Gene Details:
- Gene ID: AT4G24490
- Gene Symbol: ATRGTA1, RGTA1
- Gene Name: RAB geranylgeranyl transferase alpha subunit 1, RAB geranylgeranyl transferase alpha subunit 1
- Description: RAB geranylgeranyl transferase alpha subunit 1;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism. DOI: 10.1023/a:1023005504702 ; PMID: 12777052
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- Arabidopsis RAB geranylgeranyl transferase beta-subunit mutant is constitutively photomorphogenic, and has shoot growth and gravitropic defects. DOI: 10.1111/j.1365-313X.2010.04172.x ; PMID: 20180921
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Sequences:
cDNA Sequence
- >AT4G24490.2
AATTGCCCGAAAACAAAAGTCTCTCTCTCTCGATCGACGCCGCAACGTGCTCCTTTCAGGTGATCTGCTTCTTATTCTCCATTTCGTCATCTCTGTTGTTTCTAGATTTGGATCACGTTTTTTCTTTCCTCGATCTAGTGTTTGTTTTAACTGTTTTCGTAATTTCTGATCAGATTTAACCGGAAAAGTTGAATCACACTGTCGCATCTCTCACAGTCGTCGGAGAAGAATGCACGGTCGTCCAAGGAATGCTTCTAAGCCAGAAGAGGAAGCAGCTTCAGCTGCTAAAGCTGTTCAGCTTCGCTCTCTCCAGTCTCAGTTTATGACGAATCATCACGATAAAATTTATACCAATGAAGCTATTGAGTTAAGCACGAAGCTTCTAGAAATCAATCCGGAGGCGTACACCGCATGGAACTACCGGAAGCTTGCTGTGGAGGATCGCCTTGCCAGAATTGAGCCTGATCCAAACTTGGTCAGCGCAATTCTTGATGAAGAACTCAGAGTGGTAGAAAGTGCTTTGAGGCAGAATTTCAAGTCCTATGGTGCTTGGCATCATCGAAAGTGGGTTTTGAGTAAAGGGCATTCATCCGTAGGGAATGAATTGAGACTTTTGGAAAAATTCCAGAAGCTGGATTCCAGAAATTTTCATGCTTGGAACTATCGCAGGTTTGTTGTAGAGCTAACCAACAGATCAGAACAGGATGAGTTGCAGTATACAGATGATATGATCAATAACAATTTCAGCAACTATTCTGCATGGCATAATCGTAGTGTACTTCTATCAAGTTTGTTGGCACAAAATGCTGATGGGTTTATGCCAAATATAAAGATTCCTGAGGAATATGACTTTGTACATTCGGCTATTTTTACGGAACCAGATGACCAAAGTGGCTGGTTTTATCATCTTTGGCTTCTTGACCAAACTCTTAATGTGGAGACTCCTCTTCTCACTTCCTCATGGCCTTCACATGGTTCAAGTATCATTCTGTCTGGAGCTGGGTGCTTGAGTGGCTCTTCATCTATGTTCACTACTTTTTGTTCTGAGTCGGGTTCTTTTCCACTGATTCTCTACTTTGACCAAGCTGTTGGTGGAGTAAGCTCATCTACTGTTACAATTGATTCTGAACTAAAAGGAAACGAGGGCCTTGTTTGGGAACCAATTCCGAACAAAAATTCTCAGGTGTCCTGTGTATGGGTTGCTCGTCTGAAATATGTCAGTTCAGATCCTTGCGAATACAAAGTGAAGATCAGAGTTGGGAACTCTCCAGGAATCGTTTCTTCCAGAGGATATAACTTCAACGCACCTTATGAGTTTGTCTTTACAGCCCATGTTCATGATACCGTCGAAGATTCTCAAGAAGGCATTGTTTCATGGACGGATGGATTTGATATTTGGGATGCGAAGTCAAAGGATTTGAATTCTCTTGTCACCTTGGATCGGTTAAATGCTGAGATGGATTTTAAATGGCGTCAGGAAGCTATAGATTCTGAGGTTGAATGTTTCGGTATACTGCCTGACAGCAAAATTGGAAAGCTCACTCTTGCAAGGCTTTTGATGGCTCGTGAAGCTATGGTATCGGATGATGCTGTCAAGGGTGTTCACTATGAAGAAATCCTTCAGCTGTATAACGATTTGATGGCGCTGGATTCTTCACACTACCAGTACTACAAGGATGAGCACAGCAAAGCTTTTCTCCACAAGGTGACTTCAAGCAGTGAATCTTTGTCAAGACACCTTTTGCGATATAGGGATATGAACAATCTTGTATGTCTACGGCTAAATAACTTATCACTATCTCGGATAGCCTCTGTTGAGAAGTTGCTGTTTGTCCAAATGTTAGACCTTAGTCACAATGAGCTTCATTCCACTGAAGGATTGGAGGCAATGCAACTTCTCTCTTGTCTAAATCTGAGTCACAACAGAATCCGGAGTTTTTCAGCGCTGGACTCTCTAAGACATGTGAAGCAGCTGAAAGTGTTGGATGTTTCACATAACCACATTGGCAAGCACTCAGTGGACACAACTAGATACCTTTGTTCTTCACCGCTCTCTAATTCAGAGTTGGGTCAGGATGATGTAGGAAAACAGAATCCTGGATTGGTTACGAAGTACTGGGATGCGTATTGCGTGTTAACAGATTTGAATCTGAAACAGTTAGATATAGCAGGAAATGAAATTGCAGGGGAGGAATTCAGCTCTTTTGTCCTCCAGGTTGTCCCAAAGCTTGTATGGCTCGATGGCCAGAAGAAACTTGGGAATTAGATCATAGGCCAAGTTTTTGTTTACTTTACCTTTCGATCATCAAATTCCCAAAGCAATTTAGGTTATCTTGATGATCTTTGTTGTTGTGATATTTCTTAGCAATCTTATTGATGACCTTTATTTACCAAATTTGGGTTGATATTTCCTAAAAATCTGAAT - >AT4G24490.1
AATTGCCCGAAAACAAAAGTCTCTCTCTCTCGATCGACGCCGCAACGTGCTCCTTTCAGGTGATCTGCTTCTTATTCTCCATTTCGTCATCTCTGTTGTTTCTAGATTTGGATCACGTTTTTTCTTTCCTCGATCTAGTGTTTGTTTTAACTGTTTTCGTAATTTCTGATCAGATTTAACCGGAAAAGTTGAATCACACTGTCGCATCTCTCACAGTCGTCGGAGAAGAATGCACGGTCGTCCAAGGAATGCTTCTAAGCCAGAAGAGGAAGCAGCTTCAGCTGCTAAAGCTGTTCAGCTTCGCTCTCTCCAGTCTCAGTTTATGACGAATCATCACGATAAAATTTATACCAATGAAGCTATTGAGTTAAGCACGAAGCTTCTAGAAATCAATCCGGAGGCGTACACCGCATGGAACTACCGGAAGCTTGCTGTGGAGGATCGCCTTGCCAGAATTGAGCCTGATCCAAACTTGGTCAGCGCAATTCTTGATGAAGAACTCAGAGTGGTAGAAAGTGCTTTGAGGCAGAATTTCAAGTCCTATGGTGCTTGGCATCATCGAAAGTGGGTTTTGAGTAAAGGGCATTCATCCGTAGGGAATGAATTGAGACTTTTGGAAAAATTCCAGAAGCTGGATTCCAGAAATTTTCATGCTTGGAACTATCGCAGGTTTGTTGTAGAGCTAACCAACAGATCAGAACAGGATGAGTTGCAGTATACAGATGATATGATCAATAACAATTTCAGCAACTATTCTGCATGGCATAATCGTAGTGTACTTCTATCAAGTTTGTTGGCACAAAATGCTGATGGGTTTATGCCAAATATAAAGATTCCTGAGGAATATGACTTTGTACATTCGGCTATTTTTACGGAACCAGATGACCAAAGTGGCTGGTTTTATCATCTTTGGCTTCTTGACCAAACTCTTAATGTGGAGACTCCTCTTCTCACTTCCTCATGGCCTTCACATGGTTCAAGTATCATTCTGTCTGGAGCTGGGTGCTTGAGTGGCTCTTCATCTATGTTCACTACTTTTTGTTCTGAGTCGGGTTCTTTTCCACTGATTCTCTACTTTGACCAAGCTGTTGGTGGAGTAAGCTCATCTACTGTTACAATTGATTCTGAACTAAAAGGAAACGAGGGCCTTGTTTGGGAACCAATTCCGAACAAAAATTCTCAGGTGTCCTGTGTATGGGTTGCTCGTCTGAAATATGTCAGTTCAGATCCTTGCGAATACAAAGTGAAGATCAGAGTTGGGAACTCTCCAGGAATCGTTTCTTCCAGAGGATATAACTTCAACGCACCTTATGAGTTTGTCTTTACAGCCCATGTTCATGATACCGTCGAAGATTCTCAAGAAGGCATTGTTTCATGGACGGATGGATTTGATATTTGGGATGCGAAGTCAAAGGATTTGAATTCTCTTGTCACCTTGGATCGGTTAAATGCTGAGATGGATTTTAAATGGCGTCAGGAAGCTATAGATTCTGAGGTTGAATGTTTCGGTATACTGCCTGACAGCAAAATTGGAAAGCTCACTCTTGCAAGGCTTTTGATGGCTCGTGAAGCTATGGTATCGGATGATGCTGTCAAGGGTGTTCACTATGAAGAAATCCTTCAGCTGTATAACGATTTGATGGCGCTGGATTCTTCACACTACCAGTACTACAAGGATGAGCACAGCAAAGCTTTTCTCCACAAGGTGACTTCAAGCAGTGAATCTTTGTCAAGACACCTTTTGCGATATAGGGATATGAACAATCTTGTATGTCTACGGCTAAATAACTTATCACTATCTCGGATAGCCTCTGTTGAGAAGTTGCTGTTTGTCCAAATGTTAGACCTTAGTCACAATGAGCTTCATTCCACTGAAGGATTGGAGGCAATGCAACTTCTCTCTTGTCTAAATCTGAGTCACAACAGAATCCGGAGTTTTTCAGCGCTGGACTCTCTAAGACATGTGAAGCAGCTGAAAGTGTTGGATGTTTCACATAACCACATTGGCAAGCACTCAGTGGACACAACTAGATACCTTTGTTCTTCACCGCTCTCTAATTCAGAGTTGGGTCAGGATGATGTAGGAAAACAGAATCCTGGATTGGTTACGAAGTACTGGGATGCGTATTGCGTGTTAACAGATTTGAATCTGAAACAGTTAGATATAGCAGGAAATGAAATTGCAGGGGAGGAATTCAGCTCTTTTGTCCTCCAGGTTGTCCCAAAGCTTGTATGGCTCGATGGCCAGAAGAAACTTGGGAATTAGATCATAGGCCAAGTTTTTGTTTACTTTACCTTTCGATCATCAAATTCCCAAAGCAATTTAGGTTATCTTGATGATCTTTGTTGTTGTGATATTTCTTAGCAATCTTATTGATGACCTTTATTTACCAAATTTGGGTTGATATTTCCTAAAAATCTGAAT
CDS Sequence
Protein Sequence