AT4G24560

Gene Details

Gene ID: AT4G24560
Gene Symbol: UBP16
Gene Name: ubiquitin-specific protease 16
Description: ubiquitin-specific protease 16;(source:Araport11)
TAIR Accession:
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Functional Descriptions

PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)

CS860103 — No visible phenotype.
CS860120 — The phenotype of ubp15-2 ubp16-1 is similar to that of the ubp15-2 mutant (CS860102), but more severe, with more extreme narrow rosette leaves, smaller flowers, aborted siliques, dwarf plants.
CS860121 — The phenotype of the double mutant ubp15-1 ubp17-1 is similar to that of the ubp15-1 mutant (CS860101). Short roots at seedling stage; flat rosettes with narrow and serrated leaves; leaf phenotype becomes more severe in later rosette leaves; reduced weight of rosette leaf per area; strong reduction in width than in length of the rosette leaf blade; decreased epidermal and palisade cell number across the leaf blade; few rosette leaves before bolting; early flowering; weak apical dominance; reduced fertility; small flowers; short siliques; short and slim stems; small plants.
CS860122 — The phenotype of ubp15-2 ubp17-2 is similar to that of the ubp15-2 mutant (CS860102). Short roots at seedling stage; flat rosettes with narrow and serrated leaves; leaf phenotype becomes more severe in later rosette leaves; reduced weight of rosette leaf per area; strong reduction in width than in length of the rosette leaf blade; decreased epidermal and palisade cell number across the leaf blade; few rosette leaves before bolting; early flowering; weak apical dominance; reduced fertility; small flowers; short siliques; short and slim stems; small plants.
CS860124 — Phenotype similar to that of the double mutant ubp15-1 ubp16-1; similar but more severe than the phenotype of the ubp15-1 mutant (CS860101), with more extreme narrow rosette leaves, smaller flowers, aborted siliques, dwarf plants.

Functional Keywords

Literature and News

Gene Resources

Sequences

cDNA Sequence

>AT4G24560.1
CAAAAAAAAAAAAAGGTTGTCTGGTCTGGTAAAATGAAAAAGCAAAGCGTCTTGGTATAGAAAAGTAATATACTGCCTCCTAATTTCTTCGTCCTTCTACCGAAGAATCTCTCCACTCTTGCCCTCTTTCGAAACCCTAAACCAGAAGCACCAGATTTTTTCAACTTTTTCCCAGAGAACAATAGAAAACCCAACTTGTGCTCTCTAGGGTTTTCTTTATTCCTTCTCATCTTTGGATTTTCTTGGGTCATCATTTTGGAAGCTTACCCACCAGCGAAAAAATTATAACTTCCATCGATTCCTGGCTTCTCTCTCTCGCTCTCTCTGCATGTGCTAAATCGCCGGACTGATCCTCACTGTCACCTCTGTTCCCGGCTTATTCGCCGGTGAAATCTATGGTTGGTGCTCAGATTTATTTCCAATTGTTTGTGCATCTGGTGGAGGATAAATGCTCCTTGTTTTGGATCTAGGGATTTCTAGTCTAGTCCTTGTGGTCTCTCTTGTTTTACCTTTGATCGGTCTCTTTGTTCGTCACAAATGGAGGGTCGCTGCCCAAAGAAGGGAGGAGATTAGAAGACTTCTTATTCATGCTTCTGAAGAGGCTGCCAGGGCTGAGCTAGAGGCCTCTGTTGAGTTCTCTTCTGTTGCCGTCTCTAATGTCTTCCATTGTCCTGTTTGCTATTGTCTTGCCACGACTCGTTGCTCTCGCTGCAAAGCCGTTCGATATTGTTCCGGGAAATGTCAAATCATTCACTGGCGGCAAGGTCACAAAGATGAATGTCATCCTGCTTCCATTGTATATGATAGTGAAGATGAGAGTGATTCCGATTTGAGATTAGGAGAAGAAAATGGACAAAATACTCCTGAGGAAACTTTACTGGTGGGTCCAGAACCAGTTACTATACCAATCGGGGAATCACTATTATCTAATCGTGCCAGATCTCCTGAAGATGGGAATGGAGATATTGCAGATAACAAAGATGACCTTATAGATAAGGAAGAAGCTGTTTCTGTTGCTGAAACATCTGGATCCTCGTTTTCTGGCTTCTCCTCCTCCCCCCGTAATGACTCTGGCGACGAGATTTCTCGTTGTGAGAGCTTCAGTTCATCTGAATCCGAGAGATCAGAGTCCCTACTTGATGCTCATGTCTCTGTAGAGCCAGAAGACACCTGTTTCAGCACCATTGAAGATGCTCCATCCAAACTGTTGTCTCCAAAATTTGTGCACTTGGTTGAATCTGTAGATAATCTCGCTAATCTGCCTAAATTAAGTGTACATAAACCTGAGGATGATGCTGGGCAGAACCAGAGCCAATCAAGGAGCTTACACTCATTAGTTACGGATAGGCATCCAGTATCAGCTGACCCATCTCTGAAGTCATCTGATTTTTGGGGTACGGCTCTTGGATCAGCCGAACGTGTGAGTGATTCTTGTGTTAAATCTAAATCTGGTAGACCTGGTAACTCCTCTCTGCATTTCTCCTTTGGCTCTGGCTCCTCTAGAGACACCTCAGCTGCTAAAGTTTCTGAGCAGAGGAGTAGCATTTTAAAAGAAGCTCCTAGGGGGACTGGTTATATATCTGATGGAGTAAACTTAAGAGAAAGAAATGCTAAAAGATTTGATGAAGCTGAAATTGCATTACCAATTTCCTCTTCTACTGATGCGCTGAGTCCTTTGGACTCTTCTAATTTGTCCCATGTGACCCTTCCGAAGTCAAAGAGCGCTAGTAGTGAAAATGGCTCTATGTTGGCCCCTTTGAAGGTTGGGGAAGTCCAACTTTTGGCATCCAAGGCCTCGAATACCAAGAAGTGTGCTGATCTTATGAAGCATTCTCCTTTAGGTGCAAAATCGGTAAGAGTTCTTGATCATCAGAAACAGAATGGTGCTGTCGTTCAGCATATAAATTCTCTACATGGAAGAAGTGGTTTAAAGGCATCAGTACTGAAAGTTGTAGACCAGTGGACCAGACCGAAGTCTGAAAATGAGATGGCAGGAAGACATGGTCATAAGGGGCTCTTTCCATATGAAGTCTTTGCTAAACTGTATACATATAAAATTGAGTTCCAGCCTTGTGGCCTCATCAACGTTGGCAATAGCTGCTTTGCTAATGTTGTCTTTCAATGCCTTATGTTCACTCCTCCTCTGACGACATACTTCCTCCAGCAATTTCATTCCAGAGCATGTACAAAAAAAGAACAGTGCTTCACCTGTGGGTTTGAGAAGCTGGTCGTAAAGGCAAAAGAAGAGAAGTCTCCACTGTCCCCTAATGGCTTGCTATCTCAGCTGCAGAATATTGGAATCTTTCTTGGGAATGGCAAGGAAGAAGATGCACATGAATTCCTTAGGTTTGTTGTCGATACAATGCAGTCTGTGTGCATTAAGGCATCTGAATATGATATGACCAAGAGTAGCAAATTAGAAGATACAACTCTTATTGGTTTGACATTTGGGGGATACCTCCGGTCAAAGATTAAATGCATGAAATGTCAAGTAAAATCTGAGCTGCGTGAGAAAATGATGGATCTAACGGTTGAGATTGATGGAGATATTAGCACCCTGGATGATGCTTTGCGTCGATTTACAAGGACTGAGATATTGGATGGAGAGAACAAATACAGATGTGGCAGCTGTAAATCCTATGAGAGAGCCAAAAAGAAGCTGAAAATAACAGAGCCTCCGAATGTCCTTACCATTGCACTAAAACGATTCCAGGCAGGGAAATTCGGGAAGCTCAATAAGTTGATTAGGTTTCCAGAAACTCTAGATTTGGCTCCATATGTCAGTGGGGGAAGTGAAAAATCACATGACTACAAACTCTATGGAGTTATTGTTCACTTGGATGTAATGAATGCAGCATTTTCTGGCCATTATGTCTGCTATATTAGAAACCAAAATAAGTGGTACAAGGCTGATGATAGCACGGTAGTAACTTCGGATGTGGAAAGGATCTTGACAAAGGGAGCGTATATGTTGTTCTACGCAAGGTGCACTCCAACGCCTCCAAGATTAGCAGTATGTACCAAAACTGAAGCATCCAATAAAAAAAGCAGAGTGCCACTACCTAAGGCTAATGAGAAAAGTACCATATCCCGGTCTGTGTCTACTTCAAGTCCTGAGTTGTCTTCCAACACGCCTGGTGGTGGTCGATCCGGCAATATACAGTCATTTTATTCTAGTTTCCAGAGGCTGCAGAAGATTTTAGAAGAAGACTCGGCGAGTGACAGTTCATCTCTCTTTGACAGCAACTCAGATGAATGCTCTTGTAGCACAGACAGTACAAGCATGGACGACTTTGCTGATTTCATTTTTGGAGATCATCAGGGACGGGCTCACGGACAGTCTGAGACTCCCTCACCAACATCATCGTCTTCCTCATCTTCTCCCCCCTTCACAAGGCGTTCGCCGCTCAGTCGTTCTTCTCCAGAAACTTACGGAACCTCAAGACATCAGTTGCCCTTGGGAGGAGAAAGGTAAGGGAAACAAGATGGTTTTTTGTCCACTTGGCCCCAACTAAGTCAAAAGTAGTAGAAGAAAGTAGATTTGATTACACGTAGATTGAGTGGTTTTATTAACAACCCGTATTTAGGCTTGGTGAAAGTGGTTAATGAGAGAAGTGGTGGTATATAGTAGTGTATAGTGGGGAAGAGAGTTTTTGCCCATGAAATTGTATCACGTAATGGAACGGAATTTACCTTTGTTAATAAGTTGTTTTGACTTTTATTATAATCAATCAATAAAGCTAATCTAATATTGTCTCATCGTTGCAC

CDS Sequence

Protein Sequence