Gene Details:

• Gene ID: AT4G23980
• Gene Symbol: ARF9
• Gene Name: auxin response factor 9
• Description: auxin response factor 9;(source:Araport11)
• TAIR Accession: locus:2138096
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT4G23980.1     AT4G23980.2

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020038  — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0020137  — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)

Gene Ontology:

• GO:0005515  — enables — protein binding
• GO:0000976  — enables — transcription cis-regulatory region binding
• GO:0005634  — located in — nucleus
• GO:0006355  — involved in — regulation of DNA-templated transcription
• GO:0003700  — enables — DNA-binding transcription factor activity
• GO:0006355  — acts upstream of or within — regulation of DNA-templated transcription

Function-related keywords:

• shoot axis apex ,  leaf lamina base ,  shoot system ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  inflorescence flower pedicel ,  cotyledon ,  petiole ,  hypocotyl ,  leaf apex ,  collective leaf structure ,  pollen

Literature:

• Activation and repression of transcription by auxin-response factors.   DOI:  10.1073/pnas.96.10.5844 ;  PMID:  10318972
• ARF1, a transcription factor that binds to auxin response elements.   DOI:  10.1126/science.276.5320.1865 ;  PMID:  9188533
• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• The Arabidopsis transcription factor HY5 integrates light and hormone signaling pathways.   DOI:  10.1111/j.1365-313X.2004.02052.x ;  PMID:  15078335
• A key factor of translation reinitiation, ribosomal protein L24, is involved in gynoecium development in Arabidopsis.   DOI:  10.1042/BST0320611 ;  PMID:  15270688
• Contrasting modes of diversification in the Aux/IAA and ARF gene families.   DOI:  10.1104/pp.104.039669 ;  PMID:  15247399
• Common functions for diverse small RNAs of land plants.   DOI:  10.1105/tpc.107.051706 ;  PMID:  17601824
• Cell-specific nitrogen responses mediate developmental plasticity.   DOI:  10.1073/pnas.0709559105 ;  PMID:  18180456
• The microRNA miR393 re-directs secondary metabolite biosynthesis away from camalexin and towards glucosinolates.   DOI:  10.1111/j.1365-313X.2011.04591.x ;  PMID:  21457368
• Different auxin response machineries control distinct cell fates in the early plant embryo.   DOI:  10.1016/j.devcel.2011.10.026 ;  PMID:  22264733
• Promoter-based integration in plant defense regulation.   DOI:  10.1104/pp.114.248716 ;  PMID:  25352272
• An Arabidopsis gene regulatory network for secondary cell wall synthesis.   DOI:  10.1038/nature14099 ;  PMID:  25533953
• Endogenous Arabidopsis messenger RNAs transported to distant tissues.   DOI:  10.1038/nplants.2015.25 ;  PMID:  27247031
• Long-Chain Polyisoprenoids Are Synthesized by AtCPT1 in Arabidopsis thaliana.   DOI:  10.3390/molecules24152789 ;  PMID:  31370240
• Transcriptional regulation of nitrogen-associated metabolism and growth.   DOI:  10.1038/s41586-018-0656-3 ;  PMID:  30356219
• A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis.   DOI:  10.1105/tpc.19.00562 ;  PMID:  31806676
• Activation and repression of transcription by auxin-response factors.   DOI:  10.1073/pnas.96.10.5844 ;  PMID:  10318972
• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137

Sequences: