Gene Details:
- Gene ID: AT4G23800
- Gene Symbol: 3xHMG-box2
- Gene Name: 3xHigh Mobility Group-box2
- Description: HMG (high mobility group) box protein;(source:Araport11)
- TAIR Accession: locus:2128504
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Gene Ontology:
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0000793 — colocalizes with — condensed chromosome
- GO:0000794 — colocalizes with — condensed nuclear chromosome
- GO:0003677 — enables — DNA binding
- GO:0005634 — located in — nucleus
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , petiole , hypocotyl , leaf apex , collective leaf structure
Literature:
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- HMGB6 from Arabidopsis thaliana specifies a novel type of plant chromosomal HMGB protein. DOI: 10.1021/bi035931c ; PMID: 14756567
- Transcriptional profile of the Arabidopsis root quiescent center. DOI: 10.1105/tpc.105.031724 ; PMID: 15937229
- Identification of putative Arabidopsis DEMETER target genes by GeneChip analysis. DOI: 10.1016/j.bbrc.2007.10.092 ; PMID: 17964287
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Sequences:
cDNA Sequence
- >AT4G23800.1
ACCTAAAATTCTCAATCCCTAAATTTCGAAATCTCACTCTCTCTCATTTTCGACTTTAGAAATGGCGACCAACGCAGATCCAGCTCCGACGAAGAAACCAAGGAACAGTAGAAAGGCGTTGAAGCAGAAGAATGAGCTCGTGGAGACGCCACCATCGCCTGTCTCCGTCAAGGGGAAGTCAGCGAAGTCTTTCGAGCAAGATCTGATGGAGATGCAGACAATGTTGGAGAAGATGAAGATCGAGAAGGATAAGACGGAGGAGTTACTTAAGGAGAAGGATGAGATTCTGAGAAAGAAGGAGGAGGAGCTAGAGACCAGAGACGCTGAGCAGGAGAAGCTCAAGGTGGAGCTGAAGAAGCTTCAGAAGATGAAGGAATTCAAACCTAACATGACTTTTGCTTGCGGTCAGTCATCTCTCACACAGGCTGAGCAAGAAAAGGCGAATAAGAAGAAGAAAAAGGATTGTCCTGAGACAAAGCGACCATCGTCCTCATACGTTTTGTGGTGTAAAGATCAATGGACTGAAGTCAAGAAGGAAAACCCTGAGGCTGACTTCAAGGAGACTTCGAACATTCTGGGGGCTAAATGGAAGTCTCTTAGTGCAGAAGATAAGAAGCCTTACGAGGAAAGGTACCAGGTTGAGAAAGAAGCTTACCTCCAGGTCATTGCTAAGGAGAAGCGCGAGAAGGAGGCCATGAAGCTTCTGGAGGATGACCAGAAGCAGAGAACTGCAATGGAATTGCTTGATCAGTATCTCAACTTTGTCCAGGAAGCTGAACAGGACAACAAGAAGAAGAACAAGAAGGAGAAGGACCCTCTGAAGCCAAAACATCCCGTATCTGCCTTCCTTGTTTATGCAAACGAGAGGAGAGCTGCTTTACGCGAAGAAAACAAAAGCGTCGTGGAGGTCGCAAAGATCACTGGAGAGGAGTGGAAGAACTTGTCAGACAAGAAAAAGGCACCCTACGAGAAGGTGGCAAAGAAGAACAAGGAGACATACCTGCAAGCAATGGAGGAATACAAGAGGACAAAGGAAGAAGAAGCCCTGAGTCAGAAGAAAGAAGAAGAGGAACTCTTGAAACTCCACAAACAAGAAGCTCTTCAAATGCTTAAGAAGAAGGAGAAAACTGATAATCTGATCAAGAAGGAGAAGGCGACCAAGAAGAAGAAGAACGAAAACGTTGACCCTAACAAACCAAAGAAGCCTGCTTCTTCATACTTTCTCTTCAGCAAGGACGAAAGGAAGAAATTGACAGAAGAACGTCCCGGGACAAACAACGCTACTGTTACTGCTCTCATTTCACTGAAATGGAAGGAATTGAGTGAAGAAGAGAAGCAAGTTTACAACGGAAAGGCCGCAAAACTGATGGAAGCATACAAAAAGGAAGTGGAAGCTTACAACAAGAAGTCTGCGGCTACTACCAGTAGCTAGATAAATCTCTCTTAGTATTGAAATCATGTTCAAGTCCTGTTGAACATTCCTTATTATGCATCGTTAGATTACTCTAAGTACTTTTATGTTTTAACTCTCGCTGATCATTACTTACTAGTTACTATCTATTTCTCTGTTACAAATTTTAATTAATAATAAATCGACTCGTGTAAAAACGCGGGGAAAGTTGTGTC - >AT4G23800.2
ACCTAAAATTCTCAATCCCTAAATTTCGAAATCTCACTCTCTCTCATTTTCGACTTTAGAAATGGCGACCAACGCAGATCCAGCTCCGACGAAGAAACCAAGGAACAGTAGAAAGGCGTTGAAGCAGAAGAATGAGCTCGTGGAGACGCCACCATCGCCTGTCTCCGTCAAGGGGAAGTCAGCGAAGTCTTTCGAGCAAGATCTGATGGAGATGCAGACAATGTTGGAGAAGATGAAGATCGAGAAGGATAAGACGGAGGAGTTACTTAAGGAGAAGGATGAGATTCTGAGAAAGAAGGAGGAGGAGCTAGAGACCAGAGACGCTGAGCAGGAGAAGCTCAAGGTGGAGCTGAAGAAGCTTCAGAAGATGAAGGAATTCAAACCTAACATGACTTTTGCTTGCGGTCAGTCATCTCTCACACAGGCTGAGCAAGAAAAGGCGAATAAGAAGAAGAAAAAGGATTGTCCTGAGACAAAGCGACCATCGTCCTCATACGTTTTGTGGTGTAAAGATCAATGGACTGAAGTCAAGAAGGAAAACCCTGAGGCTGACTTCAAGGAGACTTCGAACATTCTGGGGGCTAAATGGAAGTCTCTTAGTGCAGAAGATAAGAAGCCTTACGAGGAAAGGTACCAGGTTGAGAAAGAAGCTTACCTCCAGGTCATTGCTAAGGAGAAGCGCGAGAAGGAGGCCATGAAGCTTCTGGAGGATGACCAGAAGCAGAGAACTGCAATGGAATTGCTTGATCAGTATCTCAACTTTGTCCAGGAAGCTGAACAGGACAACAAGAAGAAGAACAAGAAGGAGAAGGACCCTCTGAAGCCAAAACATCCCGTATCTGCCTTCCTTGTTTATGCAAACGAGAGGAGAGCTGCTTTACGCGAAGAAAACAAAAGCGTCGTGGAGGTCGCAAAGATCACTGGAGAGGAGTGGAAGAACTTGTCAGACAAGAAAAAGGCACCCTACGAGAAGGTGGCAAAGAAGAACAAGGAGACATACCTGCAAGCAATGGAGGAATACAAGAGGACAAAGGAAGAAGAAGCCCTGAGTCAGAAGAAAGAAGAAGAGGAACTCTTGAAACTCCACAAACAAGAAGCTCTTCAAATGCTTAAGAAGAAGGAGAAAACTGATAATCTGATCAAGAAGGAGAAGGCGACCAAGAAGAAGAAGAACGAAAACGTTGACCCTAACAAACCAAAGAAGCCTGCTTCTTCATACTTTCTCTTCAGCAAGGACGAAAGGAAGAAATTGACAGAAGAACGTCCCGGGACAAACAACGCTACTGTTACTGCTCTCATTTCACTGAAATGGAAGGAATTGAGTGAAGAAGAGAAGCAAGTTTACAACGGAAAGGCCGCAAAACTGATGGAAGCATACAAAAAGGAAGTGGAAGCTTACAACAAGAAGTCTGCGGCTACTACCAGTAGCTAGATAAATCTCTCTTAGTATTGAAATCATGTTCAAGTCCTGTTGAACATTCCTTATTATGCATCGTTAGATTACTCTAAGTACTTTTATGTTTTAACTCTCGCTGATCATTACTTACTAGTTACTATCTATTTCTCTGTTACAAATTTTAATTAATAATAAATCGACTCGTGTAAAAACGCGGGGAAAGTTGTGTC
CDS Sequence
Protein Sequence