Gene Details:
- Gene ID: AT4G23690
- Gene Symbol: AtDIR6, DIR6
- Gene Name: Arabidopsis thaliana dirigent protein 6, dirigent protein 6
- Description: Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11)
- TAIR Accession: locus:2128469
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0042802 — enables — identical protein binding
- GO:0042349 — enables — guiding stereospecific synthesis activity
- GO:1901599 — acts upstream of or within — (-)-pinoresinol biosynthetic process
- GO:0005576 — located in — extracellular region
- GO:0042803 — enables — protein homodimerization activity
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- The FHY3 and FAR1 genes encode transposase-related proteins involved in regulation of gene expression by the phytochrome A-signaling pathway. DOI: 10.1046/j.1365-313x.2003.01741.x ; PMID: 12753585
- Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. DOI: 10.1104/pp.103.034736 ; PMID: 15047898
- Analysis of sequence, map position, and gene expression reveals conserved essential genes for iron uptake in Arabidopsis and tomato. DOI: 10.1104/pp.104.047233 ; PMID: 15531708
- Genome-wide identification of genes expressed in Arabidopsis pistils specifically along the path of pollen tube growth. DOI: 10.1104/pp.105.060558 ; PMID: 15894741
- Gibberellin mobilizes distinct DELLA-dependent transcriptomes to regulate seed germination and floral development in Arabidopsis. DOI: 10.1104/pp.106.082289 ; PMID: 16920880
- An enantiocomplementary dirigent protein for the enantioselective laccase-catalyzed oxidative coupling of phenols. DOI: 10.1002/anie.200904622 ; PMID: 19946920
- Dirigent proteins in conifer defense II: Extended gene discovery, phylogeny, and constitutive and stress-induced gene expression in spruce (Picea spp.). DOI: 10.1016/j.phytochem.2007.04.042 ; PMID: 17590394
- Opposite stereoselectivities of dirigent proteins in Arabidopsis and schizandra species. DOI: 10.1074/jbc.M112.387423 ; PMID: 22854967
- Dirigent proteins in plants: modulating cell wall metabolism during abiotic and biotic stress exposure. DOI: 10.1093/jxb/erx141 ; PMID: 28472349
Sequences:
cDNA Sequence
- >AT4G23690.1
GTGAAATTAGGTTGTAGCTTAGTTACCACCAACCCCGCTTCCGCATGGTCGTTAAACCTTATGATCTTTCTAATTTATATCTTAAATATAAATCGGCAAAACATCAACAACCCATTAGATATGTCCCTCAAACTTTGAAAACGATTATCCAAATAAATTATTTATTAAAACAAGTGAATAATACTTCTATATAAATGGGTTTAAGCCTCCTTCATTAAACACATCTCACAACTCACTAATCTCTAGCTAACCATGGCATTTCTAGTAGAGAAACAACTCTTCAAAGCCCTCTTCTCATTCTTCTTATTAGTTTTACTCTTCTCCGATACCGTCTTATCTTTCCGAAAAACAATCGACCAGAAAAAACCCTGCAAACACTTCTCGTTCTATTTCCATGACATCCTCTACGATGGCGACAATGTAGCAAACGCAACCTCCGCCGCCATCGTGAGCCCTCCAGGACTAGGAAACTTCAAGTTCGGTAAGTTTGTGATCTTTGATGGGCCCATAACAATGGACAAGAACTATCTCTCAAAACCCGTGGCTCGCGCACAAGGCTTCTATTTCTATGACATGAAGATGGACTTCAATTCGTGGTTTTCCTACACGTTGGTGTTTAACTCAACGGAACACAAAGGGACATTGAACATAATGGGTGCTGATTTGATGATGGAGCCAACAAGAGATCTATCGGTCGTTGGTGGGACAGGTGACTTCTTCATGGCTCGTGGGATCGCTACCTTCGTGACTGATTTATTTCAAGGGGCTAAGTATTTCCGAGTTAAGATGGATATTAAGCTCTATGAATGTTACTAAGTAGCTAAGAATGTGTGTTTTGTTTGAAAATTTTATGTTGACACAGAGAAATGTGTTTACAATAATTAAGTTTTTTTTTTGCCTTTTCTTTTGCTGTTGTCTTTTTGTTTATCTATAATTATTATGTGATTTATTTCAAGGGGATAAGTATTTCCGAGTTAAGATGGATATTAAGCTCTATGAATGTTACTAACTAGCGAATAATATTTGTTTTGTTTGAAAATTGGTATGTACACAGAGATAATGTGTTACTAATAAGTAGTGTTTTTTTTTGTGGCCTTTTTATTTGGTGTTGTCTTTTTGTTTATCAATAGTCAATTATT
CDS Sequence
Protein Sequence