Information report for AT4G24550
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Functional differentiation of peroxisomes revealed by expression profiles of peroxisomal genes in Arabidopsis thaliana. DOI: 10.1093/pcp/pcg173 ; PMID: 14701923
- Genome-wide investigation of light and carbon signaling interactions in Arabidopsis. DOI: 10.1186/gb-2004-5-2-r10 ; PMID: 14759260
- Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis. DOI: 10.1104/pp.105.063743 ; PMID: 16166256
- High-affinity nitrate transport in roots of Arabidopsis depends on expression of the NAR2-like gene AtNRT3.1. DOI: 10.1104/pp.105.074385 ; PMID: 16415212
- A central role for the nitrate transporter NRT2.1 in the integrated morphological and physiological responses of the root system to nitrogen limitation in Arabidopsis. DOI: 10.1104/pp.105.075721 ; PMID: 16415211
- Dissection of the AtNRT2.1:AtNRT2.2 inducible high-affinity nitrate transporter gene cluster. DOI: 10.1104/pp.106.091223 ; PMID: 17085507
- The Arabidopsis NRT1.1 transporter participates in the signaling pathway triggering root colonization of nitrate-rich patches. DOI: 10.1073/pnas.0605275103 ; PMID: 17148611
- Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis. DOI: 10.1186/gb-2007-8-1-r7 ; PMID: 17217541
- Regulation of root nitrate uptake at the NRT2.1 protein level in Arabidopsis thaliana. DOI: 10.1074/jbc.M700901200 ; PMID: 17573350
- Identification of a 150 bp cis-acting element of the AtNRT2.1 promoter involved in the regulation of gene expression by the N and C status of the plant. DOI: 10.1111/j.1365-3040.2007.01712.x ; PMID: 17897408
- Nitrite acts as a transcriptome signal at micromolar concentrations in Arabidopsis roots. DOI: 10.1104/pp.107.108944 ; PMID: 17951451
- Systems approach identifies an organic nitrogen-responsive gene network that is regulated by the master clock control gene CCA1. DOI: 10.1073/pnas.0800211105 ; PMID: 18344319
- Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106. DOI: 10.1104/pp.108.126979 ; PMID: 18805951
- Arabidopsis μ-adaptin subunit AP1M of adaptor protein complex 1 mediates late secretory and vacuolar traffic and is required for growth. DOI: 10.1073/pnas.1300460110 ; PMID: 23733933
- The Adaptor Complex AP-4 Regulates Vacuolar Protein Sorting at the trans-Golgi Network by Interacting with VACUOLAR SORTING RECEPTOR1. DOI: 10.1104/pp.15.00869 ; PMID: 26546666
- Polar Localization of the Borate Exporter BOR1 Requires AP2-Dependent Endocytosis. DOI: 10.1104/pp.18.01017 ; PMID: 30710051
- AP1/2β-mediated exocytosis of tapetum-specific transporters is required for pollen development in Arabidopsis thaliana. DOI: 10.1093/plcell/koac192 ; PMID: 35766888
Gene Resources
- UniProt: F4JQZ0
- EMBL: CP002687
- AlphaFoldDB: F4JQZ0
- EnsemblPlants: AT4G24550.1
- Gramene: AT4G24550.1
- ExpressionAtlas: AT4G24550
- InterPro: IPR001392, IPR011012, IPR022775
- PANTHER: PTHR10529
- SUPFAM: SSF49447, SSF64356
- PROSITE: PS51072
- Gene3D: 2.60.40.1170, 3.30.450.60
- OrthoDB: F4JQZ0
- SWISS-MODEL: F4JQZ0
- Conserved Domain Database: cd14838
Sequences
cDNA Sequence
- >AT4G24550.1
AGCTTCACGATAACGACGGCAAATGGTAAAACGTGAACCACCTCACCACCAGACACACAAAAAGACGAGACCGATCGGCGATCAGTAGACTTAACCAAACTCGCGGTGAAACAGTCGGAATCCACCGCTATAAGGAACGATGATGATCTCCCAATTCTTCGTCTTATCTCAGCGAGGAGATAACATCGTCTTCCGTGACTACCGGGCTGAGGTACCCAAAGGAAGTACAGAGACATTCTTCCGTAAAGTCAAGTTCTGGAAGGAGGATGGCAATGCAGAGGCGCCACCTATCTTTAATGTCGATGGCGTGAACTACTTCCATGTCAAGGTTGTTGGTCTATATTTTGTTGCGACAACGAGAGTTAACGTGTCACCCTCTCTTGTTTTGGAGCTTCTACAAAGGATTGCTCGTGTTATTAAGGATTATCTTGGTGTTCTGAATGAAGATTCATTCAGGAAAAACTTTGTGCTCGTGTATGAGTTGCTTGATGAAGTTATTGATTTTGGTTACGTGCAAACTACATCTACCGAAGTTTTGAAATCTTATATATTCAATGAGCCGATTGTGGTTTCTCCTGCCCGCCTTCAGCCTATTGATCCTGCTGCCATTTTCACACAAGGAGCCAAAAGAATGCCTGGAACTGCAGTTACAAAATCGGTTGTGGCTAATGATCCTGGGGGTCGGAGAAGAGAGGAAATTTTTGTGGACATCATCGAGAAAATCAGTGTTACTTTTAGTTCAAGCGGATATATACTGACTTCTGAGATTGATGGCACCATTCAAATGAAGAGCTATCTTTCTGGTAATCCAGAAATCCGTTTAGCTCTTAATGAAGACCTAAACATAGGAAGAGGAGGGAGATCAGTATATGATTATAGGAGTTCTTCAGGTTCAGGGGTGATACTTGATGATTGTAACTTTCATGAGTCTGTTCGTCTGGATAGCTTCGATTCAGATAGAACTTTGTCCCTGGTTCCACCAGATGGTGAATTTCCAGTAATGAATTACCGTATGACTCAGGAGTTCAAGCCTCCTTTTCATGTTAATACCTTGATTGAAGAGGCTGGACGTCTTAAGGCTGAAGTGATTATTAAAATACGCGCTGAGTTCCCTTCAGACATAATTGCAAACACAATCACTGTTCAGATGCCATTGCCAAATTATACTTCCAGGGCTAGTTTTGAGTTAGAACCCGGTGCTGCTGGACAGAGGACAGATTTCAAGGAATCCAACAAAATGCTTGAATGGAATTTAAAAAAGGCAAATTGTTGGCGGGGGTGAGCATACACTGCGTGCAAAGCTTACATTTTCACAGGAATTTCATGGTAATATCACAAAGGAAGCAGGGCCAGTCAGCATGACGTTCACGATACCTATGTACAATGTTTCTAAACTTCAGGTCAAATACTTGCAGATAGCAAAGAAATCAAGTAGTTATAATCCATATCGTTGGGTGAGATATGTGACACAGGCGAATTCTTATGTGGCTAGGATATGACCTGTTTTCAGATAATGTTTATCCTTCACTTGTATGTCTAAGTACTTTCTCTTTTCATTTTCGGATCACACTTGCTTCACAGTACTGTGTTGAATGTTGTCTCTTCTATTTGGATACTTTCTTGTTTCGGTATCAACATATATGG - >AT4G24550.2
AGCTTCACGATAACGACGGCAAATGGTAAAACGTGAACCACCTCACCACCAGACACACAAAAAGACGAGACCGATCGGCGATCAGTAGACTTAACCAAACTCGCGGTGAAACAGTCGGAATCCACCGCTATAAGGAACGATGATGATCTCCCAATTCTTCGTCTTATCTCAGCGAGGAGATAACATCGTCTTCCGTGACTACCGGGCTGAGGTACCCAAAGGAAGTACAGAGACATTCTTCCGTAAAGTCAAGTTCTGGAAGGAGGATGGCAATGCAGAGGCGCCACCTATCTTTAATGTCGATGGCGTGAACTACTTCCATGTCAAGGTTGTTGGTCTATATTTTGTTGCGACAACGAGAGTTAACGTGTCACCCTCTCTTGTTTTGGAGCTTCTACAAAGGATTGCTCGTGTTATTAAGGATTATCTTGGTGTTCTGAATGAAGATTCATTCAGGAAAAACTTTGTGCTCGTGTATGAGTTGCTTGATGAAGTTATTGATTTTGGTTACGTGCAAACTACATCTACCGAAGTTTTGAAATCTTATATATTCAATGAGCCGATTGTGGTTTCTCCTGCCCGCCTTCAGCCTATTGATCCTGCTGCCATTTTCACACAAGGAGCCAAAAGAATGCCTGGAACTGCAGTTACAAAATCGGTTGTGGCTAATGATCCTGGGGGTCGGAGAAGAGAGGAAATTTTTGTGGACATCATCGAGAAAATCAGTGTTACTTTTAGTTCAAGCGGATATATACTGACTTCTGAGATTGATGGCACCATTCAAATGAAGAGCTATCTTTCTGGTAATCCAGAAATCCGTTTAGCTCTTAATGAAGACCTAAACATAGGAAGAGGAGGGAGATCAGTATATGATTATAGGAGTTCTTCAGGTTCAGGGGTGATACTTGATGATTGTAACTTTCATGAGTCTGTTCGTCTGGATAGCTTCGATTCAGATAGAACTTTGTCCCTGGTTCCACCAGATGGTGAATTTCCAGTAATGAATTACCGTATGACTCAGGAGTTCAAGCCTCCTTTTCATGTTAATACCTTGATTGAAGAGGCTGGACGTCTTAAGGCTGAAGTGATTATTAAAATACGCGCTGAGTTCCCTTCAGACATAATTGCAAACACAATCACTGTTCAGATGCCATTGCCAAATTATACTTCCAGGGCTAGTTTTGAGTTAGAACCCGGTGCTGCTGGACAGAGGACAGATTTCAAGGAATCCAACAAAATGCTTGAATGGAATTTAAAAAAGGCAAATTGTTGGCGGGGGTGAGCATACACTGCGTGCAAAGCTTACATTTTCACAGGAATTTCATGGTAATATCACAAAGGAAGCAGGGCCAGTCAGCATGACGTTCACGATACCTATGTACAATGTTTCTAAACTTCAGGTCAAATACTTGCAGATAGCAAAGAAATCAAGTAGTTATAATCCATATCGTTGGGTGAGATATGTGACACAGGCGAATTCTTATGTGGCTAGGATATGACCTGTTTTCAGATAATGTTTATCCTTCACTTGTATGTCTAAGTACTTTCTCTTTTCATTTTCGGATCACACTTGCTTCACAGTACTGTGTTGAATGTTGTCTCTTCTATTTGGATACTTTCTTGTTTCGGTATCAACATATATGG - >AT4G24550.3
AGCTTCACGATAACGACGGCAAATGGTAAAACGTGAACCACCTCACCACCAGACACACAAAAAGACGAGACCGATCGGCGATCAGTAGACTTAACCAAACTCGCGGTGAAACAGTCGGAATCCACCGCTATAAGGAACGATGATGATCTCCCAATTCTTCGTCTTATCTCAGCGAGGAGATAACATCGTCTTCCGTGACTACCGGGCTGAGGTACCCAAAGGAAGTACAGAGACATTCTTCCGTAAAGTCAAGTTCTGGAAGGAGGATGGCAATGCAGAGGCGCCACCTATCTTTAATGTCGATGGCGTGAACTACTTCCATGTCAAGGTTGTTGGTCTATATTTTGTTGCGACAACGAGAGTTAACGTGTCACCCTCTCTTGTTTTGGAGCTTCTACAAAGGATTGCTCGTGTTATTAAGGATTATCTTGGTGTTCTGAATGAAGATTCATTCAGGAAAAACTTTGTGCTCGTGTATGAGTTGCTTGATGAAGTTATTGATTTTGGTTACGTGCAAACTACATCTACCGAAGTTTTGAAATCTTATATATTCAATGAGCCGATTGTGGTTTCTCCTGCCCGCCTTCAGCCTATTGATCCTGCTGCCATTTTCACACAAGGAGCCAAAAGAATGCCTGGAACTGCAGTTACAAAATCGGTTGTGGCTAATGATCCTGGGGGTCGGAGAAGAGAGGAAATTTTTGTGGACATCATCGAGAAAATCAGTGTTACTTTTAGTTCAAGCGGATATATACTGACTTCTGAGATTGATGGCACCATTCAAATGAAGAGCTATCTTTCTGGTAATCCAGAAATCCGTTTAGCTCTTAATGAAGACCTAAACATAGGAAGAGGAGGGAGATCAGTATATGATTATAGGAGTTCTTCAGGTTCAGGGGTGATACTTGATGATTGTAACTTTCATGAGTCTGTTCGTCTGGATAGCTTCGATTCAGATAGAACTTTGTCCCTGGTTCCACCAGATGGTGAATTTCCAGTAATGAATTACCGTATGACTCAGGAGTTCAAGCCTCCTTTTCATGTTAATACCTTGATTGAAGAGGCTGGACGTCTTAAGGCTGAAGTGATTATTAAAATACGCGCTGAGTTCCCTTCAGACATAATTGCAAACACAATCACTGTTCAGATGCCATTGCCAAATTATACTTCCAGGGCTAGTTTTGAGTTAGAACCCGGTGCTGCTGGACAGAGGACAGATTTCAAGGAATCCAACAAAATGCTTGAATGGAATTTAAAAAAGGCAAATTGTTGGCGGGGGTGAGCATACACTGCGTGCAAAGCTTACATTTTCACAGGAATTTCATGGTAATATCACAAAGGAAGCAGGGCCAGTCAGCATGACGTTCACGATACCTATGTACAATGTTTCTAAACTTCAGGTCAAATACTTGCAGATAGCAAAGAAATCAAGTAGTTATAATCCATATCGTTGGGTGAGATATGTGACACAGGCGAATTCTTATGTGGCTAGGATATGACCTGTTTTCAGATAATGTTTATCCTTCACTTGTATGTCTAAGTACTTTCTCTTTTCATTTTCGGATCACACTTGCTTCACAGTACTGTGTTGAATGTTGTCTCTTCTATTTGGATACTTTCTTGTTTCGGTATCAACATATATGG
CDS Sequence
Protein Sequence