Gene Details:

• Gene ID: AT4G22140
• Gene Symbol: EBS
• Gene Name: EARLY BOLTING IN SHORT DAYS
• Description: PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein;(source:Araport11)
• TAIR Accession: locus:2120693
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT4G22140.1     AT4G22140.2     AT4G22140.3

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020038  — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0020137  — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)

Gene Ontology:

• GO:2000028  — involved in — regulation of photoperiodism, flowering
• GO:0009911  — acts upstream of or within — positive regulation of flower development
• GO:0048579  — involved in — negative regulation of long-day photoperiodism, flowering
• GO:0005634  — located in — nucleus
• GO:0005515  — enables — protein binding
• GO:0035064  — enables — methylated histone binding
• GO:0009791  — involved in — post-embryonic development
• GO:0009845  — acts upstream of or within — seed germination
• GO:0045814  — involved in — negative regulation of gene expression, epigenetic
• GO:0003682  — enables — chromatin binding
• GO:0000976  — enables — transcription cis-regulatory region binding

Function-related keywords:

• shoot axis apex ,  leaf lamina base ,  shoot system ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  inflorescence flower pedicel ,  cotyledon ,  petiole ,  hypocotyl ,  leaf apex ,  collective leaf structure ,  pollen

Literature:

• early bolting in short days: an Arabidopsis mutation that causes early flowering and partially suppresses the floral phenotype of leafy.   DOI:  00-0536 ;  PMID:  11340178
• EARLY BOLTING IN SHORT DAYS is related to chromatin remodeling factors and regulates flowering in Arabidopsis by repressing FT.   DOI:  10.1105/tpc.012153 ;  PMID:  12837946
• Changes in gene expression in response to altered SHL transcript levels.   DOI:  10.1023/B:PLAN.0000023661.65248.4b ;  PMID:  15082927
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• EARLY IN SHORT DAYS 7 (ESD7) encodes the catalytic subunit of DNA polymerase epsilon and is required for flowering repression through a mechanism involving epigenetic gene silencing.   DOI:  10.1111/j.1365-313X.2009.04093.x ;  PMID:  19947980
• Auxin and ethylene are involved in the responses of root system architecture to low boron supply in Arabidopsis seedlings.   DOI:  10.1111/j.1399-3054.2011.01459.x ;  PMID:  21338369
• Chromatin-dependent repression of the Arabidopsis floral integrator genes involves plant specific PHD-containing proteins.   DOI:  10.1105/tpc.114.130781 ;  PMID:  25281686
• Chromatin Immunoprecipitation Assay for the Identification of Arabidopsis Protein-DNA Interactions In Vivo.   DOI:  10.3791/53422 ;  PMID:  26863263
• INCURVATA11 and CUPULIFORMIS2 Are Redundant Genes That Encode Epigenetic Machinery Components in Arabidopsis.   DOI:  10.1105/tpc.18.00300 ;  PMID:  29915151
• AGAMOUS-LIKE67 Cooperates with the Histone Mark Reader EBS to Modulate Seed Germination under High Temperature.   DOI:  10.1104/pp.20.00056 ;  PMID:  32576643
• Crosstalk of Cytokinin with Ethylene and Auxin for Cell Elongation Inhibition and Boron Transport in Arabidopsis Primary Root under Boron Deficiency.   DOI:  10.3390/plants11182344 ;  PMID:  36145745
• early bolting in short days: an Arabidopsis mutation that causes early flowering and partially suppresses the floral phenotype of leafy.   DOI:  00-0536 ;  PMID:  11340178

Sequences: