Gene Details:
- Gene ID: AT4G25160
- Gene Symbol: PUB35
- Gene Name:
- Description: U-box domain-containing protein kinase family protein;(source:Araport11)
- TAIR Accession: locus:2117343
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0000256 — root hair cell — célula del pelo de la raíz (Spanish, exact), 根毛細胞 (Japanese, exact)
- PO:0000262 — trichoblast — tricoblasto (Spanish, exact), 根毛形成細胞、トリコブラスト (Japanese, exact), hair cell (related)
Gene Ontology:
- GO:0006468 — involved in — protein phosphorylation
- GO:0004842 — enables — ubiquitin-protein transferase activity
- GO:0005634 — located in — nucleus
- GO:0048364 — acts upstream of or within — root development
Function-related keywords:
- shoot axis apex , plant embryo , sepal , flower , inflorescence flower pedicel , collective leaf structure , root hair cell , trichoblast
Literature:
- Arabidopsis proteins containing similarity to the universal stress protein domain of bacteria. DOI: 10.1104/pp.102.016006 ; PMID: 12644671
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Genome-wide expression profiling Arabidopsis at the stage of Golovinomyces cichoracearum haustorium formation. DOI: 10.1104/pp.107.111286 ; PMID: 18218973
- A gene regulatory network for root epidermis cell differentiation in Arabidopsis. DOI: 10.1371/journal.pgen.1002446 ; PMID: 22253603
- Differentiating phosphate-dependent and phosphate-independent systemic phosphate-starvation response networks in Arabidopsis thaliana through the application of phosphite. DOI: 10.1093/jxb/erv025 ; PMID: 25697796
- SINAT E3 Ubiquitin Ligases Mediate FREE1 and VPS23A Degradation to Modulate Abscisic Acid Signaling. DOI: 10.1105/tpc.20.00267 ; PMID: 32753431
- News from the PUB: plant U-box type E3 ubiquitin ligases. DOI: 10.1093/jxb/erx411 ; PMID: 29237060
Sequences:
cDNA Sequence
- >AT4G25160.1
GTCAAGGCCTAAGGTTGGAGAAAACTTCTTTCTTTTAGAACACACTCTCCTTCTGTCACTCTGATAATGAAGAAAATTCAGGCGAGAGAACAAAAGAGTATATACCCAGGACTGATCCTCCTTTGACCATTAACATGACCAACTTGTCTCATTTTCTTATTATTTTTGATGCTTCTTTTCAAATCTTTTTTAGATTCTCTGGTTATAAGAACCCATTGTTTGTATCTGAGATTAGCAGCACCAACGTGGGTCTTCATCTTCTTCTTCTGCTGCTCTCTTTATTTTCTGAAATTGATTGCTCTGTGAAATGGAAGCTTCCACCATTTCTTCTCTCAATTTTTGTATTGGGTTTGACTAAAGTCGCATCCTTTATTTACCAGGGTCAATAGAAACAAGAACACAAAAGATTAACAATGAGTAGATCACCAGACAAGCTTGCTCTTCCTCCTCCTCCTCCTCCTCCCCCATCTCGTACCGTCGTTGTGGCTCTAAGTGGGAGCAGTAAAAGCAAATATGTAGTTACATGGGCGATCGAAAAATTTGCTACTGAAGGAAATGTTGGCTTCAAGCTGCTTCACATCCATCCAATGATTACTTCTGTACCTACACCAATGGGAAATGCAATCCCGATTTCCGAGGTACGAGATGATGTAGTAACTGCATATAGACAGGAAATACTGTGGCAGTCTGAAGAAATGCTTAAACCTTACACAAAACTGTTCGTGCGGAGAAAGGTTGCAGTAGAAGTTCTTGTGATCGAATCAGATAATGTGGCAGCCGCAATAGCTGAAGAAGTGACTCGGGATTCAATAGACAGAATTGTCATTGGAGGCTCATCCCGTAGTTTTTTCTCAAGGAAAGCTGATATTTGCTCGGTGATATCAGCTTTGATGCCAAACTTTTGTACAGTCTATGTTGTTTCAAAAGGTAAATTGTCATGCGTCCGACCATCAGACTCAGACGGAAATGCTACTATAAGAGAAGATGGTAGTGAGAGAACAAATTCTTCAAGCGGTTCTTCTGGTCCCACCTCAGATTCATCAGATGTAATGTCAAGTGCGCATGACTCTCAATCTCGTCCTCTATCCCTTCCGGTCAGGAGAATGCAACATTTCCCTGCAATTGCAGGACAGGCATCAGTTCCAATGGAAACGAGTTCTGTTGGCTCGGATGAAACCAGGTGCATGTCTTTGGATGCAGAGGAAGCTAGAGATGTTTCAAGTATCAATAGAAGCAGCACAGATACTACATCACGTTGGACTCCTCGGCGTAGAGATTATGAGGAGAGAAAAGAAGCTATGAGTTCTTCTTCGAGCAACCGTGAATACGGGAATTTTGGTACTAGGTTTAGTTGGAGTGGCATGGGTGTCGATACTACACACTCTCGGGCTTCTCAACAAGCTTCCAACATGTCTGATGCTCTAAGTGAACAATCCTATACAGACAACCAGGTAAACCTAAACTTTGAGGTTGAGAAGTTGAGAGCTGAGCTTAGACACGTTCAAGAAATGTATGCTGTGGCTCAAACCGAAACCTTTGATGCTTCTCGAAAGCTTGGTGAACTTAACCAACGTCGGTTAGAAGAAGCCATAAAGCTTGAAGAGCTAAAGCTGAAGGAGTATGAAGCTCGAGAGTTAGCAGAAAAGGAAAAGCAGAATTTTGAGAAGGCAAGGAGAGATGCAGAGAGCATGAGAGAAAGAGCAGAGAGAGAAATTGCGCAGAGAAGAGAAGCCGAAAGGAAATCCGCACGTGATACTAAAGAGAAAGAGAAGCTCGAGGGCACTCTCGGGTCTCCTCAGCTGCAATATCAGCACTTTGCTTGGGAAGAAATTATGGCTGCCACTTCATCATTCTCAGAAGAACTGAAGATCGGAATGGGAGCTTACGGAGCTGTTTACAAGTGTAATCTGCATCATACAACTGCAGTTGTCAAAGTTTTGCAGTCAGCTGAAAATCAACTTTCCAAACAATTCCAACAAGAGCTCGAAATCTTGAGCAAGATTAGGCATCCACATTTGGTTCTCCTTCTAGGAGCGTGCCCGGAGCAAGGTGCTTTAGTTTATGAGTACATGGAAAACGGTAGCTTGGAGGACAGACTTTTCCAGGTCAACAACAGTCCGCCACTCCCGTGGTTTGAGCGGTTTAGGATTGCTTGGGAAGTTGCAGCGGCTCTTGTCTTCCTCCACAAATCAAAGCCTAAACCAATCATTCACCGTGATCTTAAACCTGCAAACATCTTACTTGATCACAACTTTGTCAGCAAAGTTGGAGACGTGGGACTCTCAACGATGGTTCAAGTCGATCCTCTATCAACTAAATTCACTATATACAAACAAACAAGCCCCGTGGGAACGTTATGCTATATTGATCCGGAATATCAGCGCACTGGAAGGATATCATCGAAATCAGATATCTACTCCTTTGGAATGATTCTTCTTCAGCTTCTCACAGCAAAACCTGCTATTGCATTGACACATTTCGTTGAGAGCGCAATGGATAGTAATGATGAGTTCCTTAAGATCTTAGATCAGAAAGCCGGTAACTGGCCGATTGAAGAAACCCGGGAATTGGCCGCATTAGCTTTGTGTTGTACAGAGCTACGCGGGAAAGATAGACCTGATTTGAAAGATCAGATTCTTCCAGCGCTCGAAAACCTAAAGAAAGTAGCTGAAAAGGCAAGGAACTCATTTTCCGGCGTATCGACACAGCCTCCCACTCATTTCATCTGCCCATTACTTAAGGACGTGATGAACGAGCCGTGCGTTGCAGCAGACGGATACACATACGACCGTCATGCGATAGAGGAGTGGCTTAAGGAGCACAACACATCGCCGATGACGGATTCACCGTTGCATAGCAAGAACCTTTTACCCAATTATACTCTTTACACAGCCATCATGGAATGGAGGTCTACACGATAGTAGTAAGCCAAACTGTGTAGCGTTTTTGTGGATATATAAACGGCAAGACGTTTTGCTTTGTACTACTACTACACACATGCTGAATCAAAAATATAAACCGAAACGAAACCTTAATCATCTTGTAAACGAATATTCGGATCCATCCGTTAATTTGCCTCCAAATAAGAACACAAAACCATT
CDS Sequence
Protein Sequence