Information report for AT4G22890
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- The Arabidopsis TDS4 gene encodes leucoanthocyanidin dioxygenase (LDOX) and is essential for proanthocyanidin synthesis and vacuole development. DOI: 10.1046/j.1365-313x.2003.01834.x ; PMID: 12940955
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. DOI: 10.1105/tpc.017814 ; PMID: 14729914
- New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. DOI: 10.1074/jbc.M406763200 ; PMID: 15322131
- Transcriptional profile of the Arabidopsis root quiescent center. DOI: 10.1105/tpc.105.031724 ; PMID: 15937229
- A complex containing PGRL1 and PGR5 is involved in the switch between linear and cyclic electron flow in Arabidopsis. DOI: 10.1016/j.cell.2007.12.028 ; PMID: 18243102
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Drought stress-induced upregulation of components involved in ferredoxin-dependent cyclic electron transfer. DOI: 10.1016/j.jplph.2010.02.006 ; PMID: 20392519
- PGRL1 is the elusive ferredoxin-plastoquinone reductase in photosynthetic cyclic electron flow. DOI: 10.1016/j.molcel.2012.11.030 ; PMID: 23290914
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- PROTON GRADIENT REGULATION 5 supports linear electron flow to oxidize photosystem I. DOI: 10.1111/ppl.12723 ; PMID: 29604096
- M-Type Thioredoxins Regulate the PGR5/PGRL1-Dependent Pathway by Forming a Disulfide-Linked Complex with PGRL1. DOI: 10.1105/tpc.20.00304 ; PMID: 33037145
- Commonalities and specialties in photosynthetic functions of PROTON GRADIENT REGULATION5 variants in Arabidopsis. DOI: 10.1093/plphys/kiac362 ; PMID: 35946785
- PGRL2 triggers degradation of PGR5 in the absence of PGRL1. DOI: 10.1038/s41467-021-24107-7 ; PMID: 34168134
- In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. DOI: 10.1105/tpc.017814 ; PMID: 14729914
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. DOI: 10.1074/jbc.M406763200 ; PMID: 15322131
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. DOI: 10.1105/tpc.017814 ; PMID: 14729914
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. DOI: 10.1074/jbc.M406763200 ; PMID: 15322131
- A complex containing PGRL1 and PGR5 is involved in the switch between linear and cyclic electron flow in Arabidopsis. DOI: 10.1016/j.cell.2007.12.028 ; PMID: 18243102
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. DOI: 10.1105/tpc.017814 ; PMID: 14729914
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. DOI: 10.1074/jbc.M406763200 ; PMID: 15322131
- A complex containing PGRL1 and PGR5 is involved in the switch between linear and cyclic electron flow in Arabidopsis. DOI: 10.1016/j.cell.2007.12.028 ; PMID: 18243102
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- A complex containing PGRL1 and PGR5 is involved in the switch between linear and cyclic electron flow in Arabidopsis. DOI: 10.1016/j.cell.2007.12.028 ; PMID: 18243102
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- A complex containing PGRL1 and PGR5 is involved in the switch between linear and cyclic electron flow in Arabidopsis. DOI: 10.1016/j.cell.2007.12.028 ; PMID: 18243102
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: A0A2H1ZEN5
- EMBL: CP002687
- AlphaFoldDB: A0A2H1ZEN5
- EnsemblPlants: AT4G22890.2
- Gramene: AT4G22890.2
- ExpressionAtlas: AT4G22890
- InterPro: IPR039987
- PANTHER: PTHR31032, PTHR31032:SF9
- OrthoDB: A0A2H1ZEN5
Sequences
cDNA Sequence
- >AT4G22890.2
AAAAAAATCAGAAGAAACCTGAGAAGCTCACAGTAAACACATCTTCAACCACAGGTTCATACTTACTGAAAAAAACAGAGGAAAAAAAGGAGCTCCCTTTTCTATCTCTAAGGGAAAATGGGTAGCAAGATGTTGTTTAGTTTGACAAGTCCTCGACTTTTCTCCGCCGTTTCTCGCAAACCTTCCTCTTCTTTCTCTCCTTCTCCTCCGTCGCCGTCTTCGAGGACTCAATGGACTCAGCTCAGCCCTGGAAAATCGATTTCTTTGAGAAGAAGAGTCTTCTTGTTGCCTGCTAAAGCCACAACAGAGCAATCAGGTCCAGTAGGAGGAGACAACGTCGATAGCAATGTTTTGCCCTATTGTAGCATCAACAAGGCTGAGAAGAAAACAATTGGTGAAATGGAACAAGAGTTTCTCCAAGCGTTGCAATCTTTCTATTATGATGGCAAAGCGATCATGTCTAATGAAGAGTTTGATAACCTTAAAGAAGAGTTAATGTGGGAAGGAAGCAGTGTTGTGATGCTAAGTTCCGATGAACAAAGATTCTTGGAAGCTTCCATGGCTTATGTTTCTGGAAATCCAATCTTGAATGATGAAGAATATGATAAGCTCAAACTCAAACTAAAGATTGATGGTAGCGACATTGTGAGCGAGGGTCCAAGATGCAGTCTCCGTAGTAAAAAGGTGTATAGTGATCTCGCTGTAGATTATTTCAAAATGTTATTGTTGAATGTTCCAGCAACCGTTGTTGCTCTCGGACTCTTTTTCTTCCTGGACGACATTACAGGTTTTGAGATCACATACATCATGGAGCTTCCAGAACCATACAGTTTCATATTCACTTGGTTCGCTGCTGTGCCTGTGATTGTATATCTGGCTTTATCAATCACCAAATTGATCATCAAGGACTTCTTGATCTTGAAGGGTCCTTGTCCGAATTGTGGAACGGAAAACACCTCCTTCTTTGGAACAATTCTGTCAATCTCCAGCGGCGGCAAAACCAACACTGTCAAATGCACCAAGTAAGATTTTACCTTCGAATATGGTTTCAAAAGTGTAACATATTACTATCTGATTCTTTGATTATCTCTGTTTTTAGCTGCGGAACCGCGATGGTGTATGACTCGGGTTCTAGGTTGATCACATTGCCAGAAGGAAGCCAAGCTTAAACCCTGTGAGCTAGATGAAGATGGGAAAAGAAGAATGGGTTTTGTCAGAAGCAAAATAGATTCGAAGTTAAATGTATATGTAAGATCTTCCATGTTAGCTCTCTCTCCTTCACATGTTTTCTGATTTGTAAGTATTGTGTGTAAGCAATAAGAGATATATAATATGAGCACTTCTTCATCTACCTTTGTAGATAAAAATATAATCATTACTATAGTTAAATCAAATTGTATACATGAAAGACCAA - >AT4G22890.4
AAAAAAATCAGAAGAAACCTGAGAAGCTCACAGTAAACACATCTTCAACCACAGGTTCATACTTACTGAAAAAAACAGAGGAAAAAAAGGAGCTCCCTTTTCTATCTCTAAGGGAAAATGGGTAGCAAGATGTTGTTTAGTTTGACAAGTCCTCGACTTTTCTCCGCCGTTTCTCGCAAACCTTCCTCTTCTTTCTCTCCTTCTCCTCCGTCGCCGTCTTCGAGGACTCAATGGACTCAGCTCAGCCCTGGAAAATCGATTTCTTTGAGAAGAAGAGTCTTCTTGTTGCCTGCTAAAGCCACAACAGAGCAATCAGGTCCAGTAGGAGGAGACAACGTCGATAGCAATGTTTTGCCCTATTGTAGCATCAACAAGGCTGAGAAGAAAACAATTGGTGAAATGGAACAAGAGTTTCTCCAAGCGTTGCAATCTTTCTATTATGATGGCAAAGCGATCATGTCTAATGAAGAGTTTGATAACCTTAAAGAAGAGTTAATGTGGGAAGGAAGCAGTGTTGTGATGCTAAGTTCCGATGAACAAAGATTCTTGGAAGCTTCCATGGCTTATGTTTCTGGAAATCCAATCTTGAATGATGAAGAATATGATAAGCTCAAACTCAAACTAAAGATTGATGGTAGCGACATTGTGAGCGAGGGTCCAAGATGCAGTCTCCGTAGTAAAAAGGTGTATAGTGATCTCGCTGTAGATTATTTCAAAATGTTATTGTTGAATGTTCCAGCAACCGTTGTTGCTCTCGGACTCTTTTTCTTCCTGGACGACATTACAGGTTTTGAGATCACATACATCATGGAGCTTCCAGAACCATACAGTTTCATATTCACTTGGTTCGCTGCTGTGCCTGTGATTGTATATCTGGCTTTATCAATCACCAAATTGATCATCAAGGACTTCTTGATCTTGAAGGGTCCTTGTCCGAATTGTGGAACGGAAAACACCTCCTTCTTTGGAACAATTCTGTCAATCTCCAGCGGCGGCAAAACCAACACTGTCAAATGCACCAAGTAAGATTTTACCTTCGAATATGGTTTCAAAAGTGTAACATATTACTATCTGATTCTTTGATTATCTCTGTTTTTAGCTGCGGAACCGCGATGGTGTATGACTCGGGTTCTAGGTTGATCACATTGCCAGAAGGAAGCCAAGCTTAAACCCTGTGAGCTAGATGAAGATGGGAAAAGAAGAATGGGTTTTGTCAGAAGCAAAATAGATTCGAAGTTAAATGTATATGTAAGATCTTCCATGTTAGCTCTCTCTCCTTCACATGTTTTCTGATTTGTAAGTATTGTGTGTAAGCAATAAGAGATATATAATATGAGCACTTCTTCATCTACCTTTGTAGATAAAAATATAATCATTACTATAGTTAAATCAAATTGTATACATGAAAGACCAA - >AT4G22890.3
AAAAAAATCAGAAGAAACCTGAGAAGCTCACAGTAAACACATCTTCAACCACAGGTTCATACTTACTGAAAAAAACAGAGGAAAAAAAGGAGCTCCCTTTTCTATCTCTAAGGGAAAATGGGTAGCAAGATGTTGTTTAGTTTGACAAGTCCTCGACTTTTCTCCGCCGTTTCTCGCAAACCTTCCTCTTCTTTCTCTCCTTCTCCTCCGTCGCCGTCTTCGAGGACTCAATGGACTCAGCTCAGCCCTGGAAAATCGATTTCTTTGAGAAGAAGAGTCTTCTTGTTGCCTGCTAAAGCCACAACAGAGCAATCAGGTCCAGTAGGAGGAGACAACGTCGATAGCAATGTTTTGCCCTATTGTAGCATCAACAAGGCTGAGAAGAAAACAATTGGTGAAATGGAACAAGAGTTTCTCCAAGCGTTGCAATCTTTCTATTATGATGGCAAAGCGATCATGTCTAATGAAGAGTTTGATAACCTTAAAGAAGAGTTAATGTGGGAAGGAAGCAGTGTTGTGATGCTAAGTTCCGATGAACAAAGATTCTTGGAAGCTTCCATGGCTTATGTTTCTGGAAATCCAATCTTGAATGATGAAGAATATGATAAGCTCAAACTCAAACTAAAGATTGATGGTAGCGACATTGTGAGCGAGGGTCCAAGATGCAGTCTCCGTAGTAAAAAGGTGTATAGTGATCTCGCTGTAGATTATTTCAAAATGTTATTGTTGAATGTTCCAGCAACCGTTGTTGCTCTCGGACTCTTTTTCTTCCTGGACGACATTACAGGTTTTGAGATCACATACATCATGGAGCTTCCAGAACCATACAGTTTCATATTCACTTGGTTCGCTGCTGTGCCTGTGATTGTATATCTGGCTTTATCAATCACCAAATTGATCATCAAGGACTTCTTGATCTTGAAGGGTCCTTGTCCGAATTGTGGAACGGAAAACACCTCCTTCTTTGGAACAATTCTGTCAATCTCCAGCGGCGGCAAAACCAACACTGTCAAATGCACCAAGTAAGATTTTACCTTCGAATATGGTTTCAAAAGTGTAACATATTACTATCTGATTCTTTGATTATCTCTGTTTTTAGCTGCGGAACCGCGATGGTGTATGACTCGGGTTCTAGGTTGATCACATTGCCAGAAGGAAGCCAAGCTTAAACCCTGTGAGCTAGATGAAGATGGGAAAAGAAGAATGGGTTTTGTCAGAAGCAAAATAGATTCGAAGTTAAATGTATATGTAAGATCTTCCATGTTAGCTCTCTCTCCTTCACATGTTTTCTGATTTGTAAGTATTGTGTGTAAGCAATAAGAGATATATAATATGAGCACTTCTTCATCTACCTTTGTAGATAAAAATATAATCATTACTATAGTTAAATCAAATTGTATACATGAAAGACCAA - >AT4G22890.5
AAAAAAATCAGAAGAAACCTGAGAAGCTCACAGTAAACACATCTTCAACCACAGGTTCATACTTACTGAAAAAAACAGAGGAAAAAAAGGAGCTCCCTTTTCTATCTCTAAGGGAAAATGGGTAGCAAGATGTTGTTTAGTTTGACAAGTCCTCGACTTTTCTCCGCCGTTTCTCGCAAACCTTCCTCTTCTTTCTCTCCTTCTCCTCCGTCGCCGTCTTCGAGGACTCAATGGACTCAGCTCAGCCCTGGAAAATCGATTTCTTTGAGAAGAAGAGTCTTCTTGTTGCCTGCTAAAGCCACAACAGAGCAATCAGGTCCAGTAGGAGGAGACAACGTCGATAGCAATGTTTTGCCCTATTGTAGCATCAACAAGGCTGAGAAGAAAACAATTGGTGAAATGGAACAAGAGTTTCTCCAAGCGTTGCAATCTTTCTATTATGATGGCAAAGCGATCATGTCTAATGAAGAGTTTGATAACCTTAAAGAAGAGTTAATGTGGGAAGGAAGCAGTGTTGTGATGCTAAGTTCCGATGAACAAAGATTCTTGGAAGCTTCCATGGCTTATGTTTCTGGAAATCCAATCTTGAATGATGAAGAATATGATAAGCTCAAACTCAAACTAAAGATTGATGGTAGCGACATTGTGAGCGAGGGTCCAAGATGCAGTCTCCGTAGTAAAAAGGTGTATAGTGATCTCGCTGTAGATTATTTCAAAATGTTATTGTTGAATGTTCCAGCAACCGTTGTTGCTCTCGGACTCTTTTTCTTCCTGGACGACATTACAGGTTTTGAGATCACATACATCATGGAGCTTCCAGAACCATACAGTTTCATATTCACTTGGTTCGCTGCTGTGCCTGTGATTGTATATCTGGCTTTATCAATCACCAAATTGATCATCAAGGACTTCTTGATCTTGAAGGGTCCTTGTCCGAATTGTGGAACGGAAAACACCTCCTTCTTTGGAACAATTCTGTCAATCTCCAGCGGCGGCAAAACCAACACTGTCAAATGCACCAAGTAAGATTTTACCTTCGAATATGGTTTCAAAAGTGTAACATATTACTATCTGATTCTTTGATTATCTCTGTTTTTAGCTGCGGAACCGCGATGGTGTATGACTCGGGTTCTAGGTTGATCACATTGCCAGAAGGAAGCCAAGCTTAAACCCTGTGAGCTAGATGAAGATGGGAAAAGAAGAATGGGTTTTGTCAGAAGCAAAATAGATTCGAAGTTAAATGTATATGTAAGATCTTCCATGTTAGCTCTCTCTCCTTCACATGTTTTCTGATTTGTAAGTATTGTGTGTAAGCAATAAGAGATATATAATATGAGCACTTCTTCATCTACCTTTGTAGATAAAAATATAATCATTACTATAGTTAAATCAAATTGTATACATGAAAGACCAA - >AT4G22890.1
AAAAAAATCAGAAGAAACCTGAGAAGCTCACAGTAAACACATCTTCAACCACAGGTTCATACTTACTGAAAAAAACAGAGGAAAAAAAGGAGCTCCCTTTTCTATCTCTAAGGGAAAATGGGTAGCAAGATGTTGTTTAGTTTGACAAGTCCTCGACTTTTCTCCGCCGTTTCTCGCAAACCTTCCTCTTCTTTCTCTCCTTCTCCTCCGTCGCCGTCTTCGAGGACTCAATGGACTCAGCTCAGCCCTGGAAAATCGATTTCTTTGAGAAGAAGAGTCTTCTTGTTGCCTGCTAAAGCCACAACAGAGCAATCAGGTCCAGTAGGAGGAGACAACGTCGATAGCAATGTTTTGCCCTATTGTAGCATCAACAAGGCTGAGAAGAAAACAATTGGTGAAATGGAACAAGAGTTTCTCCAAGCGTTGCAATCTTTCTATTATGATGGCAAAGCGATCATGTCTAATGAAGAGTTTGATAACCTTAAAGAAGAGTTAATGTGGGAAGGAAGCAGTGTTGTGATGCTAAGTTCCGATGAACAAAGATTCTTGGAAGCTTCCATGGCTTATGTTTCTGGAAATCCAATCTTGAATGATGAAGAATATGATAAGCTCAAACTCAAACTAAAGATTGATGGTAGCGACATTGTGAGCGAGGGTCCAAGATGCAGTCTCCGTAGTAAAAAGGTGTATAGTGATCTCGCTGTAGATTATTTCAAAATGTTATTGTTGAATGTTCCAGCAACCGTTGTTGCTCTCGGACTCTTTTTCTTCCTGGACGACATTACAGGTTTTGAGATCACATACATCATGGAGCTTCCAGAACCATACAGTTTCATATTCACTTGGTTCGCTGCTGTGCCTGTGATTGTATATCTGGCTTTATCAATCACCAAATTGATCATCAAGGACTTCTTGATCTTGAAGGGTCCTTGTCCGAATTGTGGAACGGAAAACACCTCCTTCTTTGGAACAATTCTGTCAATCTCCAGCGGCGGCAAAACCAACACTGTCAAATGCACCAAGTAAGATTTTACCTTCGAATATGGTTTCAAAAGTGTAACATATTACTATCTGATTCTTTGATTATCTCTGTTTTTAGCTGCGGAACCGCGATGGTGTATGACTCGGGTTCTAGGTTGATCACATTGCCAGAAGGAAGCCAAGCTTAAACCCTGTGAGCTAGATGAAGATGGGAAAAGAAGAATGGGTTTTGTCAGAAGCAAAATAGATTCGAAGTTAAATGTATATGTAAGATCTTCCATGTTAGCTCTCTCTCCTTCACATGTTTTCTGATTTGTAAGTATTGTGTGTAAGCAATAAGAGATATATAATATGAGCACTTCTTCATCTACCTTTGTAGATAAAAATATAATCATTACTATAGTTAAATCAAATTGTATACATGAAAGACCAA
CDS Sequence
Protein Sequence