCTATTGTTCGCTGGCACACAAGATGGCTCTATTTTGGTTTGGAGATACAATAGCACCACTAGCTGTTTTGATCCAGCTGCATCACTATTGGGTCACACGCTTGCAGTTGTCTCTTTATATGTTGGGGCAAACAGACTCTATTCTGGTGCCATGGACAATTCTATAAAAGTTTGGAGCCTGGATAATCTGCAGTGTATTCAAACGCTTACAGAGCATACATCAGTTGTTATGTCTCTCATTTGCTGGGATCAGTTTCTTCTGTCATGTTCATTGGACAATACCGTCAAGATATGGGCTGCTACTGAAGGTGGAAACTTAGAAGTGACATATACTCACAAAGAAGAATACGGCGTGCTAGCTCTCTGTGGCGTCCATGATGCAGAAGCCAAGCCAGTATTGCTATGTTCGTGCAATGACAATTCGTTGCACCTCTATGATTTGCCATCGTTTACGGAAAGGGGCAAAATTTTAGCTAAGCAAGAGATTCGGTCAATCCAGATAGGTCCCGGGGGCATATTTTTCACCGGTGATGGAAGTGGTCAAGTTAAAGTATGGAAGTGGTCTACTGAGTCGACCCCTATTTTGTCTTGAGGCGCAAAACAGAGCCCTAGTTCTTCACCTTTGTCAAATCTCTTCTTCTCGGAGTGTCAATAGTTCTTGTTTGTTTTGTTGTTCGAGAGATTGTAAGTAGCATCAAGGCATCTGTCTCTCTGGCTCCATTAAGTCTCTGCAGTTAAGACAGACGGCCGCAGAGAAGATTATGGACCACTGATTGTATCTACTATTATATTGATTTGATGTCAGAGCAGAGACATGGTCTGATCAGTTCCAGAGACGCGTATGGATCTGCCCACGTTGGTTGCAGACTTACTGTTCTTACTTCTTAGGCATAAGAAACTTTTGTCCCTCTTTGGTCAACATTCTTGTCATGTAATTTATGGCATAGATCTTTGTAGTCATGTTTCAGTGTAATAAAAGAGATGATTTATCATAAAGAGAATTTCTTAC - >AT4G25440.2
GCCGCTTGACATCTTCTTCCAATTTTGATTTATCAAAGAAAACTCCTTTGTGAGAGATTATTTATGTACTCTTGATTCAGAGAGGATAATCCAATTCCGAGTTTTCTGAGTCGTAATTTAGAGAGAATCCAATTCGATGGATTTAGATATGAACGGAGGAAACAAGAGAGTCTTTCAAAGACTGGGCGGTGGCTCTAATCGGCCGACGACGGACTCAAATCAGAAGGTTTGTTTCCACTGGCGAGCTGGCCGGTGCAATCGTTACCCATGCCCTTACCTGCATAGAGAATTGCCGGGTCCGGGTTCGGGTCCAGTAGCAGCTTCTTCAAATAAAAGGGTCGCTGATGAATCTGGGTTTGCGGGTCCGAGTCACCGGAGAGGGCCTGGGTTCAGCGGGACTGCTAATAACTGGGGAAGATTTGGTGGGAACAGAACGGTGACCAAGACGGAGAAACTTTGCAAATTCTGGGTTGATGGAAATTGCCCTTATGGTGATAAATGTAGATACTTGCATTGCTGGAGCAAAGGAGATAGTTTCTCCTTGTTGACGCAGCTTGACGGGCATCAGAAGGTTGTTACTGGGATTGCTCTGCCTTCAGGATCAGATAAGCTTTACACGGCGAGTAAAGATGAAACTGTGCGAATATGGGATTGTGCTTCTGGACAGTGTACAGGTGTACTCAATCTTGGTGGGGAAGTTGGCTGCATCATTAGTGAAGGTCCCTGGCTATTGGTTGGCATGCCAAATCTTGTTAAGGCGTGGAATATCCAAAACAATGCAGACCTGAGCCTCAATGGACCTGTTGGCCAAGTATATTCATTGGTTGTGGGTACTGATCTATTGTTCGCTGGCACACAAGATGGCTCTATTTTGGTTTGGAGATACAATAGCACCACTAGCTGTTTTGATCCAGCTGCATCACTATTGGGTCACACGCTTGCAGTTGTCTCTTTATATGTTGGGGCAAACAGACTCTATTCTGGTGCCATGGACAATTCTATAAAAGTTTGGAGCCTGGATAATCTGCAGTGTATTCAAACGCTTACAGAGCATACATCAGTTGTTATGTCTCTCATTTGCTGGGATCAGTTTCTTCTGTCATGTTCATTGGACAATACCGTCAAGATATGGGCTGCTACTGAAGGTGGAAACTTAGAAGTGACATATACTCACAAAGAAGAATACGGCGTGCTAGCTCTCTGTGGCGTCCATGATGCAGAAGCCAAGCCAGTATTGCTATGTTCGTGCAATGACAATTCGTTGCACCTCTATGATTTGCCATCGTTTACGGAAAGGGGCAAAATTTTAGCTAAGCAAGAGATTCGGTCAATCCAGATAGGTCCCGGGGGCATATTTTTCACCGGTGATGGAAGTGGTCAAGTTAAAGTATGGAAGTGGTCTACTGAGTCGACCCCTATTTTGTCTTGAGGCGCAAAACAGAGCCCTAGTTCTTCACCTTTGTCAAATCTCTTCTTCTCGGAGTGTCAATAGTTCTTGTTTGTTTTGTTGTTCGAGAGATTGTAAGTAGCATCAAGGCATCTGTCTCTCTGGCTCCATTAAGTCTCTGCAGTTAAGACAGACGGCCGCAGAGAAGATTATGGACCACTGATTGTATCTACTATTATATTGATTTGATGTCAGAGCAGAGACATGGTCTGATCAGTTCCAGAGACGCGTATGGATCTGCCCACGTTGGTTGCAGACTTACTGTTCTTACTTCTTAGGCATAAGAAACTTTTGTCCCTCTTTGGTCAACATTCTTGTCATGTAATTTATGGCATAGATCTTTGTAGTCATGTTTCAGTGTAATAAAAGAGATGATTTATCATAAAGAGAATTTCTTAC
CDS Sequence
Protein Sequence