Gene Details:
- Gene ID: AT4G23600
- Gene Symbol: CORI3, JR2
- Gene Name: CORONATINE INDUCED 1, JASMONIC ACID RESPONSIVE 2
- Description: Tyrosine transaminase family protein;(source:Araport11)
- TAIR Accession: locus:2128459
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Gene Ontology:
- GO:0009753 — acts upstream of or within — response to jasmonic acid
- GO:0004121 — enables — cystathionine beta-lyase activity
- GO:0005829 — is active in — cytosol
- GO:0005737 — located in — cytoplasm
- GO:0000325 — located in — plant-type vacuole
- GO:0005829 — located in — cytosol
- GO:0048046 — located in — apoplast
- GO:0006520 — involved in — amino acid metabolic process
- GO:0042538 — acts upstream of or within — hyperosmotic salinity response
- GO:0030170 — enables — pyridoxal phosphate binding
- GO:0009058 — involved in — biosynthetic process
- GO:0006520 — acts upstream of or within — amino acid metabolic process
- GO:0008483 — enables — transaminase activity
- GO:0010188 — acts upstream of or within — response to microbial phytotoxin
- GO:0009611 — acts upstream of or within — response to wounding
- GO:0009737 — acts upstream of or within — response to abscisic acid
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , leaf apex , collective leaf structure
Literature:
- Jasmonic acid-dependent and -independent wound signal transduction pathways are differentially regulated by Ca2+/calmodulin in Arabidopsis thaliana. DOI: 10.1007/s004380050749 ; PMID: 9648747
- Jasmonic acid-dependent and -independent signaling pathways control wound-induced gene activation in Arabidopsis thaliana. DOI: 10.1104/pp.115.2.817 ; PMID: 9342878
- Genes that are uniquely stress regulated in salt overly sensitive (sos) mutants. DOI: 10.1104/pp.126.1.363 ; PMID: 11351099
- Expression profiling reveals COI1 to be a key regulator of genes involved in and methyl jasmonate-induced secondary metabolism, defence, and hormone interactions. DOI: 10.1007/s11103-005-7306-5 ; PMID: 16021335
- The role of JAR1 in Jasmonoyl-L: -isoleucine production during Arabidopsis wound response. DOI: 10.1007/s00425-008-0694-4 ; PMID: 18247047
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Enhanced defense responses in Arabidopsis induced by the cell wall protein fractions from Pythium oligandrum require SGT1, RAR1, NPR1 and JAR1. DOI: 10.1093/pcp/pcp044 ; PMID: 19304739
- Non-specific phytohormonal induction of AtMYB44 and suppression of jasmonate-responsive gene activation in Arabidopsis thaliana. DOI: 10.1007/s10059-010-0009-z ; PMID: 20016937
- Assessment of resistance pathways induced in Arabidopsis thaliana by hypovirulent Rhizoctonia spp. isolates. DOI: 10.1094/PHYTO-09-10-0247 ; PMID: 21385012
- Arabidopsis brassinosteroid-overproducing gulliver3-D/dwarf4-D mutants exhibit altered responses to jasmonic acid and pathogen. DOI: 10.1007/s00299-012-1381-2 ; PMID: 23297052
- Identification of a novel jasmonate-responsive element in the AtJMT promoter and its binding protein for AtJMT repression. DOI: 10.1371/journal.pone.0055482 ; PMID: 23393583
- PLANT U-BOX PROTEIN10 Regulates MYC2 Stability in Arabidopsis. DOI: 10.1105/tpc.15.00385 ; PMID: 26163577
- Salt hypersensitive mutant 9, a nucleolar APUM23 protein, is essential for salt sensitivity in association with the ABA signaling pathway in Arabidopsis. DOI: 10.1186/s12870-018-1255-z ; PMID: 29490615
- Genes that are uniquely stress regulated in salt overly sensitive (sos) mutants. DOI: 10.1104/pp.126.1.363 ; PMID: 11351099
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- Expression profiling reveals COI1 to be a key regulator of genes involved in and methyl jasmonate-induced secondary metabolism, defence, and hormone interactions. DOI: 10.1007/s11103-005-7306-5 ; PMID: 16021335
- Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. DOI: 10.1016/j.phytochem.2008.04.007 ; PMID: 18538804
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. DOI: 10.1016/j.phytochem.2008.04.007 ; PMID: 18538804
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. DOI: 10.1016/j.phytochem.2008.04.007 ; PMID: 18538804
Sequences:
cDNA Sequence
- >AT4G23600.3
ACCCAAAAACAAAATCTAATAGAGAAAAATAAGTAGATATGGCAACCCTTAAGTGCATTGATTGGCAATTCAGCGGAAGCGAGGCGGCCAAAGATGCTGCTGCGGCCTCCTTAGGCTCATATACCTCTGCACTCTATGCCCTGTGCGATCCTCATGGCAAACCCATTTTGCCCCCACGAAATGAGATCCTGGAGACCAGCAATACAGCCGAAAAAGCAGTTGTTAAAGCTGTTCTTTATGGCTCGGGAAACGCCTATGCTCCTAGCTTAGGCCTCGCGGCCGCCAAAAGTGCCGTAGCAGAGTATCTAAACCAAGGTCTTCCAAAGAAGCTTACCGCAGATGACGTGTTTATGACTCTGGGATGCAAACAAGCTATTGAGCTCGCGGTAGACATTCTCGCTAAACCGAAAGCCAACGTTTTGCTTCCGAGTCCCGGCTTCCCATGGGACCTAGTCCGCTCCATCTACAAGAACCTTGAGGTCCGCCACTATAATTTCCTTCCAGAAAAGAACTTTGAAATCGACTTTGATAGCGTCCGAGCGCTCGTGGACGAGAACACATTTGCCATATTTATAATCAACCCCCACAACCCCAATGGTAACACCTACTCCGAGGCTCATCTCAAACAGCTGGCTGAACTGGCTAAGGAACTCAAGATTATGGTGGTTTCTGACGAGGTTTTTAGATGGACACTCTTTGGTAGTAACCCTTTTGTTCCTATGGGAAAATTCTCGTCGATCGTACCAGTGGTTACACTCGGATCCATATCAAAGGGATGGAAAGTCCCAGGATGGCGAACTGGTTGGCTCACGCTACATGATCTAGACGGTGTCTTCAGAAACACCAAGGTCTTACAAGCTGCTCAAGATTTTCTCCAGATAAACAATAACCCTCCGACAGTTATCCAGGCGGCTATTCCTGACATCTTGGAGAAAACTCCTCAAGAGTTTTTTGATAAGAGGCAGAGTTTTCTGAAAGATAAAGTAGAATTTGGTTATTCTAAGCTCAAGTACATTCCTAGCCTCACTTGCTACATGAAACCCGAAGCCTGCACCTTCTTATGGACCGAGCTTGATTTATCGAGCTTTGTGGACATCGAAGACGATCAAGACTTTTGCAATAAGCTTGCTAAAGAAGAAAACCTCGTCGTTTTACCAGGACATGTTGTGTGTTGGATTTGATAGGGATTGCATTCAGTCAGAAGAACTGGTTGAGGCATTCTATCGATATGGAGACTCCGGTATTGGAGGATGCATTGGAAAGATTGAAGAGCTTCTGCGATCGCCATTCCAACAAAAAAGCTCCCCTCAAAGACGTCAATGGTGTTAAGTAAAGGGTCAATATGGTTATTTGCCTAAGTCATTTACGTATGCTATAATGATAAATAAATGAGTGTTTCTTGGTTTGAGGTAAATCATGAACACTTTAGTGTATTTGTAACAAATAAAATGGGTGCACTTAATATCAATCGTGTGTAATGTTTTCTCATAGTTTGCTATATCTTTGTGTATATCTATCTACTTTTCGGAAATAAAATAGATTGTCTGCATTTACCATTGGAATACATATACATATATACATCTCTTAACTACTTCAAAATACTTTGGACTTGTCGTGTCGTGTATTTTTAGAAAAATTATGAAGAAACCCAGTTTTACCT - >AT4G23600.1
ACCCAAAAACAAAATCTAATAGAGAAAAATAAGTAGATATGGCAACCCTTAAGTGCATTGATTGGCAATTCAGCGGAAGCGAGGCGGCCAAAGATGCTGCTGCGGCCTCCTTAGGCTCATATACCTCTGCACTCTATGCCCTGTGCGATCCTCATGGCAAACCCATTTTGCCCCCACGAAATGAGATCCTGGAGACCAGCAATACAGCCGAAAAAGCAGTTGTTAAAGCTGTTCTTTATGGCTCGGGAAACGCCTATGCTCCTAGCTTAGGCCTCGCGGCCGCCAAAAGTGCCGTAGCAGAGTATCTAAACCAAGGTCTTCCAAAGAAGCTTACCGCAGATGACGTGTTTATGACTCTGGGATGCAAACAAGCTATTGAGCTCGCGGTAGACATTCTCGCTAAACCGAAAGCCAACGTTTTGCTTCCGAGTCCCGGCTTCCCATGGGACCTAGTCCGCTCCATCTACAAGAACCTTGAGGTCCGCCACTATAATTTCCTTCCAGAAAAGAACTTTGAAATCGACTTTGATAGCGTCCGAGCGCTCGTGGACGAGAACACATTTGCCATATTTATAATCAACCCCCACAACCCCAATGGTAACACCTACTCCGAGGCTCATCTCAAACAGCTGGCTGAACTGGCTAAGGAACTCAAGATTATGGTGGTTTCTGACGAGGTTTTTAGATGGACACTCTTTGGTAGTAACCCTTTTGTTCCTATGGGAAAATTCTCGTCGATCGTACCAGTGGTTACACTCGGATCCATATCAAAGGGATGGAAAGTCCCAGGATGGCGAACTGGTTGGCTCACGCTACATGATCTAGACGGTGTCTTCAGAAACACCAAGGTCTTACAAGCTGCTCAAGATTTTCTCCAGATAAACAATAACCCTCCGACAGTTATCCAGGCGGCTATTCCTGACATCTTGGAGAAAACTCCTCAAGAGTTTTTTGATAAGAGGCAGAGTTTTCTGAAAGATAAAGTAGAATTTGGTTATTCTAAGCTCAAGTACATTCCTAGCCTCACTTGCTACATGAAACCCGAAGCCTGCACCTTCTTATGGACCGAGCTTGATTTATCGAGCTTTGTGGACATCGAAGACGATCAAGACTTTTGCAATAAGCTTGCTAAAGAAGAAAACCTCGTCGTTTTACCAGGACATGTTGTGTGTTGGATTTGATAGGGATTGCATTCAGTCAGAAGAACTGGTTGAGGCATTCTATCGATATGGAGACTCCGGTATTGGAGGATGCATTGGAAAGATTGAAGAGCTTCTGCGATCGCCATTCCAACAAAAAAGCTCCCCTCAAAGACGTCAATGGTGTTAAGTAAAGGGTCAATATGGTTATTTGCCTAAGTCATTTACGTATGCTATAATGATAAATAAATGAGTGTTTCTTGGTTTGAGGTAAATCATGAACACTTTAGTGTATTTGTAACAAATAAAATGGGTGCACTTAATATCAATCGTGTGTAATGTTTTCTCATAGTTTGCTATATCTTTGTGTATATCTATCTACTTTTCGGAAATAAAATAGATTGTCTGCATTTACCATTGGAATACATATACATATATACATCTCTTAACTACTTCAAAATACTTTGGACTTGTCGTGTCGTGTATTTTTAGAAAAATTATGAAGAAACCCAGTTTTACCT - >AT4G23600.2
ACCCAAAAACAAAATCTAATAGAGAAAAATAAGTAGATATGGCAACCCTTAAGTGCATTGATTGGCAATTCAGCGGAAGCGAGGCGGCCAAAGATGCTGCTGCGGCCTCCTTAGGCTCATATACCTCTGCACTCTATGCCCTGTGCGATCCTCATGGCAAACCCATTTTGCCCCCACGAAATGAGATCCTGGAGACCAGCAATACAGCCGAAAAAGCAGTTGTTAAAGCTGTTCTTTATGGCTCGGGAAACGCCTATGCTCCTAGCTTAGGCCTCGCGGCCGCCAAAAGTGCCGTAGCAGAGTATCTAAACCAAGGTCTTCCAAAGAAGCTTACCGCAGATGACGTGTTTATGACTCTGGGATGCAAACAAGCTATTGAGCTCGCGGTAGACATTCTCGCTAAACCGAAAGCCAACGTTTTGCTTCCGAGTCCCGGCTTCCCATGGGACCTAGTCCGCTCCATCTACAAGAACCTTGAGGTCCGCCACTATAATTTCCTTCCAGAAAAGAACTTTGAAATCGACTTTGATAGCGTCCGAGCGCTCGTGGACGAGAACACATTTGCCATATTTATAATCAACCCCCACAACCCCAATGGTAACACCTACTCCGAGGCTCATCTCAAACAGCTGGCTGAACTGGCTAAGGAACTCAAGATTATGGTGGTTTCTGACGAGGTTTTTAGATGGACACTCTTTGGTAGTAACCCTTTTGTTCCTATGGGAAAATTCTCGTCGATCGTACCAGTGGTTACACTCGGATCCATATCAAAGGGATGGAAAGTCCCAGGATGGCGAACTGGTTGGCTCACGCTACATGATCTAGACGGTGTCTTCAGAAACACCAAGGTCTTACAAGCTGCTCAAGATTTTCTCCAGATAAACAATAACCCTCCGACAGTTATCCAGGCGGCTATTCCTGACATCTTGGAGAAAACTCCTCAAGAGTTTTTTGATAAGAGGCAGAGTTTTCTGAAAGATAAAGTAGAATTTGGTTATTCTAAGCTCAAGTACATTCCTAGCCTCACTTGCTACATGAAACCCGAAGCCTGCACCTTCTTATGGACCGAGCTTGATTTATCGAGCTTTGTGGACATCGAAGACGATCAAGACTTTTGCAATAAGCTTGCTAAAGAAGAAAACCTCGTCGTTTTACCAGGACATGTTGTGTGTTGGATTTGATAGGGATTGCATTCAGTCAGAAGAACTGGTTGAGGCATTCTATCGATATGGAGACTCCGGTATTGGAGGATGCATTGGAAAGATTGAAGAGCTTCTGCGATCGCCATTCCAACAAAAAAGCTCCCCTCAAAGACGTCAATGGTGTTAAGTAAAGGGTCAATATGGTTATTTGCCTAAGTCATTTACGTATGCTATAATGATAAATAAATGAGTGTTTCTTGGTTTGAGGTAAATCATGAACACTTTAGTGTATTTGTAACAAATAAAATGGGTGCACTTAATATCAATCGTGTGTAATGTTTTCTCATAGTTTGCTATATCTTTGTGTATATCTATCTACTTTTCGGAAATAAAATAGATTGTCTGCATTTACCATTGGAATACATATACATATATACATCTCTTAACTACTTCAAAATACTTTGGACTTGTCGTGTCGTGTATTTTTAGAAAAATTATGAAGAAACCCAGTTTTACCT
CDS Sequence
Protein Sequence