Gene Details:
- Gene ID: AT4G23940
- Gene Symbol: ARC1, FtsHi1
- Gene Name: ACCUMULATION AND REPLICATION OF CHLOROPLASTS 1, FTSH inactive protease 1
- Description: FtsH extracellular protease family;(source:Araport11)
- TAIR Accession: locus:2138146
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Gene Ontology:
- GO:0009658 — acts upstream of or within — chloroplast organization
- GO:0009941 — located in — chloroplast envelope
- GO:0043572 — involved in — plastid fission
- GO:0009706 — located in — chloroplast inner membrane
- GO:0005515 — enables — protein binding
- GO:0005886 — located in — plasma membrane
- GO:0004222 — enables — metalloendopeptidase activity
- GO:0009507 — located in — chloroplast
- GO:0009534 — is active in — chloroplast thylakoid
- GO:0016464 — enables — chloroplast protein-transporting ATPase activity
- GO:0016887 — enables — ATP hydrolysis activity
- GO:0009793 — involved in — embryo development ending in seed dormancy
- GO:0004176 — enables — ATP-dependent peptidase activity
- GO:0006508 — involved in — proteolysis
- GO:0005829 — located in — cytosol
- GO:0062091 — part of — Ycf2/FtsHi complex
- GO:0010020 — involved in — chloroplast fission
- GO:0045037 — acts upstream of or within — protein import into chloroplast stroma
- GO:0010020 — acts upstream of or within — chloroplast fission
- GO:0009536 — located in — plastid
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure
Literature:
- The distinctive roles of five different ARC genes in the chloroplast division process in Arabidopsis. DOI: 10.1046/j.1365-313x.1999.00500.x ; PMID: 10417716
- The gene complement for proteolysis in the cyanobacterium Synechocystis sp. PCC 6803 and Arabidopsis thaliana chloroplasts. DOI: 10.1007/s00294-002-0309-8 ; PMID: 12185496
- A Genetic Analysis of Chloroplast Division and Expansion in Arabidopsis thaliana. DOI: 10.1104/pp.104.1.201 ; PMID: 12232072
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- The Arabidopsis FtsH metalloprotease gene family: interchangeability of subunits in chloroplast oligomeric complexes. DOI: 10.1111/j.1365-313x.2003.02014.x ; PMID: 14996218
- Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. DOI: 10.1104/pp.103.034736 ; PMID: 15047898
- AtNAC2, a transcription factor downstream of ethylene and auxin signaling pathways, is involved in salt stress response and lateral root development. DOI: 10.1111/j.1365-313X.2005.02575.x ; PMID: 16359384
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- FtsH proteases located in the plant chloroplast. DOI: 10.1111/j.1399-3054.2011.01548.x ; PMID: 22121866
- Analysis of essential Arabidopsis nuclear genes encoding plastid-targeted proteins. DOI: 10.1371/journal.pone.0073291 ; PMID: 24023856
- Nitrogen remobilization during leaf senescence: lessons from Arabidopsis to crops. DOI: 10.1093/jxb/erw365 ; PMID: 27707774
- Plastidial NAD-Dependent Malate Dehydrogenase: A Moonlighting Protein Involved in Early Chloroplast Development through Its Interaction with an FtsH12-FtsHi Protease Complex. DOI: 10.1105/tpc.18.00121 ; PMID: 29934433
- A Ycf2-FtsHi Heteromeric AAA-ATPase Complex Is Required for Chloroplast Protein Import. DOI: 10.1105/tpc.18.00357 ; PMID: 30309901
- Reduced expression of the proteolytically inactive FtsH members has impacts on the Darwinian fitness of Arabidopsis thaliana. DOI: 10.1093/jxb/erz004 ; PMID: 30721974
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Abundance of metalloprotease FtsH12 modulates chloroplast development in Arabidopsis thaliana. DOI: 10.1093/jxb/eraa550 ; PMID: 33216923
- Characterization of the amidoxime reducing components ARC1 and ARC2 from Arabidopsis thaliana. DOI: 10.1111/febs.16450 ; PMID: 35366369
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Sequences:
cDNA Sequence
- >AT4G23940.1
ATGGCGTCTATAGACAATGTTTTCTCACTCGGTACTCGGTTCTCAATCCCAGAAAACCCCAAGAGATCGATATTGAAACACGCGACTACATCGAGTTTCTCCGCGAGAACTCAAACTCGATGGAGAGCTCCAATTCTGCGTCGGTCGTTTACAGTTTTGTGCGAATTGAAAACTGGGTCATCTAGCTCCGGCGAGACGAACAATTCCCCTGCTGCTGACGATTTCGTAACTAGGGTTTTGAAGGAGAATCCTAGCCAAGTGGAACCTCGTTACCGAGTTGGTGATAAGCTGTATAATCTGAAGGAGAGAGAAGATTTAAGCAAAGGCACCAATGCGGCGACGGGTGCGTTTGAATTTATCAAAAGGAAGTTTGATTCGAAGAAGAAAACAGAGACAGACAAAAGCGAAGAGTCTGTTTATTTGAGTGATATTTTGAGGGAGTACAAAGGAAAGCTTTATGTTCCGGAGCAAGTTTTTGGGCCAGAGTTATCTGAAGAAGAGGAGTTTGAGAAAAATGTGAAAGATTTACCAAAGATGAGTTTGGAAGATTTTAGAAAAGCTATGGAGAATGATAAAGTTAAGCTGCTTACATCGAAGGAAGTTTCTGGTGTTTCTTATACGAGTGGCTATAGAGGTTTTATTGTTGATCTTAAGGAGATTCCTGGAGTCAAGAGCTTACAGAGAACCAAATGGTCAATGAAGCTTGAAGTTGGAGAAGCTCAAGCTCTTCTGAAAGAATACACGGGTCCGCAGTACGAAATTGAAAGGCACATGACGTCTTGGGTTGGAAAAGTGGCGGACTTCCCAAACCCTGTTGCGTCTTCTATTTCAAGTAGAGTGATGGTTGAGCTGGGAATGGTGACAGCAGTTATTGCTGCAGCCGCAGTTGTTGTTGGAGGATTCTTAGCCTCAGCTGTTTTTGCAGTCACTAGTTTCGCCTTTGTCACTACAGTATATGTTGTTTGGCCTATAGCAAAGCCATTCCTCAAACTTTTTGTTGGCGTCTTCCTTGGTGTTCTTGAAAAATCATGGGATTACATTGTTGATGTTCTCGCCGATGGGGGCATCTTCTCAAGGATTTCTGATTTCTATACATTTGGTGGTGTAGCATCAAGTCTGGAGATGCTCAAACCAATCCTACTTGTTGTCATGACTATGGTTCTTCTTGTTCGTTTCACACTGTCACGGAGACCAAAGAACTTTAGGAAATGGGATTTATGGCAAGGGATTGCTTTTTCTCAGTCTAAAGCAGAAGCTCGTGTTGATGGTTCAACCGGTGTTAAATTCGCTGATGTTGCAGGGATTGATGAAGCAGTTGATGAACTTCAAGAGCTTGTAAAGTACTTGAAGAATCCCGACCTGTTTGATAAAATGGGAATTAAACCTCCCCATGGAGTTCTTCTGGAGGGTCCCCCTGGTTGTGGCAAGACACTCGTTGCAAAAGCCATTGCGGGGGAAGCTGGTGTACCGTTCTACCAAATGGCAGGATCTGAATTCGTCGAAGTTCTTGTTGGAGTTGGGTCAGCTCGTATCAGAGATCTGTTTAAAAGAGCTAAGGTAAACAAGCCATCCGTTATTTTCATCGATGAAATTGATGCCTTAGCAACTCGACGTCAAGGGATTTTCAAGGAAAACTCAGACCAGTTGTACAATGCGGCCACACAAGAAAGAGAAACCACATTGAACCAGCTACTCATCGAGCTTGATGGTTTTGACACAGGCAAAGGTGTGATTTTCTTGGGTGCCACCAATCGCAGAGATTTGTTAGACCCTGCTCTTCTACGTCCAGGTCGATTTGATCGAAAGATAAGAGTCCGTCCCCCTAATGCGAAAGGGAGATTGGATATTCTGAAGATTCATGCCAGCAAAGTCAAGATGTCGGATTCTGTTGACTTATCATCTTATGCAAGTAACTTACCAGGATGGTCCGGAGCAAAACTGGCACAGTTGGTTCAAGAGGCTGCTCTTGTAGCTGTCAGGAAAACGCATAACTCGATTCTTCAATCAGACATGGACGACGCTGTGGACCGACTCACTGTTGGTCCGACACGTATTGGTTTAGAATTGGGACATCAAGGTCAGTGTCGTAGAGCCACAACTGAAGTCGGAGTGGCAATCACTTCACATCTTTTATTGCGGTATGAGAATGCAAAGATTGAGCGGTGCGATCGCGTTTCTATCATTCCTCGTGGTCAGACACTGTCTCAAGTTGTGTTTCATCGGCTTGATGATGAGTCCTACATGTTTGGTCGTCTTCCACAACTGCTTCATCGTCTTCAGGTCTTGCTCGGAGGAAGAGCTGCAGAAGAAGTGATCTACGGTTCAGATACTTCAAAGGCATCAGTCGATTATCTCTCTGACGCCTCATGGCTAGCTCGTAAAATCTTAACCATATGGAACCTGGAGAACCCAATGGTGATACATGGCGAACCACCACCATGGAGAAAGAGACCTCAGTTCGTGGGACCACGCTTAGACTTTGAAGGATCTCTCTATGACGACTATGACCTCGTCGAGCCGCCAGTTAACTTCAACATGGATGATGAAGTCGCACATAGAAGCGAAGAACTCATTAGCCAGATGTATAACAAAACAGTTTCTCTCCTCAGGCAAAACCAAACCGCTCTCCTCAAAACCGTTAAGGTTCTATTGAACCAGAAAGAGATAAGTGGAGAAGCAATAGACTTCATACTTGACCATTACCCTCCTCAGACTCCGTTAAATTCTCTCTTACAAGAGCAAAATCCGGGAAGTCTTCCTTTTGTCCCTGAACATCTCCGGCGTGAATCCGGCGACTTTGTCCTTGTTAATCACTCTACCGACGTCAATGCTCAAGTATGATTCCGGCGTCCCAGAGACATCAAATCACTAAGCTTAGGTTTATTCATTGTCCGTCATTGTAACTTCGACTCAATCTCTGAAGTTTCGGACAGTTAAATTTACAGAAATAAAGAAAAAAACTTGGGTCAAAGACACTTCTTTGATTTGCTAACAATAGATTAGACAAACTTAAGTATAAATTTAGAAACA
CDS Sequence
Protein Sequence