Gene Details:
- Gene ID: AT4G23750
- Gene Symbol: CRF2, TMO3
- Gene Name: cytokinin response factor 2, TARGET OF MONOPTEROS 3
- Description: cytokinin response factor 2;(source:Araport11)
- TAIR Accession: locus:2128429
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Gene Ontology:
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0005634 — located in — nucleus
- GO:0006355 — involved in — regulation of DNA-templated transcription
- GO:0048825 — acts upstream of or within — cotyledon development
- GO:0005515 — enables — protein binding
- GO:0048364 — acts upstream of or within — root development
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0042802 — enables — identical protein binding
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , sepal , flower , inflorescence flower pedicel , petiole , leaf apex , collective leaf structure
Literature:
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Global and hormone-induced gene expression changes during shoot development in Arabidopsis. DOI: 10.1105/tpc.006668 ; PMID: 12417700
- Genomic evidence for COP1 as a repressor of light-regulated gene expression and development in Arabidopsis. DOI: 10.1105/tpc.004416 ; PMID: 12368493
- Expression profiling of cytokinin action in Arabidopsis. DOI: 10.1104/pp.103.021436 ; PMID: 12913156
- Genomic analysis of the nitrate response using a nitrate reductase-null mutant of Arabidopsis. DOI: 10.1104/pp.104.044610 ; PMID: 15333754
- Arabidopsis response regulator, ARR22, ectopic expression of which results in phenotypes similar to the wol cytokinin-receptor mutant. DOI: 10.1093/pcp/pch128 ; PMID: 15356332
- Combinatorial microarray analysis revealing arabidopsis genes implicated in cytokinin responses through the His->Asp Phosphorelay circuitry. DOI: 10.1093/pcp/pci033 ; PMID: 15695462
- A subset of Arabidopsis AP2 transcription factors mediates cytokinin responses in concert with a two-component pathway. DOI: 10.1073/pnas.0602038103 ; PMID: 16832061
- Genome-wide expression profiling of ARABIDOPSIS RESPONSE REGULATOR 7(ARR7) overexpression in cytokinin response. DOI: 10.1007/s00438-006-0177-x ; PMID: 17061125
- Light has a specific role in modulating Arabidopsis gene expression at low temperature. DOI: 10.1186/1471-2229-8-13 ; PMID: 18230142
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analysis of proliferating Arabidopsis endosperm reveals biological implications for the control of syncytial division, cytokinin signaling, and gene expression regulation. DOI: 10.1104/pp.108.128108 ; PMID: 18923020
- MONOPTEROS controls embryonic root initiation by regulating a mobile transcription factor. DOI: 10.1038/nature08836 ; PMID: 20220754
- CRFs form protein-protein interactions with each other and with members of the cytokinin signalling pathway in Arabidopsis via the CRF domain. DOI: 10.1093/jxb/err199 ; PMID: 21705390
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- Promoter-based integration in plant defense regulation. DOI: 10.1104/pp.114.248716 ; PMID: 25352272
- Irrepressible MONOPTEROS/ARF5 promotes de novo shoot formation. DOI: 10.1111/nph.13014 ; PMID: 25274430
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- Auxin response factor functions in plant regeneration. DOI: 10.4161/15592324.2014.993293 ; PMID: 26098229
- The cytokinin response factors modulate root and shoot growth and promote leaf senescence in Arabidopsis. DOI: 10.1111/tpj.13097 ; PMID: 26662515
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
- Genome-wide analysis of the ERF gene family in Arabidopsis and rice. DOI: 10.1104/pp.105.073783 ; PMID: 16407444
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
- Genome-wide analysis of the ERF gene family in Arabidopsis and rice. DOI: 10.1104/pp.105.073783 ; PMID: 16407444
Sequences:
cDNA Sequence
- >AT4G23750.1
GGAGTAAACACTAATAATATGAGACGTTTCAAAGATCCTATAAAATAGTCACTCTCTACCATTACATGTGCTCTGCCGCTTTTAAATCTCTCATCTTCTTCCTCGTGTCACTCTTTCTCTCACACTCTGCAAAAACATTTTCTTGTCTCTCCTCTGCCCAAATTTTTTTTCTTTCCAGGAATATTTCCTAGAAAAACCCAAGCAAAGCTTTAACCCCTTCCTCCTCCAAAAGTAGCATCTTCCTCTTTTTCTATTTCTCCTTTCCTCTTCTTATCTCTCTCTCGTTTGTGAACGATTCCTTAAGAATATAACCAAAAGCCCTTTTCTCCTTTCTTCAACTTTCCGGGAAAAATCTTCACGCAGCAAGGTTTCTCTCTCGGCTCTCGCAGTGTTTTTCGTGCCTTTTGTTCTTTCTATAAAAAAAAAATTCGCGTCCTTTAAGAAAACTTTTTCCACCTAGAGAAGAAGAAGAGTATCACTCTTGTTGTTCAAGTTTCTCTCTTTAATAAAAAATCCATCTTTATTCTTTGTCTTCTTTCCTTTTTGCTTTCCCTAATCTCTATGTTATAAACACACAGAGAGAAACAAAGTCACAGTCTCGAGTCAAAAACAGAGAATACGAAAGAAAAATGGAAGCGGAGAAGAAAATGGTTCTACCGAGAATCAAATTCACAGAGCACAAAACCAACACGACAACAATCGTATCGGAGTTAACCAACACTCACCAAACCAGGATTCTTCGTATCTCAGTCACTGACCCAGACGCTACTGATTCCTCCAGTGACGACGAAGAAGAAGAACATCAACGCTTTGTCTCTAAACGCCGTCGTGTTAAGAAGTTTGTCAACGAAGTCTATCTCGATTCCGGTGCTGTTGTTACTGGTAGTTGTGGTCAAATGGAGTCGAAGAAGAGACAAAAGAGAGCGGTTAAATCGGAGTCTACTGTTTCTCCGGTTGTTTCAGCGACGACGACTACGACGGGAGAGAAGAAGTTCCGAGGAGTGAGACAGCGTCCATGGGGAAAATGGGCGGCGGAGATAAGAGATCCGTTGAAACGTGTACGGCTCTGGTTAGGTACTTACAACACGGCGGAAGAAGCTGCTATGGTTTACGATAACGCCGCTATTCAGCTTCGTGGTCCCGACGCTCTGACTAATTTCTCAGTCACTCCGACAACAGCGACGGAGAAGAAAGCCCCACCACCGTCTCCGGTGAAGAAGAAGAAGAAGAAAAACAACAAAAGCAAAAAATCCGTTACTGCTTCTTCCTCCATCAGCAGAAGCAGCAGCAACGATTGTCTCTGCTCTCCGGTGTCTGTTCTCCGATCTCCTTTCGCCGTCGACGAATTCTCCGGCATTTCTTCATCACCAGTCGCGGCCGTTGTAGTCAAGGAAGAGCCATCCATGACAACGGTATCTGAAACTTTCTCTGATTTCTCGGCGCCCTTGTTCTCAGATGATGACGTGTTCGATTTCCGGAGCTCAGTGGTTCCCGACTATCTCGGCGGCGATTTATTTGGGGAAGATCTATTCACGGCGGATATGTGTACGGATATGAACTTCGGATTCGATTTCGGATCCGGATTATCCAGCTGGCACATGGAGGACCATTTTCAAGATATCGGGGATCTATTCGGGTCGGATCCTCTTTTAGCTGTTTAATAATATTTTAAATAAATAAATAGTTATACCGGCCGTTACTAAACGGAACCGGAGAAAGTTTTGTATACCGGTGACATAAAATCTCGGTTATGTTCGTAATCTTTTTTTCTTTGTTATATATAAAAATATGAATGAAACTGAATTAATGTAAGTTAATGGTGATAATTATTAACGTTTTAAGTTTTGAAAAATAATTTTCGTCTGTTAACGATAATGGGAGGTCGAGTTTCTTTTTGCTTCCACGTGCTCT - >AT4G23750.2
GGAGTAAACACTAATAATATGAGACGTTTCAAAGATCCTATAAAATAGTCACTCTCTACCATTACATGTGCTCTGCCGCTTTTAAATCTCTCATCTTCTTCCTCGTGTCACTCTTTCTCTCACACTCTGCAAAAACATTTTCTTGTCTCTCCTCTGCCCAAATTTTTTTTCTTTCCAGGAATATTTCCTAGAAAAACCCAAGCAAAGCTTTAACCCCTTCCTCCTCCAAAAGTAGCATCTTCCTCTTTTTCTATTTCTCCTTTCCTCTTCTTATCTCTCTCTCGTTTGTGAACGATTCCTTAAGAATATAACCAAAAGCCCTTTTCTCCTTTCTTCAACTTTCCGGGAAAAATCTTCACGCAGCAAGGTTTCTCTCTCGGCTCTCGCAGTGTTTTTCGTGCCTTTTGTTCTTTCTATAAAAAAAAAATTCGCGTCCTTTAAGAAAACTTTTTCCACCTAGAGAAGAAGAAGAGTATCACTCTTGTTGTTCAAGTTTCTCTCTTTAATAAAAAATCCATCTTTATTCTTTGTCTTCTTTCCTTTTTGCTTTCCCTAATCTCTATGTTATAAACACACAGAGAGAAACAAAGTCACAGTCTCGAGTCAAAAACAGAGAATACGAAAGAAAAATGGAAGCGGAGAAGAAAATGGTTCTACCGAGAATCAAATTCACAGAGCACAAAACCAACACGACAACAATCGTATCGGAGTTAACCAACACTCACCAAACCAGGATTCTTCGTATCTCAGTCACTGACCCAGACGCTACTGATTCCTCCAGTGACGACGAAGAAGAAGAACATCAACGCTTTGTCTCTAAACGCCGTCGTGTTAAGAAGTTTGTCAACGAAGTCTATCTCGATTCCGGTGCTGTTGTTACTGGTAGTTGTGGTCAAATGGAGTCGAAGAAGAGACAAAAGAGAGCGGTTAAATCGGAGTCTACTGTTTCTCCGGTTGTTTCAGCGACGACGACTACGACGGGAGAGAAGAAGTTCCGAGGAGTGAGACAGCGTCCATGGGGAAAATGGGCGGCGGAGATAAGAGATCCGTTGAAACGTGTACGGCTCTGGTTAGGTACTTACAACACGGCGGAAGAAGCTGCTATGGTTTACGATAACGCCGCTATTCAGCTTCGTGGTCCCGACGCTCTGACTAATTTCTCAGTCACTCCGACAACAGCGACGGAGAAGAAAGCCCCACCACCGTCTCCGGTGAAGAAGAAGAAGAAGAAAAACAACAAAAGCAAAAAATCCGTTACTGCTTCTTCCTCCATCAGCAGAAGCAGCAGCAACGATTGTCTCTGCTCTCCGGTGTCTGTTCTCCGATCTCCTTTCGCCGTCGACGAATTCTCCGGCATTTCTTCATCACCAGTCGCGGCCGTTGTAGTCAAGGAAGAGCCATCCATGACAACGGTATCTGAAACTTTCTCTGATTTCTCGGCGCCCTTGTTCTCAGATGATGACGTGTTCGATTTCCGGAGCTCAGTGGTTCCCGACTATCTCGGCGGCGATTTATTTGGGGAAGATCTATTCACGGCGGATATGTGTACGGATATGAACTTCGGATTCGATTTCGGATCCGGATTATCCAGCTGGCACATGGAGGACCATTTTCAAGATATCGGGGATCTATTCGGGTCGGATCCTCTTTTAGCTGTTTAATAATATTTTAAATAAATAAATAGTTATACCGGCCGTTACTAAACGGAACCGGAGAAAGTTTTGTATACCGGTGACATAAAATCTCGGTTATGTTCGTAATCTTTTTTTCTTTGTTATATATAAAAATATGAATGAAACTGAATTAATGTAAGTTAATGGTGATAATTATTAACGTTTTAAGTTTTGAAAAATAATTTTCGTCTGTTAACGATAATGGGAGGTCGAGTTTCTTTTTGCTTCCACGTGCTCT
CDS Sequence
Protein Sequence