Information report for AT4G23060
Gene Details
|
|
Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Functional Keywords
Literature and News
- Detecting the undetectable: uncovering duplicated segments in Arabidopsis by comparison with rice. DOI: 10.1016/s0168-9525(02)02796-8 ; PMID: 12446138
- The FHY3 and FAR1 genes encode transposase-related proteins involved in regulation of gene expression by the phytochrome A-signaling pathway. DOI: 10.1046/j.1365-313x.2003.01741.x ; PMID: 12753585
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Genome-wide comparative analysis of the IQD gene families in Arabidopsis thaliana and Oryza sativa. DOI: 10.1186/1471-2148-5-72 ; PMID: 16368012
- Comparison between a coffee single copy chromosomal region and Arabidopsis duplicated counterparts evidenced high level synteny between the coffee genome and the ancestral Arabidopsis genome. DOI: 10.1007/s11103-007-9191-6 ; PMID: 17551672
- Global analysis of della direct targets in early gibberellin signaling in Arabidopsis. DOI: 10.1105/tpc.107.054999 ; PMID: 17933900
- The IQD Family of Calmodulin-Binding Proteins Links Calcium Signaling to Microtubules, Membrane Subdomains, and the Nucleus. DOI: 10.1104/pp.16.01743 ; PMID: 28115582
- Functions of IQD proteins as hubs in cellular calcium and auxin signaling: A toolbox for shape formation and tissue-specification in plants? DOI: 10.1080/15592324.2017.1331198 ; PMID: 28534650
Gene Resources
- UniProt: A0A654FRX6
- EMBL: CACRSJ010000109, CACSHJ010000095
- AlphaFoldDB: A0A654FRX6
- EnsemblPlants: AT4G23060.1
- Gramene: AT4G23060.1
- KEGG: ath:AT4G23060
- Orthologous matrix: NNSPQFY
- ExpressionAtlas: AT4G23060
- InterPro: IPR000048, IPR025064
- PANTHER: PTHR32295, PTHR32295:SF11
- PROSITE: PS50096
- OrthoDB: A0A654FRX6
- SWISS-MODEL: A0A654FRX6
- Conserved Domain Database: cd23767
Sequences
cDNA Sequence
- >AT4G23060.1
ATTTTACTTCCTCAGATTCACATGACCAAATCATGTAACCATTTTCCAAATAAAATCTTTACATTTAGATTTAGATTCAGAGGAATTGAATTAGCCTCATCATAATGTATGATACTACATACTACACTAGTGACACGGAAATTACACGACGAAAATAAACAATGTGAAGAATAACGAAATTTCCCGGGAAAAGAGAGATAGAGAGTGAGACACACGCGCGAGTGATGCGTGTGGTAGTAAATAGAACACTGTTTGATGATACTGCTGCGACTACTTAACTCTTATTACAAAGCTCTCTTTTTGTTGTCTCTCTCTTGCTCTCTCTGCAAAACTCCGGCGAGAAGAGAACGTTGTCGTTTCATTCGTATCAAAGTCTTCATCAGCAATGGGAAAAGCGTCACGGTGGTTTAGGAGTCTATTCGGAGTTAAGAAACCCGACCCGGGTTATCCGGATCTATCCGTCGAGACGCCTTCTCGGTCAACTTCCTCTAATCTCAAACGCCGATGGAGTTTCGTCAAATCCAAACGAGAAAAAGAAAGTACACCGATTAATCAAGTTCCTCATACTCCATCGCTACCGAATTCGACGCCTCCACCGCCGTCTCACCACCAATCGTCGCCGAGACGACGGAGAAAACAAAAGCCGATGTGGGAGGATGAGGGAAGTGAAGATTCGGACAAGCATGCTATTGCGGTGGCTGCCGCGACTGCTGCGGTTGCTGAAGCTGCAGTCGCCGCCGCTAATGCTGCTGCTGCGGTCGTCAGGCTGACGAGCACAAGTGGGAGGTCGACTCGAAGTCCTGTTAAGGCACGGTTTAGCGACGGATTCGACGACGTGGTGGCGCATGGTAGCAAGTTTTATGGACACGGCCGTGACAGTTGTGAACTTGCGGTGATTAAGATACAATCTATATTTCGCGGATACTTGGCAAAGAGAGCGTTAAGGGCACTCAAGGGTTTGGTTAGGCTTCAAGCGATAGTTAGAGGCCATATCGAAAGAAAGAGAATGTCAGTCCATCTGCGCAGGATGCACGCTTTGGTTCGAGCTCAGGCTCGTGTGCGTGCCACTCGGGTTATTGTCACGCCTGAATCTTCTTCTTCTCAATCCAACAATACCAAATCTTCTCACTTCCAAAACCCTGGTCCACCAACTCCGGAAAAACTCGAGCATTCGATCTCTTCTCGCAGCTCCAAACTCGCTCATTCTCATCTTTTCAAGAGGAATGGTTCGAAGGCAAGCGACAACAACAGACTGTACCCTGCTCACAGGGAGACATTCTCAGCCACAGACGAAGAAGAAAAGATTCTTCAAATCGACAGGAAACACATCAGTTCTTACACAAGACGCAACAGACCAGACATGTTCTACTCATCCCACCTCATCCTAGACAATGCTGGCCTGTCTGAACCAGTTTTCGCCACGCCTTTTAGCCCGTCCTCGTCGCATGAAGAGATTACAAGCCAGTTTTGCACTGCAGAGAACAGTCCTCAGTTATACTCAGCTACTTCTAGAAGCAAACGCAGTGCTTTCACCGCTAGTTCTATAGCACCGAGCGATTGCACAAAAAGCTGCTGTGATGGTGACCATCCAAGCTACATGGCTTGTACAGAGTCCTCTAGGGCTAAGGCTAGGTCCGCTAGTGCCCCGAAGTCTCGACCACAGTTATTTTACGAGCGGCCTTCATCAAAACGGTTTGGATTTGTTGATTTGCCGTACTGTGGTGATACAAAGTCCGGTCCCCAGAAAGGCTCTGCTCTGCATACTAGTTTTATGAACAAGGCTTATCCCGGTTCAGGTCGGTTGGACCGTCTCGGGATGCCAATTGGGTATAGGTACTGAGAACGTTGTTGGACCCTTTAACCTGGTTTTGTTGTAGATCAGTGGATTGAGCTTTGCTTCTAATTTTCTTTGTTTGTAGTTTGGAGCTAAGTGGATTTAATCTAAAATGCAAATAGAACTTGCTTAATCAAAATGTTTGCATCTCTATAAAGCATTGTCATTTGCCTAGACTTTAGTTGTTATCAAAAATTTTATGAATATGAAGGAAACCAAGAGCTATAACAGATATATTTGGTGTAATAACAAAAACGTCTAACACTAAAAAAATTGACAAGAAAATGTCATGTCCATTGGGATTTAGAGGAG
CDS Sequence
Protein Sequence