Information report for AT4G22950
Gene Details
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Functional Descriptions
- PO:0006036 — root epidermis — epidermis de la raíz (Spanish, exact), 根表皮 (Japanese, exact), epiblem (related), rhizodermis (related)
- PO:0020131 — lateral root cap — caliptra lateral de la raíz (Spanish, exact), 側根冠 (Japanese, exact), peripheral cells (related)
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- PO:0000014 — rosette leaf — hoja en roseta (Spanish, exact), ロゼット葉 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- MADS-box gene evolution beyond flowers: expression in pollen, endosperm, guard cells, roots and trichomes. DOI: 10.1046/j.1365-313x.2000.00891.x ; PMID: 11115127
- Molecular and phylogenetic analyses of the complete MADS-box transcription factor family in Arabidopsis: new openings to the MADS world. DOI: 10.1105/tpc.011544 ; PMID: 12837945
- Evolution and divergence of the MADS-box gene family based on genome-wide expression analyses. DOI: 10.1093/molbev/msg216 ; PMID: 12949148
- Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: and shoot-specific genes. DOI: 10.1111/j.1365-313X.2004.02051.x ; PMID: 15078338
- Transcriptional profiling by cDNA-AFLP and microarray analysis reveals novel insights into the early response to ethylene in Arabidopsis. DOI: 10.1111/j.1365-313X.2004.02156.x ; PMID: 15272873
- Gene family analysis of the Arabidopsis pollen transcriptome reveals biological implications for cell growth, division control, and gene expression regulation. DOI: 10.1104/pp.104.057935 ; PMID: 15908605
- Nutritional regulation of ANR1 and other root-expressed MADS-box genes in Arabidopsis thaliana. DOI: 10.1007/s00425-005-0020-3 ; PMID: 16021502
- Polycomb-group proteins repress the floral activator AGL19 in the FLC-independent vernalization pathway. DOI: 10.1101/gad.377206 ; PMID: 16778081
- ARABIDOPSIS TRITHORAX1 dynamically regulates FLOWERING LOCUS C activation via histone 3 lysine 4 trimethylation. DOI: 10.1105/tpc.108.058172 ; PMID: 18375656
- Arabidopsis histone deacetylase HDA9 regulates flowering time through repression of AGL19. DOI: 10.1016/j.bbrc.2012.11.102 ; PMID: 23237803
- Gene regulatory variation mediates flowering responses to vernalization along an altitudinal gradient in Arabidopsis. DOI: 10.1104/pp.114.247346 ; PMID: 25339407
- Repression of flowering under a noninductive photoperiod by the HDA9-AGL19-FT module in Arabidopsis. DOI: 10.1111/nph.13161 ; PMID: 25406502
- Regulatory network for FOREVER YOUNG FLOWER-like genes in regulating Arabidopsis flower senescence and abscission. DOI: 10.1038/s42003-022-03629-w ; PMID: 35790878
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- MADS-box gene evolution beyond flowers: expression in pollen, endosperm, guard cells, roots and trichomes. DOI: 10.1046/j.1365-313x.2000.00891.x ; PMID: 11115127
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
- Polycomb-group proteins repress the floral activator AGL19 in the FLC-independent vernalization pathway. DOI: 10.1101/gad.377206 ; PMID: 16778081
Gene Resources
- UniProt: A0A178V3F3
- EMBL: CACRSJ010000109, LUHQ01000004
- AlphaFoldDB: A0A178V3F3
- EnsemblPlants: AT4G22950.1, AT4G22950.3
- Gramene: AT4G22950.1, AT4G22950.3
- KEGG: ath:AT4G22950
- ExpressionAtlas: AT4G22950
Sequences
cDNA Sequence
- >AT4G22950.1
AAAAATAAAAGTGATGTACTACTAGGCAGGTCTAGGTTTATATAGACTATCCGTAGCCATAAGAGAAAATGGCAAATTTAATATATAATGCAAAAAAGAATAAGGCTATGATGTCAAATTATCAATCAAAAACACTTAGTTTTTTTCTTTCTTTCTTTCTCTCCCCTCCTTCATCATAAATCTAGGGCTTTCCAAGAATCTCTATCACACCCTCTTCCCAAAATCTCGCCTATTTTTCCTCTCTCCACTCACTTATAGAAGATAGATTATACACATAGAGAGACACATCAATCCAAAGCTCATACTTACAAATAGGAATATTTATATAAAGAATAAACTAGAAGTAAAGGATGGTGAGGGGCAAAACGGAGATGAAGAGGATAGAGAACGCAACAAGCAGGCAAGTGACGTTTTCGAAGAGAAGAAATGGACTCTTGAAGAAAGCCTTCGAATTATCGGTCCTTTGTGATGCTGAAGTTGCTTTGGTTATCTTCTCTCCAAGATCCAAACTCTATGAGTTCTCTAGCTCTAGTATAGCAGCAACAATTGAACGCTATCAGAGACGAATAAAAGAAATTGGGAATAATCATAAGAGAAATGATAATTCTCAGCAAGCGAGAGACGAAACATCTGGATTGACAAAAAAGATTGAACAGCTAGAGATATCTAAACGAAAATTGCTTGGAGAAGGCATTGATGCATGTTCCATCGAGGAGCTGCAACAGTTAGAGAATCAGTTGGACCGAAGCTTGAGCAGGATAAGAGCCAAGAAGTACCAATTACTCCGTGAAGAAATTGAGAAGTTGAAGGCAGAGGAGAGGAATCTCGTTAAGGAAAATAAAGATCTGAAGGAGAAGTGGCTTGGAATGGGAACAGCAACAATAGCATCATCACAATCAACGTTATCATCATCAGAAGTGAACATAGATGACAATATGGAAGTGGAGACTGGTTTGTTCATTGGACCTCCTGAGACAAGACAATCCAAAAAATTCCCTCCTCAAAATTAATCTTACAACTTCTTCAAAAAGAATGTTTTAACTATATGATGTAAGAACTTTTTATCTTTATATATTTTCGTCCAAAAAAATTGAGATGTAATAATTAATATGTTCTTAATCAAAGAGTTAAA - >AT4G22950.2
AAAAATAAAAGTGATGTACTACTAGGCAGGTCTAGGTTTATATAGACTATCCGTAGCCATAAGAGAAAATGGCAAATTTAATATATAATGCAAAAAAGAATAAGGCTATGATGTCAAATTATCAATCAAAAACACTTAGTTTTTTTCTTTCTTTCTTTCTCTCCCCTCCTTCATCATAAATCTAGGGCTTTCCAAGAATCTCTATCACACCCTCTTCCCAAAATCTCGCCTATTTTTCCTCTCTCCACTCACTTATAGAAGATAGATTATACACATAGAGAGACACATCAATCCAAAGCTCATACTTACAAATAGGAATATTTATATAAAGAATAAACTAGAAGTAAAGGATGGTGAGGGGCAAAACGGAGATGAAGAGGATAGAGAACGCAACAAGCAGGCAAGTGACGTTTTCGAAGAGAAGAAATGGACTCTTGAAGAAAGCCTTCGAATTATCGGTCCTTTGTGATGCTGAAGTTGCTTTGGTTATCTTCTCTCCAAGATCCAAACTCTATGAGTTCTCTAGCTCTAGTATAGCAGCAACAATTGAACGCTATCAGAGACGAATAAAAGAAATTGGGAATAATCATAAGAGAAATGATAATTCTCAGCAAGCGAGAGACGAAACATCTGGATTGACAAAAAAGATTGAACAGCTAGAGATATCTAAACGAAAATTGCTTGGAGAAGGCATTGATGCATGTTCCATCGAGGAGCTGCAACAGTTAGAGAATCAGTTGGACCGAAGCTTGAGCAGGATAAGAGCCAAGAAGTACCAATTACTCCGTGAAGAAATTGAGAAGTTGAAGGCAGAGGAGAGGAATCTCGTTAAGGAAAATAAAGATCTGAAGGAGAAGTGGCTTGGAATGGGAACAGCAACAATAGCATCATCACAATCAACGTTATCATCATCAGAAGTGAACATAGATGACAATATGGAAGTGGAGACTGGTTTGTTCATTGGACCTCCTGAGACAAGACAATCCAAAAAATTCCCTCCTCAAAATTAATCTTACAACTTCTTCAAAAAGAATGTTTTAACTATATGATGTAAGAACTTTTTATCTTTATATATTTTCGTCCAAAAAAATTGAGATGTAATAATTAATATGTTCTTAATCAAAGAGTTAAA - >AT4G22950.3
AAAAATAAAAGTGATGTACTACTAGGCAGGTCTAGGTTTATATAGACTATCCGTAGCCATAAGAGAAAATGGCAAATTTAATATATAATGCAAAAAAGAATAAGGCTATGATGTCAAATTATCAATCAAAAACACTTAGTTTTTTTCTTTCTTTCTTTCTCTCCCCTCCTTCATCATAAATCTAGGGCTTTCCAAGAATCTCTATCACACCCTCTTCCCAAAATCTCGCCTATTTTTCCTCTCTCCACTCACTTATAGAAGATAGATTATACACATAGAGAGACACATCAATCCAAAGCTCATACTTACAAATAGGAATATTTATATAAAGAATAAACTAGAAGTAAAGGATGGTGAGGGGCAAAACGGAGATGAAGAGGATAGAGAACGCAACAAGCAGGCAAGTGACGTTTTCGAAGAGAAGAAATGGACTCTTGAAGAAAGCCTTCGAATTATCGGTCCTTTGTGATGCTGAAGTTGCTTTGGTTATCTTCTCTCCAAGATCCAAACTCTATGAGTTCTCTAGCTCTAGTATAGCAGCAACAATTGAACGCTATCAGAGACGAATAAAAGAAATTGGGAATAATCATAAGAGAAATGATAATTCTCAGCAAGCGAGAGACGAAACATCTGGATTGACAAAAAAGATTGAACAGCTAGAGATATCTAAACGAAAATTGCTTGGAGAAGGCATTGATGCATGTTCCATCGAGGAGCTGCAACAGTTAGAGAATCAGTTGGACCGAAGCTTGAGCAGGATAAGAGCCAAGAAGTACCAATTACTCCGTGAAGAAATTGAGAAGTTGAAGGCAGAGGAGAGGAATCTCGTTAAGGAAAATAAAGATCTGAAGGAGAAGTGGCTTGGAATGGGAACAGCAACAATAGCATCATCACAATCAACGTTATCATCATCAGAAGTGAACATAGATGACAATATGGAAGTGGAGACTGGTTTGTTCATTGGACCTCCTGAGACAAGACAATCCAAAAAATTCCCTCCTCAAAATTAATCTTACAACTTCTTCAAAAAGAATGTTTTAACTATATGATGTAAGAACTTTTTATCTTTATATATTTTCGTCCAAAAAAATTGAGATGTAATAATTAATATGTTCTTAATCAAAGAGTTAAA
CDS Sequence
Protein Sequence