Gene Details:

• Gene ID: AT4G23500
• Gene Symbol: PGF12
• Gene Name: Polygalacturonase Clade F 12
• Description: Pectin lyase-like superfamily protein;(source:Araport11)
• TAIR Accession: locus:2117964
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT4G23500.1

Gene Ontology:

• GO:0043436  — acts upstream of or within — oxoacid metabolic process
• GO:0009505  — located in — plant-type cell wall
• GO:0005975  — involved in — carbohydrate metabolic process
• GO:0080090  — acts upstream of or within — regulation of primary metabolic process
• GO:0006325  — acts upstream of or within — chromatin organization
• GO:0016053  — acts upstream of or within — organic acid biosynthetic process
• GO:0004650  — enables — polygalacturonase activity
• GO:0062012  — acts upstream of or within — regulation of small molecule metabolic process
• GO:0009266  — acts upstream of or within — response to temperature stimulus
• GO:0031326  — acts upstream of or within — regulation of cellular biosynthetic process
• GO:0009059  — acts upstream of or within — macromolecule biosynthetic process
• GO:0009414  — acts upstream of or within — response to water deprivation
• GO:0005576  — located in — extracellular region

Literature:

• Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes: identification by mass spectrometry and bioinformatics.   DOI:  10.1002/pmic.200400882 ;  PMID:  15593128
• Salinity stress adaptation competence in the extremophile Thellungiella halophila in comparison with its relative Arabidopsis thaliana.   DOI:  10.1111/j.1365-313X.2005.02587.x ;  PMID:  16297073
• Patterns of expansion and expression divergence in the plant polygalacturonase gene family.   DOI:  10.1186/gb-2006-7-9-r87 ;  PMID:  17010199
• Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana.   DOI:  10.1093/molbev/msq204 ;  PMID:  20736450
• The pectin lyases in Arabidopsis thaliana: evolution, selection and expression profiles.   DOI:  10.1371/journal.pone.0046944 ;  PMID:  23056537
• Biochemical characterization of Arabidopsis clade F polygalacturonase shows a substrate preference toward oligogalacturonic acids.   DOI:  10.1016/j.jbiosc.2021.08.007 ;  PMID:  34690060
• Microtubule-associated ROP interactors affect microtubule dynamics and modulate cell wall patterning and root hair growth.   DOI:  10.1242/dev.200811 ;  PMID:  36314989
• Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes: identification by mass spectrometry and bioinformatics.   DOI:  10.1002/pmic.200400882 ;  PMID:  15593128

Sequences: