Gene Details:

  • Gene ID: AT4G25350
  • Gene Symbol: SHB1
  • Gene Name: SHORT HYPOCOTYL UNDER BLUE1
  • Description: EXS (ERD1/XPR1/SYG1) family protein;(source:Araport11)
  • TAIR Accession: locus:2138038
  • Genome: Araport11_genome_release
  • Species: Arabidopsis thaliana

Transcripts:

Plant Ontology Annotations:

  • PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
  • PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
  • PO:0009089  — endosperm — albumen (exact), endosperma (Spanish, exact), 内胚乳、胚乳 (Japanese, exact)

Gene Ontology:

  • GO:0005886  — located in — plasma membrane
  • GO:0005737  — is active in — cytoplasm
  • GO:0005829  — located in — cytosol
  • GO:0005802  — is active in — trans-Golgi network
  • GO:0005634  — located in — nucleus
  • GO:0005794  — is active in — Golgi apparatus
  • GO:0010468  — acts upstream of or within — regulation of gene expression
  • GO:0016036  — involved in — cellular response to phosphate starvation
  • GO:0015114  — enables — phosphate ion transmembrane transporter activity
  • GO:0080113  — acts upstream of or within — regulation of seed growth
  • GO:0010017  — acts upstream of or within — red or far-red light signaling pathway
  • GO:0006817  — involved in — phosphate ion transport
  • GO:0000822  — enables — inositol hexakisphosphate binding
  • GO:0005886  — is active in — plasma membrane
  • GO:0009960  — acts upstream of or within — endosperm development
  • GO:0080050  — acts upstream of or within — regulation of seed development
  • GO:0045793  — acts upstream of or within — positive regulation of cell size

Germplasm Phenotype:

  • CS860810  — Reduced seed size; short hypocotyl under blue light; late flowering under both long and short days.
  • SALK_128406  — shb1 mutant shows a mild phenotype of small seed and has no obvious phenotype of adult plant. shb1 also has a short hypocotyl under blue light and a late flowering phenotype under both long and short days.
  • shb1-D  — long-hypocotyl under red, far-red, and blue light conditions. Mutantion affects pigment accumulation and CHLOROPHYLL a/b BINDING PROTEIN3 or CHALCONE SYNTHASE expression. Promotes phyA degradation under far-red light.

Literature:

Sequences:

cDNA Sequence
  • >AT4G25350.1
    CTCAAGACCTGGTCTACCTCTCTAGAAAAACTTTCAGCATCACTCAAAACCCAAAAGTCAAAAAGTCACATTCTTCTTTCCAACTTTTGTTCCAAAGACAGAGAGAGGCCAAGATTCATAATTTGAGATTCTGACTGTAGACTTCGAGCAAGAAAAAAAAAGATCTGAAGGTTGAAGAATCATGAGGTTTGGGAAAGAGTTTGTGTCTCAGATGATCCCAGAATGGCAAGAAGCTTATATAGATTACGCTTACCTCAAAACCATTCTTCAAGACATCCAAGCTTCCCGGAATAGGTCAGATTCCAATAACCAGAGCAGTACTCCTTCCTTCGCACGTAACCTAACCAGACGGTACAACCGCGACGCCTTGGTCTCTGAGAATCACGACATTGTGGTCAACACTGTGACACGGCTCGAAGAAGGGCTCGAGACGGCGGCTTACGAGACTACGTTTTTAAAGGCCGGAGAAGCAGGTGGCGACTTTGAGGTTACCTTTTTTAGAACCCTAGATCGAGAATTCAACAAGGTAAATAACTTTTACAGGCTGAAAGTGGAGACAGCTAGAACTGAGGCTCTGGCTCTGAACAAACAAATGGATGCTTTGATTGCTTTCAGACACAAAGTCATGGATCAGAATCAGAAGAACCCTTCTGTCTTTGATTCAGTTTCAGAAGACATCAATGGCTCAGCTTCTGAGGTTGGATCATCTTCAAAGTGTACAGAACACAATGTGGCGTTAGCTGATCTTATGAGGAACGAAGATACATCGAATGAGAGTATTCTTGAGCGCATCAGGATGAACAAAACTCGAGAAATAACTCCTCTGTCCGCAATTAAAACTATACTCAAGGTCCATAAGCAGGACGAGCTCAAATTCACAAGAGATAATCTCAAGGAAGTGGAAAAGCGACTTCAGGTAGCGTTCATTGAGTTTTATCAGAAGCTTCGACATCTTAAAAACTACAGCTTCTTGAACGCTTCCGCTGTTTCCAAGATCATGAAGAAGTATGATAAGATAGCCAAAAGAAATGCTGCGAAACTGTATATGGAGATGGTCGATAAATCTTTCCTCAGTAGCTCCGAAGAAGTTCATAAGTTGTTGCTAAAGGTTGAATCTATTTTCATTGAACATTTCTCCAATTCAAATCGGAGGGAAGGGATGAGCCATTTAAGACCAAAAATAAATAAAGAACGTCATCTTATAACGTTTTCCACCGGCTTCTTTTTCGGCTGTGGTATTTCTCTCATTGTAGCTCTGGGTTTGATCATCCATGCTCGTAATATCATGGGTACACCGGGACAAAGAACTTATATGGAAACAATGTTCCCTCTTTACAGGTTTTTTGGGTTTGTAGTTTTGCACATGGACGTGTACGCTGCTAATATCTACTTCTGGAGGCGATACCGTGTGAATTACTCCTTCATCTTTGGATTCAAACAAGGCACTGAACTTGGTTATAGACATGTTCTACTTCTCAGCTTTGGTCTTGGTACACTTTCTTTATGTGCTGTCTTATTAAACCTTGACATGGAAATGGATGCTCAAACAAAAGATTACAGATTAGTCACCGAACTTATCCCCCTCTTTCTTCTCGTATTAGTGATTATCATTGTTCTCTGCCCCTTTAACATTTTGTATCGGTCAAGCCGATTCTTCTTCCTCTCGGTTCTGTTCCGCTGCATTGCTGCACCATTTTACGCGGTGCATCTTCCGGACTTTTTCTTGGGAGATCAACTAACAAGCCAGGTTCAAGCACTGAGGAGTCTAGAGTTCTACATATGCTACTATGGTTTTGGAGATTTCAGATATAGACGACGAAACACCTGCACATCAAATATTGGATTCAGAACATTCTACTTCATCGTCGCCGTTATACCTTACTGGTTACGGTTTCTTCAGTGCATCCGAAGAATGGTGGAAGACAGAGATCTGAGTCATGGCTACAATGGCATCAAATACCTTTTGACCATCGTTGCTGCTTCTCTTAGAACAGCTTATACTCTAAACCGAGGAAGCAACTGGAATATCACAGCTTGGGTTTTCTCAGGAGTTGCAACGTTTTACGGAACTTACTGGGACATTGTTCTTGACTGGGGATTGCTTCAAAGAGGATGTAAGAATAGTTTCTTGAGAGACAAGCTTCTTGTTCCTCACAAAACCGTGTACTACGCTGCAATGGTCCTGAATGTTTTGTTGAGGTTAGTGTGGTTGCAAACAGTTTTGGATCTGAAATTCTCTTTCTTGCATAGAGAAACTATGGTCGCGCTTATGGCTTGCCTTGAGATCATACGCAGAGGTATCTGGAACTTCTTTAGGCTGGAGAATGAGCATTTGAACAACGTTGGGAGATACAGGGCGTTCAAAACTGTCCCGTTACCGTTCAACTACGAAGAAGATGGAGATCATCATAACAATTAGCTTAACAAGAAAATACTTGGTTTCACAAAATTACCTAAACAACAACTAAACTTTTCACCGCTGTTCCGGTATACAACTGTAACGATCGAGCTTTGCCTCTCCGCTGTATTCTTCAGAGAGCCAACTCGAGGCTGGCTCACTCTCAGGGTCAGACCTAAGCGATGGTAGAATTATGGAGAAATCAAGTGGAAATCTCTTCGTTCCTTGGTAACAAGAGATACAAACACTTAACTAACTTGGTTACATACAACAAAAAGACATTACTTTGTACACTTACTTCAGATTTTGACAAGAAAGATAGAAACTCACGTCATTGTACAGTGTGTTTAGGTCTCAATATTGTATTGTTTTGTTGAAAGATAGGTCTCATATTGTTTTATTTAAAACAAAATTTCTGAATTTGCGTTTACATGAGAG
CDS Sequence
Protein Sequence