Gene Details:
- Gene ID: AT4G23810
- Gene Symbol: ATWRKY53, WRKY53
- Gene Name:
- Description: WRKY family transcription factor;(source:Araport11)
- TAIR Accession: locus:2128514
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025034 — leaf — hoja (Spanish, exact), 葉 (Japanese, exact)
Gene Ontology:
- GO:0045893 — acts upstream of or within — positive regulation of DNA-templated transcription
- GO:0005515 — enables — protein binding
- GO:0042742 — acts upstream of or within — defense response to bacterium
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0005634 — located in — nucleus
- GO:0042742 — involved in — defense response to bacterium
- GO:0031347 — acts upstream of or within — regulation of defense response
- GO:0003677 — enables — DNA binding
- GO:0000981 — enables — DNA-binding transcription factor activity, RNA polymerase II-specific
- GO:2000022 — involved in — regulation of jasmonic acid mediated signaling pathway
- GO:0010150 — acts upstream of or within — leaf senescence
- GO:0042542 — acts upstream of or within — response to hydrogen peroxide
- GO:0010193 — acts upstream of or within — response to ozone
- GO:0009751 — acts upstream of or within — response to salicylic acid
- GO:0009751 — involved in — response to salicylic acid
- GO:0005634 — is active in — nucleus
- GO:0009617 — involved in — response to bacterium
- GO:0009507 — located in — chloroplast
- GO:0000976 — enables — transcription cis-regulatory region binding
Function-related keywords:
- shoot axis apex , leaf lamina base , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , leaf
Literature:
- The WRKY superfamily of plant transcription factors. DOI: 10.1016/s1360-1385(00)01600-9 ; PMID: 10785665
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The antagonist function of Arabidopsis WRKY53 and ESR/ESP in leaf senescence is modulated by the jasmonic and salicylic acid equilibrium. DOI: 10.1105/tpc.106.042705 ; PMID: 17369373
- A genomic approach to identify regulatory nodes in the transcriptional network of systemic acquired resistance in plants. DOI: 10.1371/journal.ppat.0020123 ; PMID: 17096590
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
- A novel WRKY transcriptional factor from Thlaspi caerulescens negatively regulates the osmotic stress tolerance of transgenic tobacco. DOI: 10.1007/s00299-007-0499-0 ; PMID: 18183400
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Epigenetic programming via histone methylation at WRKY53 controls leaf senescence in Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2008.03782.x ; PMID: 19143996
- Overexpression of wound-responsive RNA-binding proteins induces leaf senescence and hypersensitive-like cell death. DOI: 10.1111/j.1469-8137.2008.02557.x ; PMID: 18705666
- PEPR2 is a second receptor for the Pep1 and Pep2 peptides and contributes to defense responses in Arabidopsis. DOI: 10.1105/tpc.109.068874 ; PMID: 20179141
- Nuclear targeted AtS40 modulates senescence associated gene expression in Arabidopsis thaliana during natural development and in darkness. DOI: 10.1007/s11103-010-9618-3 ; PMID: 20238146
- Activation of a mitogen-activated protein kinase pathway in Arabidopsis by chitin. DOI: 10.1111/j.1364-3703.2004.00215.x ; PMID: 20565589
- Microarray analysis of Arabidopsis plants in response to allelochemical L-DOPA. DOI: 10.1007/s00425-010-1294-7 ; PMID: 20978802
- A broad-spectrum, efficient and nontransgenic approach to control plant viruses by application of salicylic acid and jasmonic acid. DOI: 10.1007/s00425-010-1308-5 ; PMID: 21046144
- WRKY22 transcription factor mediates dark-induced leaf senescence in Arabidopsis. DOI: 10.1007/s10059-011-0047-1 ; PMID: 21359674
- Next-generation systemic acquired resistance. DOI: 10.1104/pp.111.187468 ; PMID: 22147520
- WRKY54 and WRKY70 co-operate as negative regulators of leaf senescence in Arabidopsis thaliana. DOI: 10.1093/jxb/err450 ; PMID: 22268143
- Arabidopsis WRKY46 coordinates with WRKY70 and WRKY53 in basal resistance against pathogen Pseudomonas syringae. DOI: 10.1016/j.plantsci.2011.12.003 ; PMID: 22325892
- Early senescence and cell death in Arabidopsis saul1 mutants involves the PAD4-dependent salicylic acid pathway. DOI: 10.1104/pp.112.196220 ; PMID: 22706448
- The Arabidopsis LECTIN RECEPTOR KINASE-VI.2 is a functional protein kinase and is dispensable for basal resistance to Botrytis cinerea. DOI: 10.4161/psb.22611 ; PMID: 23221759
- A regulatory cascade involving class II ETHYLENE RESPONSE FACTOR transcriptional repressors operates in the progression of leaf senescence. DOI: 10.1104/pp.113.218115 ; PMID: 23629833
- An extracellular subtilase switch for immune priming in Arabidopsis. DOI: 10.1371/journal.ppat.1003445 ; PMID: 23818851
- The single-stranded DNA-binding protein WHIRLY1 represses WRKY53 expression and delays leaf senescence in a developmental stage-dependent manner in Arabidopsis. DOI: 10.1104/pp.113.223412 ; PMID: 23922267
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- induced expression and histone modifications of WRKY genes. DOI: 10.1007/s12038-013-9407-7 ; PMID: 24499796
- Arabidopsis AtERF15 positively regulates immunity against Pseudomonas syringae pv. tomato DC3000 and Botrytis cinerea. DOI: 10.3389/fpls.2015.00686 ; PMID: 26388886
- Correction: An Extracellular Subtilase Switch for Immune Priming in Arabidopsis. DOI: 10.1371/journal.ppat.1006003 ; PMID: 27806116
- Induced Systemic Resistance against Botrytis cinerea by Bacillus cereus AR156 and NPR1-Dependent Signaling Pathway and Activates PAMP-Triggered Immunity in Arabidopsis. DOI: 10.3389/fpls.2017.00238 ; PMID: 28293243
- Phosphorylation of WHIRLY1 by CIPK14 Shifts Its Localization and Dual Functions in Arabidopsis. DOI: 10.1016/j.molp.2017.03.011 ; PMID: 28412544
- Interaction of Arabidopsis TGA3 and WRKY53 transcription factors on Cestrum yellow leaf curling virus (CmYLCV) promoter mediates salicylic acid-dependent gene expression in planta. DOI: 10.1007/s00425-017-2769-6 ; PMID: 28913593
- Determination of histone epigenetic marks in Arabidopsis and tomato genes in the early response to Botrytis cinerea. DOI: 10.1007/s00299-017-2218-9 ; PMID: 29119291
- STRESS INDUCED FACTOR 2, a Leucine-Rich Repeat Kinase Regulates Basal Plant Pathogen Defense. DOI: 10.1104/pp.17.01266 ; PMID: 29463771
- WHIRLY1 Occupancy Affects Histone Lysine Modification and WRKY53 Transcription in Arabidopsis Developmental Manner. DOI: 10.3389/fpls.2018.01503 ; PMID: 30405658
- Multiple intramolecular trafficking signals in RESISTANCE TO POWDERY MILDEW 8.2 are engaged in activation of cell death and defense. DOI: 10.1111/tpj.14199 ; PMID: 30552775
- Senescence and Defense Pathways Contribute to Heterosis. DOI: 10.1104/pp.18.01205 ; PMID: 30710054
- The Histone H3K4 Demethylase JMJ16 Represses Leaf Senescence in Arabidopsis. DOI: 10.1105/tpc.18.00693 ; PMID: 30712008
- WRKY18 and WRKY53 Coordinate with HISTONE ACETYLTRANSFERASE1 to Regulate Rapid Responses to Sugar. DOI: 10.1104/pp.19.00511 ; PMID: 31182557
- Function of miR825 and miR825* as Negative Regulators in Bacillus cereus AR156-elicited Systemic Resistance to Botrytis cinerea in Arabidopsis thaliana. DOI: 10.3390/ijms20205032 ; PMID: 31614458
- H(2)O(2) as a Feedback Signal on Dual-Located WHIRLY1 Associates with Leaf Senescence in Arabidopsis. DOI: 10.3390/cells8121585 ; PMID: 31817716
- Arabidopsis thaliana WRKY25 Transcription Factor Mediates Oxidative Stress Tolerance and Regulates Senescence in a Redox-Dependent Manner. DOI: 10.3389/fpls.2019.01734 ; PMID: 32038695
- The diverse and unanticipated roles of histone deacetylase 9 in coordinating plant development and environmental acclimation. DOI: 10.1093/jxb/eraa335 ; PMID: 32687569
- Copper deficiency alters shoot architecture and reduces fertility of both gynoecium and androecium in Arabidopsis thaliana. DOI: 10.1002/pld3.288 ; PMID: 33283140
- WHIRLY1 recruits the histone deacetylase HDA15 repressing leaf senescence and flowering in Arabidopsis. DOI: 10.1111/jipb.13272 ; PMID: 35510566
- Phytocytokine signalling reopens stomata in plant immunity and water loss. DOI: 10.1038/s41586-022-04684-3 ; PMID: 35508659
- CALMODULIN1 and WRKY53 Function in Plant Defense by Negatively Regulating the Jasmonic Acid Biosynthesis Pathway in Arabidopsis. DOI: 10.3390/ijms23147718 ; PMID: 35887066
- MCU proteins dominate in vivo mitochondrial Ca2+ uptake in Arabidopsis roots. DOI: 10.1093/plcell/koac242 ; PMID: 35938694
- The Non-JAZ TIFY Protein TIFY8 of Arabidopsis thaliana Interacts with the HD-ZIP III Transcription Factor REVOLUTA and Regulates Leaf Senescence. DOI: 10.3390/ijms24043079 ; PMID: 36834490
- The Transcription Factors WRKY41 and WRKY53 Mediate Early Flowering Induced by the Novel Plant Growth Regulator Guvermectin in Arabidopsis thaliana. DOI: 10.3390/ijms24098424 ; PMID: 37176133
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- A genomic approach to identify regulatory nodes in the transcriptional network of systemic acquired resistance in plants. DOI: 10.1371/journal.ppat.0020123 ; PMID: 17096590
- Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor. DOI: 10.1094/MPMI-20-8-0900 ; PMID: 17722694
- Basal resistance against Pseudomonas syringae in Arabidopsis involves WRKY53 and a protein with homology to a nematode resistance protein. DOI: 10.1094/MPMI-20-11-1431 ; PMID: 17977154
- A novel WRKY transcriptional factor from Thlaspi caerulescens negatively regulates the osmotic stress tolerance of transgenic tobacco. DOI: 10.1007/s00299-007-0499-0 ; PMID: 18183400
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Sequences:
cDNA Sequence
- >AT4G23810.1
AATCCTATAACACTCTCATTCTCATCATATCATTCTTCAATCTATATAACCCATTCTTAATTATACTCAACACACATTATATTTTTCTGATCATATCATTCTTTCAGTCCATCTATATAACCAATTCTTGATTTATACTTAAAACACACATTATACATCTTTCTCATCATAGTTTGTATCAATTTCCTAGAGTAAACTACCTAAAGGAAAAAAAAAATCTATTTTGGGAATCATATACTAAAAATGGAAGGAAGAGATATGTTAAGTTGGGAGCAAAAGACATTGCTAAGCGAGCTTATCAATGGATTTGATGCGGCCAAAAAGCTTCAGGCACGACTTAGAGAAGCTCCGTCGCCGTCGTCATCATTTTCATCACCGGCGACGGCTGTTGCTGAGACTAACGAGATTCTGGTGAAGCAGATAGTTTCTTCCTACGAGAGATCTCTTCTTCTGCTAAACTGGTCATCCTCACCGAGCGTACAACTTATTCCGACGCCGGTTACTGTAGTCCCGGTGGCAAATCCCGGCAGTGTTCCAGAATCTCCGGCATCGATAAACGGAAGTCCGAGAAGTGAAGAGTTTGCCGATGGAGGAGGTTCTAGCGAGAGTCATCATCGCCAAGATTACATTTTCAATTCAAAGAAAAGAAAGATGTTACCAAAGTGGTCAGAAAAAGTGAGAATAAGCCCAGAGAGAGGCTTAGAAGGACCTCAAGATGATGTCTTTAGCTGGAGAAAATATGGTCAAAAAGACATTTTAGGCGCCAAATTCCCAAGGAGTTATTACAGATGCACACATCGTAGCACACAAAACTGTTGGGCAACGAAACAAGTCCAGAGATCAGACGGGGATGCTACGGTTTTCGAAGTGACGTACAGAGGAACACACACTTGTTCGCAGGCGATCACAAGAACACCACCATTAGCCTCGCCGGAGAAGCGACAAGACACCAGAGTCAAACCAGCCATTACCCAAAAGCCAAAGGATATTCTCGAGAGTCTTAAATCCAACTTAACCGTTCGAACCGATGGGCTTGATGATGGTAAAGACGTTTTCTCGTTCCCTGATACGCCGCCGTTTTACAATTACGGAACTATCAACGGCGAGTTCGGCCACGTGGAGAGTTCTCCGATCTTCGACGTTGTTGACTGGTTCAATCCAACGGTCGAGATTGACACAACTTTCCCCGCGTTTTTACACGAGTCGATTTATTATTAATTAAAATTTGTAACAGAGAAATAGATAGTAACTAGTAAGTAATGATCAGCGAGAGTTAAAACATAAAAGTACTTAGAGTAATCTAACGATGCATAATAAGGAATGTTCAACAGGACTTGAACATGATTTCAATACTAAGAGAGATTTATCTAGCTACTGGTAGTAGCCGCAGACTTCTTGTTGTAAGCTTCCACTTCCTTTTTGTATGCTTCCATCAGTTTTGCGGCCTTTCCGTTGTAAACTTGCTTCTCTTCTTCACTCAATTCCTGCAAAGACGTATTCGCACAGATAGATTA
CDS Sequence
Protein Sequence