Gene Details:
- Gene ID: AT4G23440
- Gene Symbol: TN17
- Gene Name: TIR-NBS17
- Description: Disease resistance protein (TIR-NBS class);(source:Araport11)
- TAIR Accession: locus:2117899
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0000725 — involved in — recombinational repair
- GO:0006629 — acts upstream of or within — lipid metabolic process
- GO:0009059 — acts upstream of or within — macromolecule biosynthetic process
- GO:0005634 — located in — nucleus
- GO:0009888 — acts upstream of or within — tissue development
- GO:0007165 — involved in — signal transduction
- GO:1901615 — acts upstream of or within — organic hydroxy compound metabolic process
- GO:0040007 — acts upstream of or within — growth
Function-related keywords:
- shoot axis apex , leaf lamina base , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- TIR-X and TIR-NBS proteins: two new families related to disease resistance TIR-NBS-LRR proteins encoded in Arabidopsis and other plant genomes. DOI: 10.1046/j.1365-313x.2002.01404.x ; PMID: 12366802
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Global expression analysis of nucleotide binding site-leucine rich repeat-encoding and related genes in Arabidopsis. DOI: 10.1186/1471-2229-7-56 ; PMID: 17956627
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- The TIR-NBS protein TN13 associates with the CC-NBS-LRR resistance protein RPS5 and contributes to RPS5-triggered immunity in Arabidopsis. DOI: 10.1111/tpj.15345 ; PMID: 33982335
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
Sequences:
cDNA Sequence
- >AT4G23440.1
CCCAATCTCTGTCTTCTCTTCCTCCTTTTGAACAACATTTCAAGAGAATAGAGATAAAGATCTCTAAAAGAAAGAGAAAGAGAGTGTTGTGATTTTGTGTGCTTTGTATGATTTGACAGTGCCCATGTTTCTGTTTATTGGATAAAGACCTCTAAAATTACTTTCTCTAGATAGATACATATTCGAACTCAAACCGGAGAGCTCTGAAAAAAACCTGAAAGATTGAGTTTTTAGGGTTCTTGATTCTTCTAAAGTTCCTGGGTTTGATTGATACAAAGAGCTCAAGATGATCTTGTTCCGACCAATATTGGCTTCAATGGATTCATAGGGCTGCATTTATGGGATTTGATAGATTGTCAATAAAAGAAAACTTGTGGTTATGGATTCTCGAGGTGACAGTTCTAGGTTCGGGCAATATCCGACAAAGCCTACAAGGAACATGTCTTCATCTTCATCAGCTGCTTTCTTCTCAGCTAATCAGTCTCCGTTTTTCTCACCAAGATCTCCTAAAATCCAACAAGAACTATCTGAATCTACTCGCTCTGATGCTCAATGTGATAGCTTTGATCCTCTTAGCTCCAGCTCTGGTTTTCAAGAGCCTGAGCTTGCGTTTTTAACCGCTCCTAATCAATGTCAGAGCCTTGAGGCTGCTGATCGAATCGCTTCGAGTAGTATGATCTCTTGTACTCCTTCTAGATATGGAAGAGGTCATGAGTCTTCTTCGTATACTCAGACATCTTCTGTATCTGTTTCTTATAATAGGTTGAGATGTTGTGATGTGTTTATAGGATTGTATGGTCAGAAGCCTTCTTTGCTTCGGTTTGCGGATTGGCTTAGAGCTGAGTTAGAGTTTCAAGGGATGAGTTGTTTTATGTCGGATAGAGGAAGATGTAGGAGTTCACGGAAACAGAGAATAGTTGAGAGAGCGATGGATGGTGCGTCGTTTGGAGTTATAATACTAACGAGAAAGGCGTTTAAGAATCCTTATACGATTGAGGAGCTACGGTTTTTCGCAAACAAGAAGAATCTTGTTCCGGTTTTCTTTGATCTTTCTCCTGGAGAGTGTCTTGTGAGAGATATAGTTGAGAAGAGAGGAGATTTGTGGGAGAAACATGGAGGGGAATTGTGGGTTTTGTATGGTGGGATTGAGAAAGAATGGAAAGAGGCGGTTCACGGGCTATCGCGGGTTGATGATTGGAAGCTTGAAGCTCATGAAGGTAACTGGAGAGATTGTGTTTTCAGGGCGGTTACTTTATTGGCAATGCGGTTAGGGAGGAGAAGTATAGTGGAACGGTTAACGAAATGGCGGGATAAAGCGGAGAAAGAGGAGTTTCCGTATCCGCGGAATGAGAGTTTTGTTGGGAGGAAGAAGGAGTTATCTGAGCTAGAGTTTGTTTTATTTGGAGATGTTGCTGGAGATTCTGAAAGGGATTACTTTGAGTTAAAGGCAAGGCCGACAAGAAGGAAGAAGAACGTGACGCTCGGGTGGAATAAAAGCGGTTCAGCGGAAGAAAGACGGAAGAAAGGGAAGGAAAAAGTTGTGTGGAAGGAGTCAGAGAAAGAGATTGAGATGCAAAGTACAGAGATGCCTTCACGGAGTCAAGTGAAAGTAGGGCGAAACACGAGGAGAAAACGGTCGATGAAGGTTGTTTACGGGAAAGGCGTGGCTTGCGTGTCAGGTGAATCAGGGATTGGAAAAACTGAGCTGCTTCTTGAATTTGCTTACAGGCATCACCAAAGGTATAAGATGGTTCTTTGGATAGGTGGTGAGAGCCGTTACATAAGACAGAACTATCTGAATCTTTATCAGTATTTGGAAGTCGACATCGGGATAGAGAATTCTTCGGATAAAACGCGGATGAAGAGCTTCGAAGAGCAAGAAGATGCTGCGGTTTCCAAGATTAGAAAAGAGCTGATGAGGAATATACCGTTCTTGGTTGTCATTGATAACTTGGAGAGTGAAAAAGACTGGTGGGATTCGAAGCTTGTGATGGATCTTCTTCCTCGGTTTGGAGGCGGGACTCATATTTTGATATCTACACGTCTCTCTCAAGTTATGAACATGGAGCCGTTGAAACTCTCTTACCTCTCTGGTGCTGAAGCTATGTCGTTGATGCAGGGGAATGTTAAAGATTATCCGGTTTCGGAAATGGATGCATTGAGAACTATTGAAGATAAACTCGGACGGTTAACGTTGGGATTAGCAGTCGTAGGAGCAATATTGTCAGAGCTTCCTATAAACCCGAGCCGGCTTTTGGATACTATAAATAGAATGCCGTTAAGAGAGATGGTGTGTAGTGGTCGAGAGGGGAATCTGTTGAGAAGAAATGCGTTTCTGTTGCAGCTGTTTGAAGTTTGTTTTTCGATCTTTGATCACGCGGATGGACCTAGAAGTTTGGCTACGAGAATGGTTGTTGCTAGTGGGTGGTTAGCTCCTGCACCAGTTCCAGCTTCTTTATTAGCTTTGGCTGCTCATAAACTCCCTGAGAAACACAGAGGTCCGAAGCGGCTATGGAGAAGACTAAGGCGCGCTATAACCTGCGGTTTTACGTCTTCAAACTCCAAACGATCAGGAGCTGAAGCTGCTTCAATGCTACTTAGATTCAACATTGCTCGAACCAGCAGCATCAAGCTAGGGTTTATACAGATCCACGAGCTTGTGAAACTCTATGCGAGAAATCGAGTACTGGTCAATGAAAACGCTCCCGCAATGGTTCAGGCGGTGATAAGCCGCGGCTCGACTGTTGAAACCGCAGAGCAGATCTGGGCGGTTTGTTTCTTGCTGTTTGGTTTTAGCAACGAATCTCCGACTATTCAGCTGAAGATAACAGAGCTGCTGATTCTTGTGAAACAAGTAATCTTGCCTCTTGCAATCAGAACGTTCATATCATTTTCGCGATGCACAGCCTCAGTGGAGCTACTAAGGGTCTGCACAAACGCACTTGAAGCAGCTGACCAAACGCTAGTGACACCAGTAGAGAAATGGCTAGACAAGTCGCTTTGCTGGAGACCAGTTCAGACAAGTGCACAACTAAACCCTATTCTATGGGAAGAACTTGCTCTAGCTCGAGCCACCGTGCTAGAGACTCGAGCTAAGCTGATGTTACGAGGCGGGCAATTTGGTTTGGCTGATGACTTGATCAGAAAAGCAATCTTCATAAGAACTTCGATCTCAGGAGAGGATCATCCTGGGACTGTGTCGGCTCGAGAGACATTGAGTAAGTTAACGAGGCTTTTATCCAATGTTCATCAGATTCATAACACTTCACCGTAATAGAGAGAAGCTTTTAGGGCTTTCTTGTTGTAAAAGTTATAAAGGTTAGAGTTTCTTGTTTTTTTTTAATTATCATTATTTTAGTCATAAGAGTTAGATTTATACAGAAGGTTTAGTAATAAAAAAAACTGTTATCTAAGAAATTTGTCAGAGAATCCTTTTTTATC - >AT4G23440.2
CCCAATCTCTGTCTTCTCTTCCTCCTTTTGAACAACATTTCAAGAGAATAGAGATAAAGATCTCTAAAAGAAAGAGAAAGAGAGTGTTGTGATTTTGTGTGCTTTGTATGATTTGACAGTGCCCATGTTTCTGTTTATTGGATAAAGACCTCTAAAATTACTTTCTCTAGATAGATACATATTCGAACTCAAACCGGAGAGCTCTGAAAAAAACCTGAAAGATTGAGTTTTTAGGGTTCTTGATTCTTCTAAAGTTCCTGGGTTTGATTGATACAAAGAGCTCAAGATGATCTTGTTCCGACCAATATTGGCTTCAATGGATTCATAGGGCTGCATTTATGGGATTTGATAGATTGTCAATAAAAGAAAACTTGTGGTTATGGATTCTCGAGGTGACAGTTCTAGGTTCGGGCAATATCCGACAAAGCCTACAAGGAACATGTCTTCATCTTCATCAGCTGCTTTCTTCTCAGCTAATCAGTCTCCGTTTTTCTCACCAAGATCTCCTAAAATCCAACAAGAACTATCTGAATCTACTCGCTCTGATGCTCAATGTGATAGCTTTGATCCTCTTAGCTCCAGCTCTGGTTTTCAAGAGCCTGAGCTTGCGTTTTTAACCGCTCCTAATCAATGTCAGAGCCTTGAGGCTGCTGATCGAATCGCTTCGAGTAGTATGATCTCTTGTACTCCTTCTAGATATGGAAGAGGTCATGAGTCTTCTTCGTATACTCAGACATCTTCTGTATCTGTTTCTTATAATAGGTTGAGATGTTGTGATGTGTTTATAGGATTGTATGGTCAGAAGCCTTCTTTGCTTCGGTTTGCGGATTGGCTTAGAGCTGAGTTAGAGTTTCAAGGGATGAGTTGTTTTATGTCGGATAGAGGAAGATGTAGGAGTTCACGGAAACAGAGAATAGTTGAGAGAGCGATGGATGGTGCGTCGTTTGGAGTTATAATACTAACGAGAAAGGCGTTTAAGAATCCTTATACGATTGAGGAGCTACGGTTTTTCGCAAACAAGAAGAATCTTGTTCCGGTTTTCTTTGATCTTTCTCCTGGAGAGTGTCTTGTGAGAGATATAGTTGAGAAGAGAGGAGATTTGTGGGAGAAACATGGAGGGGAATTGTGGGTTTTGTATGGTGGGATTGAGAAAGAATGGAAAGAGGCGGTTCACGGGCTATCGCGGGTTGATGATTGGAAGCTTGAAGCTCATGAAGGTAACTGGAGAGATTGTGTTTTCAGGGCGGTTACTTTATTGGCAATGCGGTTAGGGAGGAGAAGTATAGTGGAACGGTTAACGAAATGGCGGGATAAAGCGGAGAAAGAGGAGTTTCCGTATCCGCGGAATGAGAGTTTTGTTGGGAGGAAGAAGGAGTTATCTGAGCTAGAGTTTGTTTTATTTGGAGATGTTGCTGGAGATTCTGAAAGGGATTACTTTGAGTTAAAGGCAAGGCCGACAAGAAGGAAGAAGAACGTGACGCTCGGGTGGAATAAAAGCGGTTCAGCGGAAGAAAGACGGAAGAAAGGGAAGGAAAAAGTTGTGTGGAAGGAGTCAGAGAAAGAGATTGAGATGCAAAGTACAGAGATGCCTTCACGGAGTCAAGTGAAAGTAGGGCGAAACACGAGGAGAAAACGGTCGATGAAGGTTGTTTACGGGAAAGGCGTGGCTTGCGTGTCAGGTGAATCAGGGATTGGAAAAACTGAGCTGCTTCTTGAATTTGCTTACAGGCATCACCAAAGGTATAAGATGGTTCTTTGGATAGGTGGTGAGAGCCGTTACATAAGACAGAACTATCTGAATCTTTATCAGTATTTGGAAGTCGACATCGGGATAGAGAATTCTTCGGATAAAACGCGGATGAAGAGCTTCGAAGAGCAAGAAGATGCTGCGGTTTCCAAGATTAGAAAAGAGCTGATGAGGAATATACCGTTCTTGGTTGTCATTGATAACTTGGAGAGTGAAAAAGACTGGTGGGATTCGAAGCTTGTGATGGATCTTCTTCCTCGGTTTGGAGGCGGGACTCATATTTTGATATCTACACGTCTCTCTCAAGTTATGAACATGGAGCCGTTGAAACTCTCTTACCTCTCTGGTGCTGAAGCTATGTCGTTGATGCAGGGGAATGTTAAAGATTATCCGGTTTCGGAAATGGATGCATTGAGAACTATTGAAGATAAACTCGGACGGTTAACGTTGGGATTAGCAGTCGTAGGAGCAATATTGTCAGAGCTTCCTATAAACCCGAGCCGGCTTTTGGATACTATAAATAGAATGCCGTTAAGAGAGATGGTGTGTAGTGGTCGAGAGGGGAATCTGTTGAGAAGAAATGCGTTTCTGTTGCAGCTGTTTGAAGTTTGTTTTTCGATCTTTGATCACGCGGATGGACCTAGAAGTTTGGCTACGAGAATGGTTGTTGCTAGTGGGTGGTTAGCTCCTGCACCAGTTCCAGCTTCTTTATTAGCTTTGGCTGCTCATAAACTCCCTGAGAAACACAGAGGTCCGAAGCGGCTATGGAGAAGACTAAGGCGCGCTATAACCTGCGGTTTTACGTCTTCAAACTCCAAACGATCAGGAGCTGAAGCTGCTTCAATGCTACTTAGATTCAACATTGCTCGAACCAGCAGCATCAAGCTAGGGTTTATACAGATCCACGAGCTTGTGAAACTCTATGCGAGAAATCGAGTACTGGTCAATGAAAACGCTCCCGCAATGGTTCAGGCGGTGATAAGCCGCGGCTCGACTGTTGAAACCGCAGAGCAGATCTGGGCGGTTTGTTTCTTGCTGTTTGGTTTTAGCAACGAATCTCCGACTATTCAGCTGAAGATAACAGAGCTGCTGATTCTTGTGAAACAAGTAATCTTGCCTCTTGCAATCAGAACGTTCATATCATTTTCGCGATGCACAGCCTCAGTGGAGCTACTAAGGGTCTGCACAAACGCACTTGAAGCAGCTGACCAAACGCTAGTGACACCAGTAGAGAAATGGCTAGACAAGTCGCTTTGCTGGAGACCAGTTCAGACAAGTGCACAACTAAACCCTATTCTATGGGAAGAACTTGCTCTAGCTCGAGCCACCGTGCTAGAGACTCGAGCTAAGCTGATGTTACGAGGCGGGCAATTTGGTTTGGCTGATGACTTGATCAGAAAAGCAATCTTCATAAGAACTTCGATCTCAGGAGAGGATCATCCTGGGACTGTGTCGGCTCGAGAGACATTGAGTAAGTTAACGAGGCTTTTATCCAATGTTCATCAGATTCATAACACTTCACCGTAATAGAGAGAAGCTTTTAGGGCTTTCTTGTTGTAAAAGTTATAAAGGTTAGAGTTTCTTGTTTTTTTTTAATTATCATTATTTTAGTCATAAGAGTTAGATTTATACAGAAGGTTTAGTAATAAAAAAAACTGTTATCTAAGAAATTTGTCAGAGAATCCTTTTTTATC
CDS Sequence
Protein Sequence