Information report for AT4G24280
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
Literature and News
- Arabidopsis genes encoding components of the chloroplastic protein import apparatus. DOI: 10.1104/pp.125.4.1567 ; PMID: 11299338
- Comprehensive expression profile analysis of the Arabidopsis Hsp70 gene family. DOI: 10.1104/pp.126.2.789 ; PMID: 11402207
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction. DOI: 10.1105/tpc.010304 ; PMID: 11826309
- Rapid identification of Arabidopsis insertion mutants by non-radioactive detection of T-DNA tagged genes. DOI: 10.1046/j.1365-313x.2002.01416.x ; PMID: 12383089
- The Arabidopsis ppi1 mutant is specifically defective in the expression, chloroplast import, and accumulation of photosynthetic proteins. DOI: 10.1105/tpc.012955 ; PMID: 12897258
- a high-density colony array study (HDCA). DOI: 10.1046/j.1365-313x.2003.01847.x ; PMID: 12969430
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Analysis of the Arabidopsis nuclear proteome and its response to cold stress. DOI: 10.1046/j.1365-313x.2003.01907.x ; PMID: 14617066
- Target proteins of the cytosolic thioredoxins in Arabidopsis thaliana. DOI: 10.1093/pcp/pch019 ; PMID: 14749482
- When defense pathways collide. The response of Arabidopsis to a combination of drought and heat stress. DOI: 10.1104/pp.103.033431 ; PMID: 15047901
- Functional specialization amongst the Arabidopsis Toc159 family of chloroplast protein import receptors. DOI: 10.1105/tpc.104.023309 ; PMID: 15273297
- Transcriptional profiling by cDNA-AFLP and microarray analysis reveals novel insights into the early response to ethylene in Arabidopsis. DOI: 10.1111/j.1365-313X.2004.02156.x ; PMID: 15272873
- Patterns of protein oxidation in Arabidopsis seeds and during germination. DOI: 10.1104/pp.105.062778 ; PMID: 15908592
- Extracellular ATP functions as an endogenous external metabolite regulating plant cell viability. DOI: 10.1105/tpc.105.036806 ; PMID: 16199612
- Proteomic analysis and extensive protein identification from dry, germinating Arabidopsis seeds and young seedlings. DOI: 10.5483/bmbrep.2005.38.6.650 ; PMID: 16336779
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study. DOI: 10.1104/pp.106.080150 ; PMID: 16648217
- Downregulation of ClpR2 leads to reduced accumulation of the ClpPRS protease complex and defects in chloroplast biogenesis in Arabidopsis. DOI: 10.1105/tpc.106.042861 ; PMID: 16766689
- Novel subsets of the Arabidopsis plasmalemma phosphoproteome identify phosphorylation sites in secondary active transporters. DOI: 10.1016/j.bbrc.2007.08.177 ; PMID: 17869214
- Alternative and effective proteomic analysis in Arabidopsis. DOI: 10.1002/pmic.200700346 ; PMID: 17828791
- Core genome responses involved in acclimation to high temperature. DOI: 10.1104/pp.107.112060 ; PMID: 18055584
- and extracellular-sourced ROS on high light-responsive gene expression in Arabidopsis. DOI: 10.1093/jxb/erm289 ; PMID: 18212028
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- Genomic analysis of the Hsp70 superfamily in Arabidopsis thaliana. DOI: 10.1379/1466-1268(2001)006<0201:gaoths>2.0.co;2 ; PMID: 11599561
- Stromal Hsp70 is important for protein translocation into pea and Arabidopsis chloroplasts. DOI: 10.1105/tpc.109.071415 ; PMID: 20484004
- Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. DOI: 10.1104/pp.110.168120 ; PMID: 21139083
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Functional analysis of the Chloroplast GrpE (CGE) proteins from Arabidopsis thaliana. DOI: 10.1016/j.plaphy.2019.03.027 ; PMID: 30927692
- GUN1 influences the accumulation of NEP-dependent transcripts and chloroplast protein import in Arabidopsis cotyledons upon perturbation of chloroplast protein homeostasis. DOI: 10.1111/tpj.14585 ; PMID: 31648387
- 2-Hydroxymelatonin, Rather Than Melatonin, Is Responsible for RBOH-Dependent Reactive Oxygen Species Production Leading to Premature Senescence in Plants. DOI: 10.3390/antiox10111728 ; PMID: 34829600
- Regulation of heat shock proteins 70 and their role in plant immunity. DOI: 10.1093/jxb/erab549 ; PMID: 35022724
- Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction. DOI: 10.1105/tpc.010304 ; PMID: 11826309
- Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. DOI: 10.1021/pr034025j ; PMID: 12938931
- Analysis of the Arabidopsis nuclear proteome and its response to cold stress. DOI: 10.1046/j.1365-313x.2003.01907.x ; PMID: 14617066
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study. DOI: 10.1104/pp.106.080150 ; PMID: 16648217
- Analysis of the soluble ATP-binding proteome of plant mitochondria identifies new proteins and nucleotide triphosphate interactions within the matrix. DOI: 10.1021/pr060403j ; PMID: 17137349
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Heterogeneity of the mitochondrial proteome for photosynthetic and non-photosynthetic Arabidopsis metabolism. DOI: 10.1074/mcp.M700535-MCP200 ; PMID: 18385124
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. DOI: 10.1074/mcp.M500180-MCP200 ; PMID: 16207701
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178V345
- EMBL: CACRSJ010000109, LR881469, LUHQ01000004
- AlphaFoldDB: A0A178V345
- EnsemblPlants: AT4G24280.1
- Gramene: AT4G24280.1
- KEGG: ath:AT4G24280
- Orthologous matrix: ENAKCEL
- ExpressionAtlas: AT4G24280
- InterPro: IPR012725, IPR013126, IPR018181
- PANTHER: PTHR19375
- SUPFAM: SSF100920, SSF100934, SSF53067
- PROSITE: PS00297, PS00329, PS01036
- Gene3D: 1.20.1270.10, 2.60.34.10, 3.30.420.40
- SWISS-MODEL: A0A178V345
- Conserved Domain Database: cd10234
Sequences
cDNA Sequence
- >AT4G24280.1
GTGGGCTTTAGTGAAAAGTGTAGATGTTTCTCACCACAAGTCTCTAGTAATGGGTGTCAAACTCACAAACACTTGTTGGCCTATTGAAGCCCATCCATCTTCTCTTCTCGAAACTTCAAGTGGGGTCCACAATTTCTCTCCCTCTTTCTCCCACCTTCCTCTTATCTTCTCTGCCTTCTATATCTCTTCCTCCTACTTTCCCTTAGGGTTTTTCAGCTTCAAACCCTCCTTGCACTCTCCGCTTCCCTCCGTTACCTTTACTTCTCTATTGCTTAGCTCGAAAAATGGCATCTTCAGCCGCCCAAATCCACGTTCTCGGCGGAATTGGATTCGCTTCTTCTTCTTCTTCCAAGAGAAATCTCAATGGTAAAGGCGGTACCTTTATGCCGAGAAGTGCCTTCTTCGGTACAAGAACCGGTCCTTTCTCCACACCCACTTCTGCTTTTCTCAGAATGGGCACCAGAAATGGCGGCGGCGCTTCTAGATACGCGGTTGGTCCGGTTCGTGTGGTTAACGAGAAGGTTGTTGGAATTGATTTGGGTACGACTAACTCTGCAGTAGCTGCTATGGAAGGAGGTAAGCCTACGATTGTGACTAACGCTGAAGGTCAGAGGACAACGCCTTCTGTTGTGGCTTACACGAAGAGTGGTGATAGGCTTGTTGGGCAGATTGCGAAGAGGCAAGCTGTTGTTAATCCCGAGAATACTTTCTTCTCAGTGAAGAGGTTTATTGGTAGGAAGATGAACGAGGTTGATGAAGAGTCTAAGCAGGTTTCTTACAGAGTTGTTAGAGATGAGAACAATAATGTTAAGCTTGAGTGTCCTGCCATTAACAAACAATTTGCTGCTGAGGAGATTTCAGCTCAGGTTCTAAGGAAACTTGTGGATGATGCATCAAGATTCTTGAACGACAAAGTAACCAAGGCTGTCATCACTGTGCCTGCTTACTTCAACGATTCACAGAGGACAGCTACAAAAGATGCTGGTCGAATTGCTGGGTTGGAAGTTCTTCGTATTATCAATGAGCCCACAGCTGCTTCATTGGCTTATGGGTTTGACAGAAAAGCCAATGAAACAATCCTAGTCTTCGATCTTGGTGGTGGTACCTTTGATGTCTCAGTGCTTGAGGTTGGTGATGGTGTGTTTGAAGTGCTTTCCACTTCTGGCGACACACACTTGGGTGGTGATGACTTTGACAAGAGAGTTGTTGATTGGCTTGCTGCAGAATTCAAGAAAGACGAAGGGATAGATCTTCTGAAAGACAAGCAAGCTCTTCAGAGGTTAACAGAGGCAGCAGAAAAAGCTAAAATTGAGCTTTCTTCACTGACTCAGACAAATATGAGCTTACCTTTTATCACGGCCACAGCTGATGGACCTAAACACATAGAAACCACCCTCACACGTGCCAAGTTCGAAGAATTGTGTTCAGATTTACTTGACAGGGTCAGGACTCCTGTCGAGAATTCCCTGCGGGATGCAAAGCTCAGCTTCAAAGATATTGATGAAGTCATCCTTGTCGGTGGATCCACACGTATTCCTGCTGTTCAGGAACTCGTGAGGAAGGTGACTGGGAAAGAACCTAATGTTACAGTAAATCCTGACGAGGTTGTAGCGTTAGGTGCTGCAGTCCAGGCTGGTGTTCTTGCTGGAGATGTGAGTGACATTGTGCTTCTTGATGTGACACCGCTTTCGATTGGTTTGGAGACCCTAGGTGGTGTTATGACTAAGATTATTCCAAGGAACACCACACTGCCTACTTCTAAATCAGAAGTCTTTTCAACTGCTGCTGATGGACAGACAAGTGTTGAGATTAATGTGTTGCAGGGTGAGAGGGAGTTTGTTAGGGATAACAAGTCTCTTGGTAGCTTCCGTCTAGATGGTATCCCCCCTGCACCACGTGGAGTTCCACAAATCGAAGTCAAATTTGACATTGATGCCAATGGAATTCTATCTGTCAGTGCTGTTGACAAGGGCACAGGAAAGAAGCAAGACATCACCATTACTGGCGCAAGTACATTGCCCAAGGATGAGGTAGACCAAATGGTCCAGGAGGCAGAAAGATTTGCAAAAGATGACAAAGAGAAGAGAGACGCAATCGACACGAAAAACCAAGCAGATTCAGTGGTGTACCAGACAGAGAAGCAACTGAAAGAACTAGGAGAGAAAATTCCAGGTGAAGTGAAAGAGAAGGTGGAGGCTAAGCTACAAGAGCTGAAAGACAAGATAGGAAGTGGATCAACCCAAGAAATCAAAGACGCCATGGCTGCTCTTAACCAAGAAGTGATGCAGATTGGTCAGTCTCTATACAACCAGCCTGGAGCTGGAGGTCCAGGTGCAGGTCCTTCCCCGGGAGGCGAAGGTGCTTCATCAGGAGATTCATCTTCAAGTAAAGGAGGAGATGGTGATGATGTGATCGATGCTGACTTCACAGACAGCCAATGAGAAAACAAACTAGGAAGGCTTTGGAATTCATACATGGGATGCGATGGGAGAGACAAATGATTTTGTAGGTTGGATTTGAGAACACAAATGAATTTAAGCAATGCTTGTGGACAACATTTATTTGTCGTTAGAAGGAAGCAGTGTGGTTACAGAGGATGATGTTTAATACATAATAATATGCAAGCCTTCTCTTACACGGTACTTGCGGATACACACAAAATGTACAAAGTGGGGGCTTTTGAAGCAATCCTCCGCAATTATAGTGACTCAAACCTTAAAATGCTTTTGGTCATTAACTTTGTACTTTTTTTGGTATCCAATTATAGCGACTCAATCAATCTGAGACTATCCAACGCAATTTTA
CDS Sequence
Protein Sequence