Gene Details:
- Gene ID: AT4G24110
- Gene Symbol: HUP40
- Gene Name: HYPOXIA RESPONSE UNKNOWN PROTEIN 40
- Description: NADP-specific glutamate dehydrogenase;(source:Araport11)
- TAIR Accession: locus:2134946
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Gene Ontology:
- GO:0098542 — acts upstream of or within — defense response to other organism
- GO:0071456 — acts upstream of or within — cellular response to hypoxia
- GO:0009409 — acts upstream of or within — response to cold
- GO:0009753 — acts upstream of or within — response to jasmonic acid
- GO:0021700 — acts upstream of or within — developmental maturation
- GO:0048316 — acts upstream of or within — seed development
- GO:0042742 — acts upstream of or within — defense response to bacterium
- GO:0007165 — acts upstream of or within — signal transduction
- GO:0006979 — acts upstream of or within — response to oxidative stress
- GO:0010035 — acts upstream of or within — response to inorganic substance
- GO:0003674 — enables — molecular_function
- GO:0014070 — acts upstream of or within — response to organic cyclic compound
- GO:0001666 — acts upstream of or within — response to hypoxia
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0050832 — acts upstream of or within — defense response to fungus
- GO:0010431 — acts upstream of or within — seed maturation
- GO:0045087 — acts upstream of or within — innate immune response
- GO:0009408 — acts upstream of or within — response to heat
- GO:0031347 — acts upstream of or within — regulation of defense response
- GO:0031348 — acts upstream of or within — negative regulation of defense response
- GO:0005737 — colocalizes with — cytoplasm
- GO:0009790 — acts upstream of or within — embryo development
- GO:0033993 — acts upstream of or within — response to lipid
Function-related keywords:
- shoot axis apex , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , hypocotyl , leaf apex , collective leaf structure
Literature:
- The use of microarrays to study the anaerobic response in Arabidopsis. DOI: 10.1093/aob/mci218 ; PMID: 16033780
- Functional genomic analysis of the AUXIN/INDOLE-3-ACETIC ACID gene family members in Arabidopsis thaliana. DOI: 10.1105/tpc.105.036723 ; PMID: 16284307
- Detoxification of the explosive 2,4,6-trinitrotoluene in Arabidopsis: discovery and C-glucosyltransferases. DOI: 10.1111/j.1365-313X.2008.03653.x ; PMID: 18702669
- Karrikins enhance light responses during germination and seedling development in Arabidopsis thaliana. DOI: 10.1073/pnas.0911635107 ; PMID: 20351290
- An RK/ST C-Terminal Motif is Required for Targeting of OEP7.2 and a Subset of Other Arabidopsis Tail-Anchored Proteins to the Plastid Outer Envelope Membrane. DOI: 10.1093/pcp/pcy234 ; PMID: 30521026
- Ethylene-mediated nitric oxide depletion pre-adapts plants to hypoxia stress. DOI: 10.1038/s41467-019-12045-4 ; PMID: 31488841
- Integrative Analysis from the Epigenome to Translatome Uncovers Patterns of Dominant Nuclear Regulation during Transient Stress. DOI: 10.1105/tpc.19.00463 ; PMID: 31519798
- New function of Hypoxia-responsive unknown protein in enhanced resistance to biotic stress. DOI: 10.1080/15592324.2020.1868131 ; PMID: 33369516
Sequences:
cDNA Sequence
- >AT4G24110.1
TTCAAACAAAACAGAAGTCACAAGTCGCCACCTTTCTCTATGATGTTTCCCTCTTAAAAAGGCCGATCCTTTCACAAGTTTTTAGATCAAAGTCTACGAGAAACAGAGAGTTTTCTAACGAACCCAAAATACAGAAATGTGTAGGTCGCCCGATTTCGAGCGTTATGTCGAGAAAGAGAGCTTAAAGGTTAAAGCTTTCTTCGTCCGGTTCACAGGTTTACCCACCCGAGGATTCTTACCGGATTCTCTCACTCTTCTCTACCCACCACGAATCAACGAAGCTGCTTTCGAGCTTGATGGGTCCAAGATCCGACCCGATTCCCCAGCTTTCGTGACGCTTCACAGAGTCGTGAAAGGAGGAGACGTGATTTACGGGTCAAGAGAACGTGTTCGGGTCTGGGAAGGGATCCGCTTCGAGGTGTACATGAGTGAGGAGAGGGTGATAAAAGGTATTTTCAGAAAAGACGAAGGAGACAAGTGGAAACTTGAGTGCGAGTGTGAGATGGAAGAGGAAGGAGCGGCGGAAGTTGTTGTTGCGGCGGAGGGACACGTGGCAACAGCGACGATGGCGAGGAAACATAGAAGAAGGAGAAAGCAAAAGATTGGGTTTGAGTGTTTGGAGGAGATACCGGAGGAGAGAGAGGAAGGGAGGGATTCTGACGGCGGCGTGTGTTTTTGCACGTGTAGCGGCGAATCTGACGACGGAGAGGGAGAGTGGGAAGAGGTGGAATGGACGGCTGAGATGGAGTCTGAGACAGAAGGAATGGGATGGGCCGTAGATTTGGGGATTTGGGTTATGTGTTTGGGTGTGGGCTATTTAGTGTCTAAAGCCTCTACCAAAACCTTGACAAGTGGGAGAAGAAGAAGGACAAGAAGAACCTTCTTCTAATTCCTTGTGTAATCAATCAATCAGTGTAATTGTACAATAACGTTGGAACATAAATGTAAAAAAACCATGATTTTGATTACAATAGTCGAGAGTTCATTTTTCT
CDS Sequence
Protein Sequence