Gene Details:

• Gene ID: AT4G25100
• Gene Symbol: ATFSD1, FSD1
• Gene Name: ARABIDOPSIS FE SUPEROXIDE DISMUTASE 1, Fe superoxide dismutase 1
• Description: Fe superoxide dismutase 1;(source:Araport11)
• TAIR Accession: locus:2117273
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT4G25100.1     AT4G25100.3     AT4G25100.2     AT4G25100.4     AT4G25100.5

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020038  — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0020137  — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)

Gene Ontology:

• GO:0009570  — located in — chloroplast stroma
• GO:0005886  — located in — plasma membrane
• GO:0019430  — acts upstream of or within — removal of superoxide radicals
• GO:0005507  — enables — copper ion binding
• GO:0009507  — located in — chloroplast
• GO:0004784  — enables — superoxide dismutase activity
• GO:0005739  — located in — mitochondrion
• GO:0042644  — is active in — chloroplast nucleoid
• GO:0009941  — located in — chloroplast envelope
• GO:0046686  — acts upstream of or within — response to cadmium ion
• GO:0009642  — involved in — response to light intensity
• GO:0007623  — acts upstream of or within — circadian rhythm
• GO:0010193  — involved in — response to ozone
• GO:0046688  — acts upstream of or within — response to copper ion
• GO:0005829  — located in — cytosol
• GO:0009579  — located in — thylakoid
• GO:0005737  — located in — cytoplasm

Function-related keywords:

• shoot axis apex ,  leaf lamina base ,  shoot system ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  inflorescence flower pedicel ,  cotyledon ,  petiole ,  hypocotyl ,  leaf apex ,  collective leaf structure ,  pollen

Literature:

• Superoxide dismutase in Arabidopsis: an eclectic enzyme family with disparate regulation and protein localization.   DOI:  10.1104/pp.118.2.637 ;  PMID:  9765550
• Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction.   DOI:  10.1105/tpc.010304 ;  PMID:  11826309
• Full-length messenger RNA sequences greatly improve genome annotation.   DOI:  10.1186/gb-2002-3-6-research0029 ;  PMID:  12093376
• The impact of oxidative stress on Arabidopsis mitochondria.   DOI:  10.1046/j.1365-313x.2002.01474.x ;  PMID:  12492832
• Effects of leaf ascorbate content on defense and photosynthesis gene expression in Arabidopsis thaliana.   DOI:  10.1089/152308603321223513 ;  PMID:  12626114
• The water-water cycle is essential for chloroplast protection in the absence of stress.   DOI:  10.1074/jbc.M304987200 ;  PMID:  12885779
• A methyl viologen-resistant mutant of Arabidopsis, which is allelic to ozone-sensitive rcd1, is tolerant to supplemental ultraviolet-B irradiation.   DOI:  10.1104/pp.103.033480 ;  PMID:  14657410
• Selective and powerful stress gene expression in Arabidopsis in response to malondialdehyde.   DOI:  10.1111/j.1365-313x.2003.02013.x ;  PMID:  14996219
• Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome.   DOI:  10.1074/mcp.M400001-MCP200 ;  PMID:  15060130
• The response regulator 2 mediates ethylene signalling and hormone signal integration in Arabidopsis.   DOI:  10.1038/sj.emboj.7600337 ;  PMID:  15282545
• The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions.   DOI:  10.1016/j.phytochem.2004.03.028 ;  PMID:  15276431
• Transcriptional profiling by cDNA-AFLP and microarray analysis reveals novel insights into the early response to ethylene in Arabidopsis.   DOI:  10.1111/j.1365-313X.2004.02156.x ;  PMID:  15272873
• Comparative genomics in salt tolerance between Arabidopsis and aRabidopsis-related halophyte salt cress using Arabidopsis microarray.   DOI:  10.1104/pp.104.039909 ;  PMID:  15247402
• Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought-responsive cis-element in the early responsive to dehydration stress 1 promoter.   DOI:  10.1105/tpc.104.022699 ;  PMID:  15319476
• Evidence for a direct link between glutathione biosynthesis and stress defense gene expression in Arabidopsis.   DOI:  10.1105/tpc.104.022608 ;  PMID:  15308753
• Diurnal changes in the transcriptome encoding enzymes of starch metabolism provide evidence for both transcriptional and posttranscriptional regulation of starch metabolism in Arabidopsis leaves.   DOI:  10.1104/pp.104.044347 ;  PMID:  15347792
• Maximizing the efficacy of SAGE analysis identifies novel transcripts in Arabidopsis.   DOI:  10.1104/pp.104.043406 ;  PMID:  15489285
• Loss of TIP1;1 aquaporin in Arabidopsis leads to cell and plant death.   DOI:  10.1111/j.1365-313X.2004.02265.x ;  PMID:  15584951
• Two P-type ATPases are required for copper delivery in Arabidopsis thaliana chloroplasts.   DOI:  10.1105/tpc.104.030452 ;  PMID:  15772282
• A proteomic approach to apoplastic proteins involved in cell wall regeneration in protoplasts of Arabidopsis suspension-cultured cells.   DOI:  10.1093/pcp/pci089 ;  PMID:  15769804
• Leucine-rich repeat receptor-like kinase1 is a key membrane-bound regulator of abscisic acid early signaling in Arabidopsis.   DOI:  10.1105/tpc.104.027474 ;  PMID:  15772289
• Transcriptional profiling of imbibed Brassica napus seed.   DOI:  10.1016/j.ygeno.2005.07.006 ;  PMID:  16125897
• The zinc-finger protein Zat12 plays a central role in reactive oxygen and abiotic stress signaling in Arabidopsis.   DOI:  10.1104/pp.105.068254 ;  PMID:  16183833
• 12-oxo-phytodienoic acid triggers expression of a distinct set of genes and plays a role in wound-induced gene expression in Arabidopsis.   DOI:  10.1104/pp.105.067058 ;  PMID:  16258017
• Analysis of the female gametophyte transcriptome of Arabidopsis by comparative expression profiling.   DOI:  10.1104/pp.105.067314 ;  PMID:  16299181
• Proteomic analysis of different mutant genotypes of Arabidopsis led to the identification of 11 proteins correlating with adventitious root development.   DOI:  10.1104/pp.105.067868 ;  PMID:  16377752
• Features of Arabidopsis genes and genome discovered using full-length cDNAs.   DOI:  10.1007/s11103-005-2564-9 ;  PMID:  16463100
• Peroxiredoxin Q of Arabidopsis thaliana is attached to the thylakoids and functions in context of photosynthesis.   DOI:  10.1111/j.1365-313X.2006.02665.x ;  PMID:  16507087
• Large-scale analysis of mRNA translation states during sucrose starvation in arabidopsis cells identifies cell proliferation and chromatin structure as targets of translational control.   DOI:  10.1104/pp.106.079418 ;  PMID:  16632591
• The heavy metal hyperaccumulator Thlaspi caerulescens expresses many species-specific genes, as identified by comparative expressed sequence tag analysis.   DOI:  10.1111/j.1469-8137.2006.01714.x ;  PMID:  16684236
• Large expression differences in genes for iron and zinc homeostasis, stress response, and lignin biosynthesis distinguish roots of Arabidopsis thaliana and the related metal hyperaccumulator Thlaspi caerulescens.   DOI:  10.1104/pp.106.082073 ;  PMID:  16998091
• Chromosomal clustering of nuclear genes encoding mitochondrial and chloroplast proteins in Arabidopsis.   DOI:  10.1016/j.tig.2006.09.002 ;  PMID:  16979780
• Arabidopsis SLIM1 is a central transcriptional regulator of plant sulfur response and metabolism.   DOI:  10.1105/tpc.106.046458 ;  PMID:  17114350
• PIC1, an ancient permease in Arabidopsis chloroplasts, mediates iron transport.   DOI:  10.1105/tpc.106.047407 ;  PMID:  17337631
• Alternative and effective proteomic analysis in Arabidopsis.   DOI:  10.1002/pmic.200700346 ;  PMID:  17828791
• Systemic and intracellular responses to photooxidative stress in Arabidopsis.   DOI:  10.1105/tpc.106.045898 ;  PMID:  18156220
• Light has a specific role in modulating Arabidopsis gene expression at low temperature.   DOI:  10.1186/1471-2229-8-13 ;  PMID:  18230142
• and extracellular-sourced ROS on high light-responsive gene expression in Arabidopsis.   DOI:  10.1093/jxb/erm289 ;  PMID:  18212028
• Long-term effects of mild salt stress on growth, ion accumulation and superoxide dismutase expression of Arabidopsis rosette leaves.   DOI:  10.1111/j.1399-3054.2007.01009.x ;  PMID:  18275461
• Identification of negative cis-acting elements in response to copper in the chloroplastic iron superoxide dismutase gene of the moss Barbula unguiculata.   DOI:  10.1104/pp.107.114868 ;  PMID:  18258690
• AtOSA1, a member of the Abc1-like family, as a new factor in cadmium and oxidative stress response.   DOI:  10.1104/pp.107.110247 ;  PMID:  18390807
• A rice serine carboxypeptidase-like gene OsBISCPL1 is involved in regulation of defense responses against biotic and oxidative stress.   DOI:  10.1016/j.gene.2008.05.006 ;  PMID:  18571878
• Enhanced tolerance to oxidative stress in transgenic Arabidopsis plants expressing proteins of unknown function.   DOI:  10.1104/pp.108.124875 ;  PMID:  18614705
• Transcriptional responses of Arabidopsis thaliana plants to As (V) stress.   DOI:  10.1186/1471-2229-8-87 ;  PMID:  18684332
• Characterization of Arabidopsis lines deficient in GAPC-1, a cytosolic NAD-dependent glyceraldehyde-3-phosphate dehydrogenase.   DOI:  10.1104/pp.108.128769 ;  PMID:  18820081
• Leaf proteome responses of Arabidopsis thaliana exposed to mild cadmium stress.   DOI:  10.1016/j.jplph.2009.09.015 ;  PMID:  20005002
• Systems analysis of seed filling in Arabidopsis: using general linear modeling to assess concordance of transcript and protein expression.   DOI:  10.1104/pp.109.152413 ;  PMID:  20118269
• Oxidative stress-related responses at transcriptional and enzymatic levels after exposure to Cd or Cu in a multipollution context.   DOI:  10.1016/j.jplph.2009.06.014 ;  PMID:  19709775
• Unraveling uranium induced oxidative stress related responses in Arabidopsis thaliana seedlings. Part I: responses in the roots.   DOI:  10.1016/j.jenvrad.2011.03.015 ;  PMID:  21492976
• AtACDO1, an ABC1-like kinase gene, is involved in chlorophyll degradation and the response to photooxidative stress in Arabidopsis.   DOI:  10.1093/jxb/ers072 ;  PMID:  22447966
• RAP2.6L overexpression delays waterlogging induced premature senescence by increasing stomatal closure more than antioxidant enzyme activity.   DOI:  10.1007/s11103-012-9936-8 ;  PMID:  22661072
• Roles of NIA/NR/NOA1-dependent nitric oxide production and HY1 expression in the modulation of Arabidopsis salt tolerance.   DOI:  10.1093/jxb/ert149 ;  PMID:  23744476
• The CTR/COPT-dependent copper uptake and SPL7-dependent copper deficiency responses are required for basal cadmium tolerance in A. thaliana.   DOI:  10.1039/c3mt00111c ;  PMID:  23835944
• Modulation of copper deficiency responses by diurnal and circadian rhythms in Arabidopsis thaliana.   DOI:  10.1093/jxb/erv474 ;  PMID:  26516126
• Geomagnetic Field (Gmf) and Plant Evolution: Investigating the Effects of Gmf Reversal on Arabidopsis thaliana Development and Gene Expression.   DOI:  10.3791/53286 ;  PMID:  26649488
• Arabidopsis Pollen Fertility Requires the Transcription Factors CITF1 and SPL7 That Regulate Copper Delivery to Anthers and Jasmonic Acid Synthesis.   DOI:  10.1105/tpc.17.00363 ;  PMID:  29114014
• 24-Epibrassinolide promotes arsenic tolerance in Arabidopsis thaliana L. by altering stress responses at biochemical and molecular level.   DOI:  10.1016/j.jplph.2019.05.002 ;  PMID:  31121523
• The Ubiquitin E3 Ligase PRU2 Modulates Phosphate Uptake in Arabidopsis.   DOI:  10.3390/ijms23042273 ;  PMID:  35216388
• Energy status-promoted growth and development of Arabidopsis require copper deficiency response transcriptional regulator SPL7.   DOI:  10.1093/plcell/koac215 ;  PMID:  35866980
• Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction.   DOI:  10.1105/tpc.010304 ;  PMID:  11826309
• The impact of oxidative stress on Arabidopsis mitochondria.   DOI:  10.1046/j.1365-313x.2002.01474.x ;  PMID:  12492832
• Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana.   DOI:  10.1074/mcp.M300030-MCP200 ;  PMID:  12766230
• The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions.   DOI:  10.1016/j.cub.2004.02.039 ;  PMID:  15028209
• Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome.   DOI:  10.1074/mcp.M400001-MCP200 ;  PMID:  15060130
• The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions.   DOI:  10.1016/j.phytochem.2004.03.028 ;  PMID:  15276431
• Proteomic analysis of different mutant genotypes of Arabidopsis led to the identification of 11 proteins correlating with adventitious root development.   DOI:  10.1104/pp.105.067868 ;  PMID:  16377752
• Proteomic survey of copper-binding proteins in Arabidopsis roots by immobilized metal affinity chromatography and mass spectrometry.   DOI:  10.1002/pmic.200500108 ;  PMID:  16526091
• A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome.   DOI:  10.1074/mcp.M700099-MCP200 ;  PMID:  17644812
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts.   DOI:  10.1074/mcp.M500180-MCP200 ;  PMID:  16207701
• Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism.   DOI:  10.1021/pr1009433 ;  PMID:  21166475
• Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction.   DOI:  10.1105/tpc.010304 ;  PMID:  11826309
• Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana.   DOI:  10.1074/mcp.M300030-MCP200 ;  PMID:  12766230
• The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions.   DOI:  10.1016/j.cub.2004.02.039 ;  PMID:  15028209
• Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome.   DOI:  10.1074/mcp.M400001-MCP200 ;  PMID:  15060130
• The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions.   DOI:  10.1016/j.phytochem.2004.03.028 ;  PMID:  15276431
• Proteomic survey of copper-binding proteins in Arabidopsis roots by immobilized metal affinity chromatography and mass spectrometry.   DOI:  10.1002/pmic.200500108 ;  PMID:  16526091
• A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome.   DOI:  10.1074/mcp.M700099-MCP200 ;  PMID:  17644812
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism.   DOI:  10.1021/pr1009433 ;  PMID:  21166475
• Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction.   DOI:  10.1105/tpc.010304 ;  PMID:  11826309
• Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana.   DOI:  10.1074/mcp.M300030-MCP200 ;  PMID:  12766230
• The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions.   DOI:  10.1016/j.cub.2004.02.039 ;  PMID:  15028209
• Identification of new intrinsic proteins in Arabidopsis plasma membrane proteome.   DOI:  10.1074/mcp.M400001-MCP200 ;  PMID:  15060130
• The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions.   DOI:  10.1016/j.phytochem.2004.03.028 ;  PMID:  15276431
• Proteomic survey of copper-binding proteins in Arabidopsis roots by immobilized metal affinity chromatography and mass spectrometry.   DOI:  10.1002/pmic.200500108 ;  PMID:  16526091
• A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome.   DOI:  10.1074/mcp.M700099-MCP200 ;  PMID:  17644812
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism.   DOI:  10.1021/pr1009433 ;  PMID:  21166475
• Proteomic survey of copper-binding proteins in Arabidopsis roots by immobilized metal affinity chromatography and mass spectrometry.   DOI:  10.1002/pmic.200500108 ;  PMID:  16526091
• A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome.   DOI:  10.1074/mcp.M700099-MCP200 ;  PMID:  17644812
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism.   DOI:  10.1021/pr1009433 ;  PMID:  21166475
• Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling.   DOI:  10.1016/j.jprot.2017.06.004 ;  PMID:  28627464

Sequences: