Gene Details:
- Gene ID: AT4G24260
- Gene Symbol: ATGH9A3, AtKOR3, GH9A3, KOR3
- Gene Name: glycosyl hydrolase 9A3, glycosyl hydrolase 9A3
- Description: glycosyl hydrolase 9A3;(source:Araport11)
- TAIR Accession: locus:2135997
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0005634 — located in — nucleus
- GO:0009624 — acts upstream of or within — response to nematode
- GO:0008810 — enables — cellulase activity
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Two Arabidopsis thaliana genes, KOR2 and KOR3, which encode membrane-anchored endo-1,4-beta-D-glucanases, are differentially expressed in developing leaf trichomes and their support cells. DOI: 10.1023/a:1010688726755 ; PMID: 11488474
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Phylogenetic analysis of the plant endo-beta-1,4-glucanase gene family. DOI: 10.1007/s00239-003-2571-x ; PMID: 15170254
- Structural organization and a standardized nomenclature for plant endo-1,4-beta-glucanases (cellulases) of glycosyl hydrolase family 9. DOI: 10.1104/pp.107.102574 ; PMID: 17687051
- Manipulation of two α-endo-β-1,4-glucanase genes, AtCel6 and GmCel7, reduces susceptibility to Heterodera glycines in soybean roots. DOI: 10.1111/mpp.12157 ; PMID: 24844661
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Arabidopsis endo-1,4-beta-glucanases are involved in the formation of root syncytia induced by Heterodera schachtii. DOI: 10.1111/j.1365-313X.2007.03340.x ; PMID: 18069944
Sequences:
cDNA Sequence
- >AT4G24260.3
TCTGACGTTAAAACATTACCCAAAACAACAAAGTGGGCCTACGGACCAAATTCCAGCTATAAAATAATTAAAGTAATATTTTTAAAAAAGGACATAAAGTCCAATGCACGACCGAATGAATTCCACGTGGCAAAATACTGAGTTAACTTACACTTCTTCACTTGCACTTTCCACATCACACACGCCTCACTTACCCTAAAACCACAGGAACACTCCAAAACTCTTCCTCTTCCTCTTCCCTCAGAAATTTCAGCAAATCTCATCGGATTTTGACTGATCATTATGTACGGACGTGATCCATGGGGTGGTCCTCTAGAGATCAATGCGGCGGACTCCATGACAGACGACGATCGTAGTCGAAACCTACAAGACCTTGACCGTGCGACTCCTTCGCGGCCACTCGACGAAACGCAACAGAGTTGGCTTCTTGGACCAAAAGTGCTTAAGAAGAAAAAGTACGTCGATCTTGGATGTATCTTAGTCAGCCGTAAGATCTTTCTTTGGACTCTTGGAACCATTGTAGTAACTGCTCTTCTCTCTGGATTCATAACTTTGATCGTTAAAACATTGCCACACCACCACCACAAGGAACCACCACCGGATAATTACACTATCGCTCTCCGTACAGCTCTCAAGTTCTTCAATGCTCAACAATCTGGGAAACTTCCAAAGAACATTTATAATGTATCATGGAGGCATGATTCTTGTCTACAAGATGGTAAGGGAGATCCAGGACAATGCTACAAAGATTTGGTAGGAGGTTACTATGATGCTGGAGATTCTATCAAATTCAACTTCCCAATGTCTTATGCTATGACTATGTTGAGCTGGAGTGTAATCGAATACAGCGCAAAGTACCAAGCTGCTGGCGAGCTTGAACATGTTAAAGAACTCATCAAATGGGGAACTGACTACTTTCTCAAGACTTTCAATAGTAGTGCTGATAACATCTATGTTATGGTGGAACAGGTCGGATCTGGAGTTAGCGGTAGAGGAAGTGAATTGCACAATGACCATTACTGTTGGATGCGTCCTGAGGATATTCATTATAAAAGGACTGTATCTCAATGTTACAGTAGCTGCTCTGATCTTGCTGCAGAGATGGCAGCTGCTCTGGCTTCTGCATCCATTGTATTCAAGGACAACAGATTATATTCGAAAAATCTTGTTCATGGTGCTAAGACGCTTTATAGGTTTGCAACTACTTCTAGGAATAGATACAGTCAAAATGGTAAAGAGTCTAGCAAATTTTATAACTCTAGCATGTTTGAGGATGAGCTATTATGGGGTGGTGCTTGGCTGTATTATGCTACTGGAAATGTAACTTATCTAGAACGAGTTACCAGTCACCACATGGCTGAGAAAGCTGGTGCCTTCGGGAATAGTCCTTATTATGGCGTATTTAGCTGGGACAACAAGCTTCCAGGGGCTCAGTTGCTGTTAACACGGATGAGGCTGTTTCTGAGCCCTGGATATCCATATGAAGACATGTTAAGCGAATTTCATAACCAAACAGGCAGAGTTATGTGCTCTTACTTGCCTTATTACAAGAAATTTAACAGAACCAATGGAGGTTTGATTCAGTTGAACCATGGAGCTCCACAGCCTCTTCAATATGTTGCAAATGCGGCTTTCTTAGCGGCACTATTCAGTGATTATCTAGAGGCTGCTGATACTCCCGGATGGTACTGTGGTCCTAACTTCTATACTACTGAATTCCTACGCAACTTTTCAAGATCGCAGGTATGATTCACAAATGAAGGAAAACAAACAAGATTTTGAAGGAGCTTATCTGATGGAACTTTGTGTCTTT - >AT4G24260.2
TCTGACGTTAAAACATTACCCAAAACAACAAAGTGGGCCTACGGACCAAATTCCAGCTATAAAATAATTAAAGTAATATTTTTAAAAAAGGACATAAAGTCCAATGCACGACCGAATGAATTCCACGTGGCAAAATACTGAGTTAACTTACACTTCTTCACTTGCACTTTCCACATCACACACGCCTCACTTACCCTAAAACCACAGGAACACTCCAAAACTCTTCCTCTTCCTCTTCCCTCAGAAATTTCAGCAAATCTCATCGGATTTTGACTGATCATTATGTACGGACGTGATCCATGGGGTGGTCCTCTAGAGATCAATGCGGCGGACTCCATGACAGACGACGATCGTAGTCGAAACCTACAAGACCTTGACCGTGCGACTCCTTCGCGGCCACTCGACGAAACGCAACAGAGTTGGCTTCTTGGACCAAAAGTGCTTAAGAAGAAAAAGTACGTCGATCTTGGATGTATCTTAGTCAGCCGTAAGATCTTTCTTTGGACTCTTGGAACCATTGTAGTAACTGCTCTTCTCTCTGGATTCATAACTTTGATCGTTAAAACATTGCCACACCACCACCACAAGGAACCACCACCGGATAATTACACTATCGCTCTCCGTACAGCTCTCAAGTTCTTCAATGCTCAACAATCTGGGAAACTTCCAAAGAACATTTATAATGTATCATGGAGGCATGATTCTTGTCTACAAGATGGTAAGGGAGATCCAGGACAATGCTACAAAGATTTGGTAGGAGGTTACTATGATGCTGGAGATTCTATCAAATTCAACTTCCCAATGTCTTATGCTATGACTATGTTGAGCTGGAGTGTAATCGAATACAGCGCAAAGTACCAAGCTGCTGGCGAGCTTGAACATGTTAAAGAACTCATCAAATGGGGAACTGACTACTTTCTCAAGACTTTCAATAGTAGTGCTGATAACATCTATGTTATGGTGGAACAGGTCGGATCTGGAGTTAGCGGTAGAGGAAGTGAATTGCACAATGACCATTACTGTTGGATGCGTCCTGAGGATATTCATTATAAAAGGACTGTATCTCAATGTTACAGTAGCTGCTCTGATCTTGCTGCAGAGATGGCAGCTGCTCTGGCTTCTGCATCCATTGTATTCAAGGACAACAGATTATATTCGAAAAATCTTGTTCATGGTGCTAAGACGCTTTATAGGTTTGCAACTACTTCTAGGAATAGATACAGTCAAAATGGTAAAGAGTCTAGCAAATTTTATAACTCTAGCATGTTTGAGGATGAGCTATTATGGGGTGGTGCTTGGCTGTATTATGCTACTGGAAATGTAACTTATCTAGAACGAGTTACCAGTCACCACATGGCTGAGAAAGCTGGTGCCTTCGGGAATAGTCCTTATTATGGCGTATTTAGCTGGGACAACAAGCTTCCAGGGGCTCAGTTGCTGTTAACACGGATGAGGCTGTTTCTGAGCCCTGGATATCCATATGAAGACATGTTAAGCGAATTTCATAACCAAACAGGCAGAGTTATGTGCTCTTACTTGCCTTATTACAAGAAATTTAACAGAACCAATGGAGGTTTGATTCAGTTGAACCATGGAGCTCCACAGCCTCTTCAATATGTTGCAAATGCGGCTTTCTTAGCGGCACTATTCAGTGATTATCTAGAGGCTGCTGATACTCCCGGATGGTACTGTGGTCCTAACTTCTATACTACTGAATTCCTACGCAACTTTTCAAGATCGCAGGTATGATTCACAAATGAAGGAAAACAAACAAGATTTTGAAGGAGCTTATCTGATGGAACTTTGTGTCTTT - >AT4G24260.1
TCTGACGTTAAAACATTACCCAAAACAACAAAGTGGGCCTACGGACCAAATTCCAGCTATAAAATAATTAAAGTAATATTTTTAAAAAAGGACATAAAGTCCAATGCACGACCGAATGAATTCCACGTGGCAAAATACTGAGTTAACTTACACTTCTTCACTTGCACTTTCCACATCACACACGCCTCACTTACCCTAAAACCACAGGAACACTCCAAAACTCTTCCTCTTCCTCTTCCCTCAGAAATTTCAGCAAATCTCATCGGATTTTGACTGATCATTATGTACGGACGTGATCCATGGGGTGGTCCTCTAGAGATCAATGCGGCGGACTCCATGACAGACGACGATCGTAGTCGAAACCTACAAGACCTTGACCGTGCGACTCCTTCGCGGCCACTCGACGAAACGCAACAGAGTTGGCTTCTTGGACCAAAAGTGCTTAAGAAGAAAAAGTACGTCGATCTTGGATGTATCTTAGTCAGCCGTAAGATCTTTCTTTGGACTCTTGGAACCATTGTAGTAACTGCTCTTCTCTCTGGATTCATAACTTTGATCGTTAAAACATTGCCACACCACCACCACAAGGAACCACCACCGGATAATTACACTATCGCTCTCCGTACAGCTCTCAAGTTCTTCAATGCTCAACAATCTGGGAAACTTCCAAAGAACATTTATAATGTATCATGGAGGCATGATTCTTGTCTACAAGATGGTAAGGGAGATCCAGGACAATGCTACAAAGATTTGGTAGGAGGTTACTATGATGCTGGAGATTCTATCAAATTCAACTTCCCAATGTCTTATGCTATGACTATGTTGAGCTGGAGTGTAATCGAATACAGCGCAAAGTACCAAGCTGCTGGCGAGCTTGAACATGTTAAAGAACTCATCAAATGGGGAACTGACTACTTTCTCAAGACTTTCAATAGTAGTGCTGATAACATCTATGTTATGGTGGAACAGGTCGGATCTGGAGTTAGCGGTAGAGGAAGTGAATTGCACAATGACCATTACTGTTGGATGCGTCCTGAGGATATTCATTATAAAAGGACTGTATCTCAATGTTACAGTAGCTGCTCTGATCTTGCTGCAGAGATGGCAGCTGCTCTGGCTTCTGCATCCATTGTATTCAAGGACAACAGATTATATTCGAAAAATCTTGTTCATGGTGCTAAGACGCTTTATAGGTTTGCAACTACTTCTAGGAATAGATACAGTCAAAATGGTAAAGAGTCTAGCAAATTTTATAACTCTAGCATGTTTGAGGATGAGCTATTATGGGGTGGTGCTTGGCTGTATTATGCTACTGGAAATGTAACTTATCTAGAACGAGTTACCAGTCACCACATGGCTGAGAAAGCTGGTGCCTTCGGGAATAGTCCTTATTATGGCGTATTTAGCTGGGACAACAAGCTTCCAGGGGCTCAGTTGCTGTTAACACGGATGAGGCTGTTTCTGAGCCCTGGATATCCATATGAAGACATGTTAAGCGAATTTCATAACCAAACAGGCAGAGTTATGTGCTCTTACTTGCCTTATTACAAGAAATTTAACAGAACCAATGGAGGTTTGATTCAGTTGAACCATGGAGCTCCACAGCCTCTTCAATATGTTGCAAATGCGGCTTTCTTAGCGGCACTATTCAGTGATTATCTAGAGGCTGCTGATACTCCCGGATGGTACTGTGGTCCTAACTTCTATACTACTGAATTCCTACGCAACTTTTCAAGATCGCAGGTATGATTCACAAATGAAGGAAAACAAACAAGATTTTGAAGGAGCTTATCTGATGGAACTTTGTGTCTTT
CDS Sequence
Protein Sequence