Gene Details:

• Gene ID: AT4G25240
• Gene Symbol: SKS1
• Gene Name: SKU5 similar 1
• Description: SKU5 similar 1;(source:Araport11)
• TAIR Accession: locus:2122689
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT4G25240.1     AT4G25240.2

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)

Gene Ontology:

• GO:0005886  — located in — plasma membrane
• GO:0005829  — located in — cytosol
• GO:0005576  — located in — extracellular region
• GO:0016020  — located in — membrane
• GO:0016491  — enables — oxidoreductase activity
• GO:0005507  — enables — copper ion binding
• GO:0009506  — located in — plasmodesma

Germplasm Phenotype:

• sks1,sks3,sku5  — Abnormal root development. Root cell wall defects/irregularly shaped cell walls.

Function-related keywords:

• shoot axis apex ,  shoot system ,  plant embryo ,  vascular leaf ,  sepal ,  flower ,  inflorescence flower pedicel ,  hypocotyl ,  collective leaf structure

Literature:

• Prediction of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A genomic analysis.   DOI:  10.1104/pp.010884 ;  PMID:  12068095
• The Arabidopsis SKU5 gene encodes an extracellular glycosyl phosphatidylinositol-anchored glycoprotein involved in directional root growth.   DOI:  10.1105/tpc.002360 ;  PMID:  12119380
• Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis.   DOI:  10.1104/pp.103.021170 ;  PMID:  12805588
• Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis.   DOI:  10.1104/pp.103.034736 ;  PMID:  15047898
• Analysis of detergent-resistant membranes in Arabidopsis. Evidence for plasma membrane lipid rafts.   DOI:  10.1104/pp.104.053041 ;  PMID:  15618420
• SKS6, a multicopper oxidase-like gene, participates in cotyledon vascular patterning during Arabidopsis thaliana development.   DOI:  10.1007/s00425-005-0012-3 ;  PMID:  15986216
• A gradient of auxin and auxin-dependent transcription precedes tropic growth responses.   DOI:  10.1073/pnas.0507127103 ;  PMID:  16371470
• Mapping the Arabidopsis organelle proteome.   DOI:  10.1073/pnas.0506958103 ;  PMID:  16618929
• Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis.   DOI:  10.1104/pp.103.021170 ;  PMID:  12805588
• Mapping the Arabidopsis organelle proteome.   DOI:  10.1073/pnas.0506958103 ;  PMID:  16618929
• Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis.   DOI:  10.1074/mcp.M600429-MCP200 ;  PMID:  17317660
• A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome.   DOI:  10.1074/mcp.M700099-MCP200 ;  PMID:  17644812

Sequences: